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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0328100 |
| Transcript ID | LotjaGi1g1v0328100.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr|I1KBS4|I1KBS4_SOYBN Ferrochelatase; Found in the gene: LotjaGi1g1v0328100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78274776..78279080) extracted from Lotus japonicus Gifu genome v1.2.
TGTGGAAAAAGATGCTTTAATCATATAAAATTTTCCTTCTATATGTCATTTATTTTATCACTAGATGTCTCCTGAAGCGT ATATCTTTTTCGCTTTCATAGGTCGTTGCCACAGCCAATGTTTACTTCCCAAAAGATTTACTGCTGTTCTGGAGCCGATA TGGAGGCGTCTGTTAACACTAATCCCATGAAACTTCACATAGAAACCAGATGTTCTCCGCGATGGTTTGAAGCACAACCC TTGATTTCTAACCAATCACTCAACAAAAACTTGTTCTCAGTGCGAGCTTTAGCAACTCCAACAGCTCAAGATGTTTCTGA TACAACTCTTATTGGTGATGACAAGACTGGAGTGTTATTACTAAACCTTGGAGGTCCAGAGACTTTAGAAGATGTGCAGC CTTTTTTGTTTAACCTTTTTGCTGACCCGGTAATAGTAATACTCACACACTTCACTTTGAGCTGTCCTGTTCAACCCTCT CTGTTCCTTTAGGTTGAGATTGTCCTACACTAACAATTTCTCATGATATTAGTTATGTTTTATGTATAATCACACAGGAT ATTATACGATTTCCTACCGTATTTAGTTTTCTTCAAAAGCCATTAGCCCAATTTATATCTGTTGCAAGGGCCCCAAAGAG CAGAGAAGGCTATGCTTCAATTGGTGGGGGGTCTCCTCTTAGACGTATAACTGACGAACAGGCATGGGTCTTCCTGCTAT CTTTTCCTTTTTATTTACTCTCGAAATCATACATAGGAATTGGAGACTTCAAATTTCAATTGTCGGAAATTGAACTAATC ATATTTGTGAAGGAGTTCTTCTAGGATTTGTTACCCTGTATATGTACCTGATGTATGAAAATTTTCTATTGCCAATTTTC CCAGCTTTAGATTTTGCAAAGCGAAATAATAGCACAACAGTATTCCAAAAACTGCAAAGATCTTGTAATAAGTCAATGTC ATGTATATTTTAATTCATGCAGCTGTTGTAGTACGAATTACTTTTATGTGGTTACTGCTGAATTTTTTTTTTTTTTCTCT CCAGGGAACTTATATTAACCATCTTGTACAATTTTGTCACCTCATCCTTAATCTTTTTACAACCATTTCAATCAAACTTT CGATATTTTCACATATCCATTGACATTTTACAGATTTTCATTTTTTTTTTGCTGATGTTTTCAAAACTTTCCAATGATGA TTTGGGATACGTAAGAACCATCATTCCATTAAGTTCTCGTTTGACTCTATTATTTTTCTACCTTACTGCACAGGCTGAAG AGTTGAGGAAATATCTTTGGGCAAAGAATGTCCCTGCTAAAGTGTATGTTGGCATGCGGTACTGGCATCCATTCACTGAA GAAGCTATTGAACAGGCATTTGATCATCCTTTTCTAATTGCATAATGTAAACTTGAATAGAATTTGATCAACATTATGCC ATTGGTGGATTTTCTCAGTCTCACCTGTTTTCATCCTACAGTTTGAGTTAAAAAATGTTACTGTATGCTTAATTCTTAAA TAAAGAAGCATGCAAAATTTTCAAAATAGGGCTACTCAAAGCAATTGTTTTTAATCTGCTTTATTGAGTGGCTTGATGCA GCCGCTACTTTTATCCTTATGAAGGTATTTCGTCATGGATAGCTTAGATCTGAGTTCTAAACTTGTTGTTAACCCACTGG TACAACCGTACCAGTTAGCTTGAATTATCTTTGTGCACACAATCACACCTGTCAATGTGAAAAAAAATTGAGCTCTGACT ATTAGAAACTATTGCTTTTCCTAAGGTATAAAATTTGTTCTTGTTGGGACTATTGAAGGTTGGTATGTCAAAAACTCATT CAATTTTATGCAGCATAACAGGTTATTGTATGCTTCTTTCTTTAAACTGATTCCTGCCTTAAAGTTATGTCAAAGTCATT TGCCTTTGAAAGGTGAACTACTATTTTGTGGGAAGTAATAATGCAGGCACAGAAACAGGTCATGTTAATAGTATTTTTAT TTTTAAAATCTCTTGATAAAAGAAGAAATTTTTAAAATGATCGAACAAACCAGGAATTCCAAAAGTTAGATCTTGTAGTT TTATTGGTACAATTTTACATAATTTGATCTGTTTGTGACTTCTTCCAAACCTGTTTATAATTTAGTTTTCCTTTAAATAA ACTGTTCAGATTAAAAGGGATGGAATTACAAAGCTTGTCGTTCTTCCACTTTATCCACAATTTTCCATATCAACCAGTGG CTCAAGCTTACGCCTACTAGAGAATATATTCCGGTGATTACTATAAGAATATTGTTATCACCTTTATTATACATCAAATA TATAAATTATTGAGCATTATTTAATGTTATGAATTGTTAATTGGTTCTTCAGAGAGGATGAGTATCTGGTCAACATGCAG CACACAGTAATACCTTCGTGGTATCAACGTGAAGGGTACATAAAAGCCATGGCAAATTTAATTGAAAAGGAGCTGAAGAG TTTTGACTGCCCCGAGGAGGTGGAGTTTTTTTTTTCTTTTTCTTTGTTAGTTTTAATGACTTAGAAAAGAAAGGGTGGTT CCTTGAATTTTTCTGTTGTAATTGACTAATTGTCATTCTTATCGTATAAATGAAAGTTAGCATCATACTTTACACAGTCA ACATTTCAGTTATTTCTGGTTTGGGTAACAGAAAGAGTAACCTACCATACTTGGTTTGATTAGCATTTATGGTATCTTGG AGATATTGGAAATTTGGAATGCCATTATGCCCAAAAAAATTGTTGTTTCATAGAGATTTCTATGTCAACAATTCTGGTTA TTCCTTTTAATCTTTGTTTGGTGTTGCTGAGGAGTACTTCCTGCAATCAAGGTACTCTTGTTTAACTGTTAGCGTGTATG CTTCTGAGCCCGAGCAGTTCATGCCCAGTGCAGGTCATGATGTTCTTTAGTGCACATGGCGTGCCTCTTGCTTACGTGGA AGAAGCTGGCGATCCATACAAGGCAGAGATGGAGGAATGTGTGGATTTGATCATGGAAGAACTTGAGACAAGGAAGATAA CTAATGCCAGCATCCTTGCTTATCAGGTAACTACTTTGTCTTTCTGTGATTGTTTCTTCTGTTTCGTCAACTTTTTCTTA GATTGTGTTAGTTTACTACTATATTGTCCTCTAATAAGTCATAATTGGAAATTCCATCAATTGAATGCTCCACTAGGCAA TAATGTTTTGAGCAGATCATGAAGTTCACACTGCTTTCAATACCACTTTCTATGTATTTCTAACAATTGACTATAATTCT TTTTACAGAGTAGAGTTGGACCAGTCGAATGGTTAAGACCCTATACAGACGAAACAATAGTTGAACTTGGAAAAAAGGGA GTGAAAAGTCTGCTGGCTGTTCCAATTAGGTAAATGTTAGTTTACTCCTATCTCAATCATCTTCCTTCTTTCTTTATCTC TCTCCCCCTCTTTCTCAAACCTGCAAACAGAGTAAGCGACTAATATTTTTTCACTCGTGCTTAATTCACAGCTTTGTCAG TGAGCATATTGAAACTCTTGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTACAATCCGGTATAGAAAAGTGGGGCC GTGTTCCAGCTCTAGGATGTGAACCCAGCTTCATTTCTGATTTGGCAGACGCCGTTATTGAGAGTCTCCCATATGTTGGT GCCATGGCCGTTTCAGACCTTGAAGCACGACAGGTACTCTTTCCAACTCCCATATACACATATCTTTCATACAAGAAAAT AATTATCTACTGTTCTCCTTGGAGTTGTTCCAATTTTATCGGATTTCCCCTAAGGGTATTGTAAGTGGCATAGTGGTCTT GCTTTGATTATGTTTAAATTGTTCCCACAATCTGTTGTTTGATCGAGCTCGATGACATTGCCGACATCACTTAGTGGATA AGGATTTTGGCGTTGTTGCTGTAGTTCTCTTTGGAGTTGTTATTGAAAGACACACTTCTTCCCTTTCAAACACTTCTCAT AGAGATTTTTGTAATAGTATATGTTGGAGTTACATTGTTGCATCTTGTGATCTAATAAAAAAGTTTGGACTCTTTGGCAG TCATTGGTTCCCTTGGGAAGTGTAGAAGAGTTATTGGCTACATACGACTCGAGACGTAGGGAGTTGCCACCGCCATTTGT AGTGTGGGAATGGGGTTGGACAAAGAGTTCTGAAACTTGGAATGGAAGAGTAGCTATGCTGGCTTTCCTGCTTCTTATGT TTTTTGAAGTCACTACAGAAGGGAGTTTTCTGCACCAGTGGGGAATATTGCCCTCACTTAGGTGA
CDS sequence (LotjaGi1g1v0328100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTACTTCCCAAAAGATTTACTGCTGTTCTGGAGCCGATATGGAGGCGTCTGTTAACACTAATCCCATGAAACTTCA CATAGAAACCAGATGTTCTCCGCGATGGTTTGAAGCACAACCCTTGATTTCTAACCAATCACTCAACAAAAACTTGTTCT CAGTGCGAGCTTTAGCAACTCCAACAGCTCAAGATGTTTCTGATACAACTCTTATTGGTGATGACAAGACTGGAGTGTTA TTACTAAACCTTGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCGGATATTAT ACGATTTCCTACCGTATTTAGTTTTCTTCAAAAGCCATTAGCCCAATTTATATCTGTTGCAAGGGCCCCAAAGAGCAGAG AAGGCTATGCTTCAATTGGTGGGGGGTCTCCTCTTAGACGTATAACTGACGAACAGGCTGAAGAGTTGAGGAAATATCTT TGGGCAAAGAATGTCCCTGCTAAAGTGTATGTTGGCATGCGGTACTGGCATCCATTCACTGAAGAAGCTATTGAACAGAT TAAAAGGGATGGAATTACAAAGCTTGTCGTTCTTCCACTTTATCCACAATTTTCCATATCAACCAGTGGCTCAAGCTTAC GCCTACTAGAGAATATATTCCGAGAGGATGAGTATCTGGTCAACATGCAGCACACAGTAATACCTTCGTGGTATCAACGT GAAGGGTACATAAAAGCCATGGCAAATTTAATTGAAAAGGAGCTGAAGAGTTTTGACTGCCCCGAGGAGGTCATGATGTT CTTTAGTGCACATGGCGTGCCTCTTGCTTACGTGGAAGAAGCTGGCGATCCATACAAGGCAGAGATGGAGGAATGTGTGG ATTTGATCATGGAAGAACTTGAGACAAGGAAGATAACTAATGCCAGCATCCTTGCTTATCAGAGTAGAGTTGGACCAGTC GAATGGTTAAGACCCTATACAGACGAAACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTGGCTGTTCCAAT TAGCTTTGTCAGTGAGCATATTGAAACTCTTGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTACAATCCGGTATAG AAAAGTGGGGCCGTGTTCCAGCTCTAGGATGTGAACCCAGCTTCATTTCTGATTTGGCAGACGCCGTTATTGAGAGTCTC CCATATGTTGGTGCCATGGCCGTTTCAGACCTTGAAGCACGACAGTCATTGGTTCCCTTGGGAAGTGTAGAAGAGTTATT GGCTACATACGACTCGAGACGTAGGGAGTTGCCACCGCCATTTGTAGTGTGGGAATGGGGTTGGACAAAGAGTTCTGAAA CTTGGAATGGAAGAGTAGCTATGCTGGCTTTCCTGCTTCTTATGTTTTTTGAAGTCACTACAGAAGGGAGTTTTCTGCAC CAGTGGGGAATATTGCCCTCACTTAGGTGA
Protein sequence (LotjaGi1g1v0328100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFTSQKIYCCSGADMEASVNTNPMKLHIETRCSPRWFEAQPLISNQSLNKNLFSVRALATPTAQDVSDTTLIGDDKTGVL LLNLGGPETLEDVQPFLFNLFADPDIIRFPTVFSFLQKPLAQFISVARAPKSREGYASIGGGSPLRRITDEQAEELRKYL WAKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLENIFREDEYLVNMQHTVIPSWYQR EGYIKAMANLIEKELKSFDCPEEVMMFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNASILAYQSRVGPV EWLRPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALQSGIEKWGRVPALGCEPSFISDLADAVIESL PYVGAMAVSDLEARQSLVPLGSVEELLATYDSRRRELPPPFVVWEWGWTKSSETWNGRVAMLAFLLLMFFEVTTEGSFLH QWGILPSLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 458 | 458 | - | – | |
| PANTHER | 46 | 478 | 433 | 1.8E-206 | ||
| TIGRFAM | 75 | 400 | 326 | 1.4E-112 | ||
| Hamap | 75 | 400 | 326 | 36.391 | ||
| SUPERFAMILY | 75 | 406 | 332 | 2.94E-106 | – | |
| Pfam | 76 | 399 | 324 | 1.8E-110 | ||
| Gene3D | 76 | 400 | 325 | 5.7E-123 | – | |
| CDD | 77 | 239 | 163 | 1.68103E-70 | ||
| Gene3D | 238 | 381 | 144 | 5.7E-123 | – | |
| CDD | 245 | 383 | 139 | 1.97419E-56 | ||
| ProSitePatterns | 266 | 287 | 22 | - | ||
| SUPERFAMILY | 444 | 484 | 41 | 4.58E-10 | – | |
| Phobius | 459 | 479 | 21 | - | – | |
| Phobius | 480 | 489 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ferrochelatase activity | Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX. | ||
| Biological process | Heme biosynthetic process | The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors. |
Expression pattern of LotjaGi1g1v0328100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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