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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0545100 |
| Transcript ID | LotjaGi1g1v0545100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA ligase; TAIR: AT1G66730.1 DNA LIGASE 6; Swiss-Prot: sp|F4HPZ9|LIG6_ARATH DNA ligase 6; TrEMBL-Plants: tr|G7KV95|G7KV95_MEDTR DNA ligase; Found in the gene: LotjaGi1g1v0545100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107437605..107451843) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTTATTTCTATCTATCTATTGAGTGTGTAAGTGTATTAGGTGTGAAGAAATTTTTTCCCCAAATTCTCTGGTTTTGT GGTGAACACAAGTTTTGTACTTTTGGCGCCTTAACTACAAACAACCAGCTTCTACAATCAAACCCAATGATATAAAGCAG AAACAGAAACTGCTTCCCATTCCCCATTCCTCATCATCATTGAGCCAAAACATGCTTAACATTTTCCTCACCAAGTCTGA ACCTTTCATTCATTTTCTCTTTCTTTGAAATGGAAAATTCCCAATTCAAACCCAAAACCCTAAATCTAGACTCCACCCAC TTGTTCCTCTCCGCTCTCCAATCCCTCCAACTCCCACCGCAAACCTCCTCCTCCACCACCACCACCGCCATTCCACACTC CAAACTCATCCCCAACACCCGCTTCCTCGTCGACGCCTTCCGCCACGGCAGCAGCGGCGGTGGTGGCTCCTTCTCCGTCG CCTACTTTCTCTCCCACTTCCACTCCGACCACTACGCCGGCCTCTCCCCTTCCTGGTCCCACGGCGTTGTCTTTTGCTCC CCCACCACCGCAGAACTCCTCCTCCACGTCCTCCGCGTCCCCTCCCCCTTCGTCCACCCTCTCCCCCTCAACCAACCCGT TTGTATTGATGGTTCCGTGGTCACCCTCATTGACGCCAACCACTGCCCTGGTGCTGTCCAGTTCCTCTTCGAGGTCCCCG CTCCCGACGGAACCTGCCGCAGGTAGTGCAAGCATTCTGAGCTCAAGTTGATTTGAGTTAATAATAATGAAATTAATGTA AATGTGTTAAGTTTTTCCAAAAATGGATGAAAAACGTTGAGGGGCGCGTTCAAAAGAGTGTATTGCTAGCGCTCATCAGA ATCAAATTAGTTATTTAATCAGATGACTTTAGCCATATTATCATACTAGCTCTTAAATAATTGAAATTGCCTTTTGAATA TATATTTTGTCAGGCAATTTGGTTCTTGGATAGAGTATCTTAGGGACTGATAACAAGACATTATTCAAGGACTTTTTATG TACAATGTCCAATTTTGCAGGACGGATGAAAAATTATATCTTTTATGGATTAGTCTGACTATTTACTTATTAGAATTTGT GTTCTCATCTGAAAATTATATAGGAATAGGAACAGCTTGTTCAGACAAGCAATCTAACTATCTTCTCCTCCAAGGGTTGT TAAGCACGACTAACTCTATAACTGCCAGGTCGATTAATTAAAGCTGACATGAGTGGTGTTGCATTTTATTTCTGATGAAG TGTCTTCTAATGGCAGGTATGTTCACACGGGAGATTTCCGGTTTTGTCGTTCGATGTTGGCTGAGCCTGCGCTTGCTCCT TTTGTTGGTGCCGATGCTGTGTTTTTGGACACCACTTACTGTCACCCGAAGTTTGTGTTTCCTGCACAAGAGGAGTCTGT TGATTATGTTGTTAATGTTGTGGGTGAGTGTGACGGTGATGATGTCTTGTTTCTGGTTGCTACTTATGTTGTTGGGAAGG AGAGGATTTTGCTTGAGCTTGCGCGAAGATTTAACAAGAAGGTGCTGGTGGATGCTAGGAAAATGGAGGTTTTGCGAGTT CTTGGGTATGGGGAAAGTAGTGAATTTACTGAGGATGGATTGGAGACTAACATTCATGTTGTTGGGTGGAATGTGTTGGG GGAAACTTGGCCCTATTTTAGGCCCAACTTTGTTAAAATGAAGGAGATTATGACCGAGAGAGGGTACTCAAAGGTTGTGG GTTTTGTGCCAACCGGATGGACCTATGAAGTGAAACGCAGTCGGTTTGCTGTCAAGTCCAAGGATTCGTGTCAGATTCAT CTCGTTCCTTATAGTGAGCATTCAAACTATGAAGAGCTCAGGGAATATGTAAAGTTTCTGAAACCGAAGCAGGTTATTCC CACCGTGGGTTTAGATGTCGAGAAAAGTGATAGCAAACACGCTAACAAAATGAGGAAGTATTTTGCTGGATTAGTTGATG AGACAGCCAACAAGCAGGAGTTTTTAAAAGGTTTTCGTCGTGGCACCAGTGAAGTGGGTTTAAAGGGTGAGAAGGATGTT AGCGACGTTCTGGAACAAGGACAGATCCAGGAGAAAGAAGTCAAGCCATCTGATGCAGATGGGGAAACGTGTGCAAAAGA TCCTACTTTACTAAATGATGAAGAAAAAGAGAAAATCATTCAAGAACTTAGTTGTTGTTTGCCCTCATGGGTCACTCGAA GCCAGGTGTTAGATCTGATCAGTATCTCAGGGAGCAATATTGTTGAAGCTGTTTCTAATTTCTATGAACGTGAAACTGAA TTTCATGATCAAGTAAATTCTAGTCAAACTTCAGTTTCAACATCCAAGTGCTGCTCATCAGATGACACTGATTCACTTCC AAAGTCATGCCTTAATACAAACAGTACTCCCTTAAATGTTGACATTTTTCCTAGTCAAGACTCTAAATTAACTAAACTGA GGAATACAGTACCAAGTCGCATTTCCCCTGCCAAAAGAAAAAGTAGTGAAAGTAAGCCAAACAAGAAAGTAAAAGTCAAA GCAAAATCAGAATCAAGTGGTTCAAAGCAGTCAACTATAACAAGATTCTTCGGCAAAGTAACGCCTGAGGTGCCTGGTGG GACTCATTCTGATCATGCTGGGTCAAAGCTTGATGAAAGTCCTAAAGTTGAAGAGTTGTTGCAATCTGATGTTGAAAAAT TGTACAAGGATGAGATTGATCAGTTTATGCAAATAATAAATGGAAACGAGTCTTTAAAAAGAGATGCCATCACTATAATT AAAAAGGCAAAAGGAGATGTCAATAAGGCCTTAGACATATATTACTGCAATTCTGGCCATCTTGGTGAAAATGAAATATC AGCTCAAGAGGAGTGCAAAATCGACAGACCTTTAGAAAAGAAGTATGTGTCACAGGAAATGAGAGTTGTACATGATATTT CTGTGCAGAAAGTGTTAAGAAATAGTGTAGATGCAACTCATTTATCTTTACCACCTGAGAAATACAACCCTAAGGAACAT GGTTTGTGTTAATTTTTCCCCAAGTGTCTTGGTTTAGAAGGAGTTTTCGACTTACTGCACTTACTGTTATATACATTCAT TATGTTCAAAATCTGTCTTGTAAAGTATGTTACAATGGCATAAATGAGCAGCTTGTTGGGGAGATGGACAGCCTGCGCCA TATTTACATCTTGCACGAACCTTCAATCTGCTTGAGGAGGAGAAAGGAAAGATAAAAGCTACTTCAATGTTGTGCAATAT GTTTAGAAGGTCCTTTGATACTGATCATAGTCTTTGTATTATCTGTTTTCTCCCTCATTTTTACGGAATAATGAAACAAT TTTACCATTAGTTGGCTGATTTTTGAATATTATCTGCATGTAACTTGTCTATCACACAGTTTGTTGGCCTTGTCACCAGC AGATGTGCTTCCTGCTGTGTATCTATGTACAAACAAAATTGCTGCAGACCATGAAAATGTGGTAGGTTTATTTCTAGTCT TGATAATTTGGAAACAATGGCTTTCGCCATGATTGCACTTTATTTTCCTAGTGGAGGTGAAGAGGAACCCATACTTGTAA TGAATAAAATAGCCATTAAAATCCAGAAGCCAATTCAAAGGTCCCTTTATTGAGAAAAAATTAACTTTTTTTGTAAAAGT ACAGTGTTGTTTCTTCTTGTTAATAATTTTTGTTTCTTTATCTCTTACCGATGATAAATTAACATTTGTTTGACAAGTAT AAGAATCTACTATTTGGCAATAAAGGCTATTATGCACTAAGAAATTTTGATTTGTTATGCAATTCATGCAGGAACTAAAT ATTGGTAGAAGTTTAGTCACTACAGCACTTGAAGAAGCATGTGGAACAAATCGATTGAAAATAGGGGAGATGTATAACAA ATTTGGTGACCTTGGTTGGATGATTGTTCTCATAGTTTTAGACACTTTTTGCTAAACCTACTCAGTCTGACAATTTGGAA TAACTATGAAATAACCTGGGATTGTTATAGGTGATGTGGCTCAAGAGTGTCGTCAAACACAGAGATTGCTTGCACCACCT ACACCACTTCTAATTAAGGAAGTTTTCTCTGCACTACGAAAGATGAGGTATTAACAATCGTTTTGTTTCTTATTGTAACA TTTAACATTACTAGGGATATAATTTACCTCTAAATGGTTTGCTGTAAAAATGTTTAGTTGGGAGTTCTTACTATGAACTT AGGTTCAGGGTAAGGATGTTGGTCACTAGGATTAGCTTTTTGGCAGTCAGAGTTGGTGATATTAACCTTCTCATTGAGTG TAATATCAATTTATGTCTTGTCCTCTTCGTGATCCACACCCTGGGAAGTTGTTCTACATATTTTAAACATTTGAAAGGAG CTCCAGGTTGTGGCATTTTACACAATTAGGAGATCAATTTGTGGTTATGACGTCTTTGTTGGTGGTACTTGTTTCTTGGA ACCAGGGCTCCAAAACCATACAATGATGAATCTAAAGAGACCAAATGTATATATTAAGCCTGGTTGTAACTTGTAACATT TATTTCTCTTACTTTCGCATTTTTCTTCCCTATTAATTCTATCGTTTTCCTACTGCTATTTTGTTCTGTAAACTTTTAGC TTTGTTTTAGATGTTCTTATGTGGTGCTCATCAGTGTACAAACAGGCAATGGAAGCACAGTTCGGAAGAAAGGCATCATC GTTCATCTCATGCGGTCTTGCCGGGAGAAGGAGATGAAGTTTCTTGTTCGGACATTGGTAAATATCTCTTTTTTTTGTGC ATAAAAGTTTAAAAGAAGGGAAGGTTATCACATTTTGAGGTTATGGTATGCCCCAAGCCTCATAAGAGCTTCCATTGGTG TTTATCTACTGTGCACCTTCAAGTTGGAATCTGACAGCTCTGATAGTTCCAATAGTACATGACTTAAAGTAATAGTCTTA ACTTATGTTGGCATGCAGGTTAAAAGGTCAAAAGGTACAATCGTGGACATTGATTTCTTGGACCTCCATTTGCTTTAGTG ATTAAACTCTAAGCAGATTTTAAATGACAAGTCTTTATGTTTATCAGGCTTCTATTGTCCACCTCTTTCATATATGTTGT TAAGTTAGTTCATCGGTAGCCATACCTGGCTAGACAGTATGGTCTTCTCTCTCAATGCATTGTGTGTGTGTGTGTGTGTG TGTGTGATGGTGGCTGATAGTATGGTTCGGTAGCCATACCTGGCTAGGCAGTATGGTCTTGTTAGAACCCAATTGCAAGA TATGGGACTTGAGTCCCACATTGGAATATGGGATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACAACAGC TAGCTTTTGTGGTATGGTTCTCTCAAGGTTCTTATCAATTGGTATCAGAGCCTTCCACCATGTCTCTCAGCTGCAAACGA GCGGCGCGGGTGGTGACGCCGGCATTGCAGTGTCCGCCCAGCTACAATAGCTAGCTTTTGTGCGAGCCCAAGGCCTTATA AACCCCCACATTAGAATTTCATACTTCCAATGTGTGACTCAAGTCCTATACTCTGCAATTAGGCCTTCTCTCTCGACGCA TTGTGTTTCAATGTTTACTATTCTCCCTCTCTCTCTCTCCCTCTCTCTCCATGTGTGTGTGATGATGGCTGATACATAGT ATGTTTCTCAAATGCTTTTTCCCCTAGGTTTTTATCCCTCTGTGCTAGTTTCCTGGTCCTCAAATTTGCGTCTTCTGTAG GTCAGGAACTTACGGATTGGGGCAATGCTTAGAACTGTTTTGCCTGCATTGGCTCATGCTGTTGTTATGAATTCTCGTTC TACTGTGGATCAAGAAGGAACTGCAGATAATTTGAAGAATAAACTTCAGGTCAATTCTGAAATCAATTGTTTTTACCCAT GACCAAGTTTAATTTGCCATTTTACTATCCTGTCTGCTTTTAATGGTCTATGTCATTTTGGTTGCACTAGTTACGTTTCA TTTTCCGTATGTAGGGGTGCTTTCATTAATGTTAGAACCGGAGCTAGGATAGGGTAACTGATAGGGAATAGGGATTTCAG AGACTATACTGGAAAAATAGTGTATTAATTCAGGGGAATCCTGGTATGAATGCCAGAATCCCTTTAAGGAATTACAATAG CAGAAAGGAAATACAGGAAAAAGTGATAACCCAGGAACAGATTCGAGAGCGTTCCTATCTCTCCTAGTCCTAACAGAATT TCTGCCTAACCTCACTCACCCCCCTCTTGGTGCTTTTACACACCACCTGGCCTGATTCTCTGCAGAGAGAATCTGCCAGC TCAGCAATTGGTTACACTACTCATCAGTAGTAGTGGGACTATTGTTTATTCCCACCTTGCCCCTACGCTTGTAAACTTTA GAGAAATCCTTGCTCTTACTTACAGCAAGGTCCCTATCAGTAACCTTATTGGAGATAAGGTTATCGTACAAGGACATCAT CAATATAGTAACTCCTTTAAATCCCTCTATATATCTAGCAAAAAGACACCCTAAGTTTTCCTTTTCAATAGTAGAAGAAA TGTTATCAGATTAGAGGGAAAAAGTTCAGAAACAGAGGATAGTAAATTCTCCATCAAGAAAGGAAAAGAAATTAAGATAA TACAAGATGGTCAAACAAGAAAGCTCATCAGTTATGCAAAGCTTGGCAGACCTACCCTTCTGTTACTTGCTCTGAATTAT TGCTTGTTGAGATCCCATATAGACTAAAGATATGACCAAAGTAGCGTATAGAAATAGCCATCTATTTGCTATGTCCTATG TACGACAAAAATGCTCTAGAAGAAGTAGCCATGTTTATTTTACTAATTATTTCCCTCATCTCTCCAGGTCCTTTCTGTGG AAGTTGTTGAAGCATATAATATTCTGCCAAGTTTGGTAAGTGTTGAATATTTGAATGAGTATTACCTATATATAAATTTT ATGAGGGAAACCATAGCATTATTGCAAACATTAGACTGTTATCTACACTACTCTCTCACTCTCACTCTCTCTCTCTCATA TACTAGAAGATAGGAAGCTAGGCTCTGAGTGTTCCTTTGTTTGTGTTTCTCAATTCTGTCGTTGATGGTGAGAAAGCAGA AAATATGACCAGCTTTAAAAATATGACCAAACACTACGTTGGATATACTGCTGATGTGTGGTTTGTGTGAATATGCTATA GTTTTGTTTATTTTAAATAGTTCAGAATTTATCTTGATGGTCTGTTGTATCTGTTTGGTAAATTCAGACTTGTTGAGAAC AAACTATGTAGTTTTCTCCCTATGTGAGTAATAATGTAGTACTCATGATATTTCAATTTCTCATCATCATTTACTTTATG CAGGATATCATAGTCCCATCTCTCATGAGCAAAGGCATTGATTTTTCGGTTTCAAGTTTATCAATGGTTCCAGGAATCCC TATTAAGCCTATGCTTGCAAAGTATGCAGTATTTAATATATTGGCCCTTTCTTGAAACAATTTTTAATTATATTTCAAGG TTTTTAACCTTCTTTTCTTAACTTACATCTGTACCCATATACTTTGTTAACACCCCTAGTTCTTTATACTTTGTATTTTG CTTCTTTTTTTTCTTCATAGGATCACCAATGGCATTCCCCAAGCATTGAAGCTATTTCAAAATAAAGCATTTACATGTGA ATATAAGTATGTACTATCCTTTAATTAGTTATTTTCCTTTGGCATCTCATTGCATGCAATCATGAACATTAGAAAGCAAG CAATCCTTTAAAATATTGGTTGGAATATAATATTGATGGGTAATGTTGAATAACAAGGAGACAATCGGCATTTGGTGAAT CCACTTAAGGTGTTATTTACATTTTCAAATTGGCAAAATGGTCTTGAAGGTAGGAGTGCTGCCGTAAGGCAGAATCATTG GATTATTGCAAATTTGAAACTCAACTTTCTAACATTTCATCATTAAAATTTCAAAATGCTACTTTGATTTCCAATTTATC TTTAAAAAAATTTACCTTGATATATTGCTGTTTACTTCATTAGTCTGTAGTTTGTGATTGGCAGTTCACATAATTCTAAG CTAGTTCCTGATGCATTATTACATCTGTCGATATTTACAATCAACACATCCCTTTCTTTTATGACCATTTCATAAACTCA ATCTGGCATATTTGATCATATAGTAAACTTATGGTGGGGGAAAACTGGTAACACACATAGTACAATGATTATTTGCATTG TTATAAGGAAAATACAGCAATAAGAAATGAAAATATTCAAATCACTTCATTTTCAAACAGTAAATTTTGTAATTTTAGTT TTATCTCCAACTTGTAAAGTTTATCTAACCCTGAATTTCTTTTGTGGATTTCTTCTGGTCTTGTTTTCTTATTCTACTGG TAATGGTTTTGAACTTGGTGATTTTGTTGAATATTCAGGTCCCTTTGCATTACATGTCTCTCTTTTACAAGGATGAATTG CACCTCTCTTTTGTATCACTTGCTGAGTTGAGTTAAATGTAATTCCAGGTATGATGGTCAGCGAGCTCATATCCACAGAT TAGTTGATGGTTCAATTCGTGTCTTTTCAAGAAATGGAAATGAATCAACTTCTAGATTTCCTGATCTGATTGACATAATT AAGCACTCCTGCAAGCCTGTTGCATCAACTTTCATAATTGATGCAGAGGTACACAAATATTTTCTGCCATAGTATACTTT GTATTTGTTCTTGTTTTCTGCCATAGTATACTTTGTATTTGTTCTTGTTTTCTGCCATGGTATACTTTATATTAGTTCTT GTTATTTAAGTTTCTGTTATTCACTCCTAATTTTGTGGTTCTTGTCCCTTTCAGGTTGTTGGTATTGATAGAAAAAACGG AAACAGAATTATGTCTTTTCAGGAGCTATCTTCACGTGGGAGAGGAAGCAAAGATACTTTAGTTACTGCAGAGAGCATAA AGGTTGGAAATTAGCATGCTTAAAAGAAAGTGAAAAGTATTTATGCCTTAAGCCATAGACACTTCACAAGGAGAAAACAA TTACAAAGTGAAAGGAGGACAACGATTCCTCCTACTCTGTCATCTTTTTGTACATTAAGTAGAATTCTCTAATACTAAGT GATCCCAAACCAACTTGTGAGAAATATTGACACATTAAAAATGAGAATAATAGACATGAAAGATAATACGAAGTAATTTA GGATACAAAAACTAGACAACTAAATTACTACATTTATGAAATGGGTAAACCACCTTTATAATGGAATAAGGCCTTATATG TCCGTAAAATTTCCACATATTCTATAACTTCGTCACTCTTAAATCTTCATTCCTTGCTCAAACATTGCTGATATATAGAA CTATGGTTAATTTAATTTATTGTTTGAAGAATCTGGATGTGAATCGGTAGAGTTGGTTGATCAGTGGACTGGATAATCTT TTATATAACCAATCTATGTGTATAATAACATTAAAGAACCAAGCTGATCCAGAACTCAACAAAAATTCTCTGAAATTGTT TCATTGATCAATGCTAATGTCTTGTGAAATCTGGGGTTGAAGAGTAGTTCTAAGTTTCTCTCAATGTTATTAAGTAAAAT TCCCTAATTGACAATTTGACATAACGCTTCAATCCCATGCCAACACGGTGAAGTGGATAGTATTTTGGTAGTGTTAAAGA AAGTACAATATTTTGGTATATAGTTTTTAAAATATTATTTGTCATTTAGTCCATATAAACCATATTCTTCCTAGGTGCCT TTTTCTTTTAATAAGTTATCACAATCTAAGTATTTTGAAACCTACTGACTGAGGAATACTGATGCTAAGAGCTTTCGCTG ATTGCTCTTCTTTTGTGTTTCAAACTTAGCTTTTATTAATTCCCAGGTTAGCCTTTTGCCCTCTCTCTCTCTCTCTCAAT ATTTGCAAATTCTCTTTCTCTTTCCTTTATTCTCCTTATTACCCCACTGTTGAAATCTGAATTTATGGCAACTTAGCTGC TCTAGATGTCTAAAATGCTACAACACATGCCTTTAGGTATAACATGCAATGTGATCCCTTTGACAGTTTTGATGACTTCA GTTGTTTCTGGATCCAGCCAGGTTAAAGGATTGGGATAGTTTGAATGACAATAATTAGTTTATGGCAGTGTTCTTTTACA TGTTATGGCAAGTTTCATATAAATATCTCAACACAGTGCATGTTGTTATGGTGTGCTCTGTGGACAGTGTCAAACTAATT GTTGTTTCAGGTTTTTATTATTTGGATCAAAACCATTCTTTAAGTATCATAGGGATGTTACATGATTCACTTCCTTAGAA ATTCAGCAGTTTTATTGGCTTATTTATTTGAAGGGTTTAGGATGATAAACATATTTATATATTTGGTATTGTCAAGAACA TGGTTTTAGAAGGATTGGAGAGCTCTATTTAGCTAATGCTTTTTTCTTCTTTATGGAATTTCCTTGTATTTTGGTTTCTT GAGTGGTTTATAAGTGTGAGGACCCATACACCCATTGCCTTAAGGTTTTGGGTGAAAGATGTGATGTCTGGTCCACTTAT GGTTTGCTCTTTAGCCCAATGTGGAGTTTTATCCCCCAGTTTTAAATCATCTCCTTTGTTTGGCTCTTTCTTTGGTCCAA CAAGTGGTATCAGAGCCTCTATGACCGAGAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTGAAGAGTGGAA TTTAATTAAGCACATGGTAGGTGGGCTTGTGCATTTATCCCCGCTTCAAGCCCAAAGGCTCTTGCATGAGGGGGCGTGAT AGAATATAATATAAAACCATTAAAGTAGCCCTTACCCAACAGCTTAAGCTTTTGGGATAAGTGGTTGTTATACAGGTTTC TTATCTTCCTTTGTACTTGTCTAGTTCTCTTCTTAAACTCTCTTTCTATTTGAATTCTCTGGATTTGTTTCTGATATCTT CTGTTCATGCAGGTTGGCATTTGCGTCTTTGTCTTTGATATCATGTTCGCAAATGGAGAGCAGTAATAATTCCAAACTTT CTTTTATGAATTTTATGATAATTAGTTGCAAACTTAGTAGAAAGTCTCGTGGAACACATACAAATGATTCTGTTTGCAAG TGGTCTCTTGAATGCATTGGCCTTGTATGTTTCACCTATAACGGTGGATAGTATAGTACAGATAATAGGGGAGTATAGGC TATACTATACACCTGATAAGCTTTTAGTTTGGCATATTTTAGGCATACCAATGTATGGTGTGCAAGATGCTGTAATTAAT GCTATCTTGTGTATGGATCGTGAAAACCAGATAGGGTAAAAATTTGTGACATTTTCTTATTAATCATGCTAGTGCAGTTA ATCAGTGATGATCAAGATTTTGGATTTTCAGATAGAAGGAAAGTAGGTCTATTTAGGCTGTATTGATTTATTCTTATGAT ATTTAAGACACTCAGGTCATCCTTGTTAAGCAGTTGATATTGCTTTTCAGATACAGTCTTTGCTGACCCATTTGAGTGCT ATTTGCAGGTTATTGGGTTCTCCTCTCCGCCTAAGACGAAAGTGTATACATCTAGTCATCTTATTAAATTAGAAATCTTC TTGATTCTCAGGCAAGACAAAAATGTACTGTGACACATAATTACACTTTTGTTTTAACCCTGTTTTTCTTGGACATTATG CAGATCTGAAGGATTTGTTCTTGGATGAAAAGCCTGGGTATTTCGAATATGCGAAAGAAATAACTGTAAGTGTATTAATT TTTTTTATTGTTCTGAATTAATTATCTAAGTTGTTGGGTGAAGAAACATAAATGATTTTATATTTATATTTCTAGCCATG AATTTTTATTTTATAGTAAAACTCATTTAATGCAGTTATATTCATATGAACACTTCAATTGTAGATTGAAGCAGATGATG CTTGCTTAACATCTGAAGCCACATTAACTAAGATAAATGCTTTCCTGGAAGATGCACTTCGCTCTTCTAGTGAAGGAATT ATGGTGAAAACACTGGACGATGATGCTGGGTATTCTCCATCAAAGCGTTCTGATAGATGGTTAAAGGTAATTATTTTGGC CAGTGAGACTTTGGCTGTTTTGTTTGTATCTGTAATATGTTTCTGAGGCTTCGTTTTGTAGGTCAAGCGAGATTATGTGG AAGGATTAAATGATACTCTTGATTTAGTGCCAATTGGTGCTTGGCATGGGAATGGAAGGAAAGCTGGATGGTAATTTATC ATTTTTCATATTTTTCCACTATCTTTTGAAATTATTGAGATGTTTCACTCAATGAAACGAGAATTAAATTTAAAGTATTT TATTTCACATCACTACATTAGTTCTATTGAGGACTAACTCTTCTGCTTTATTATGTTTGAATATTCGTTGGCACCAGTAC AAACAAATATTAGCACATACTTTAAGACAAAAAGTAAATGAAACTCTCAACTTATTGATTGAGACAAAAATCCGTTCATG TTGCGCTCATCTAGTATCCAAAGACACGCTAAGGTTAACGGTGGAGGCCTAAGAGTGGTTTTAGCAATTCCATTTCCTTG TCATTCAGGCACCAATGATAAGTAAAGAAATTTATGCAAAGGAGAAGTTTTGGGTGAAAGATCTGTGCTATGTACTATCA GAGCTAAATGCTCTGGAGTTGTGAAATAACATTTGTGTTCATAAGTCTATTACTAACTGGGTGATGTGCCTTATGTGATT ACTTGACTTTGTTAACATGAATCAAATGGAAAACGAAATGGCAGAAAAAAGGAATATGCAATCAGTGATTTCATTATGAA TTTTTCTTATAAGAAAGTGAATTACTTCATTGTTGTTTATATGGATCTTTTACTGTTGCAGGTATAGTCCATTTCTTATG GCATGTTTCAATCCTGAAACTGAGGAGTATCAAAGTGTATGTCGCGTGATGTCGGGGTTCTCAGATTCATTTTACATAGA GGTATATATGGTATTGCCTTATTCATTGTATGATTTATTTTAGAAATATAATATAAAATCATTCATATATTTTCACCCAA TAGCTTAAGTTTTTTGGATAGTTAGTTAAGACATAAAACCAGTGCCTCTATGACTAAATAATCCAGAGTTTGATCCTTGT TACCCCCATTTTCTAGGCATTTGCTTTGACCTACTAGCTGCATTTAGCATATACTTGGCTAGAGCGGAGAGAGAAAAGAG TGGTGGTGACGGTGGGAAAATCTTTCAGTACTCCTGTTATACATATTCCCCATCTTAAAGCATAACACCTAACATGTAAA GTAATTTATTCCCCATTATAGTTATTTCTATAATTAAAAAATTATAACTATCACATTTGAGAGAGGTCTACCGTCTTCAG TACTACATGAGTATTGCTCGTAGGGGGTGGGTGCGGAGAAAGAGGAGGATGTTAGTGAGAAGCTAAATCATACAGAAAAT TGGAAAAGTTTTAATTCATATCATGAAATACACGCTGTTGTAACTTGTAACTACACAAGACTAAAGTGGTCCCTTGCCAG TTTTACAACTAATCCAATTTCGAAACATCCGTAAAATGCTGCATTAACTTAAGGTCTACAATGTGCTCACTATTGCTCTC TTTTCCTTTCTGAATTTTTTAACTTGATGGCAATATTCTTTTATCATCACTGACAAGAACACTGACATTGCACTGCAGAT GAAAGAATTCTTCTCTGGAGACAGAGTCTTACTAAAAAAACCACCATATTATCAAACAGGAGAGACACCTGACATGTGGT TTTGTCCAGAACTTGTTTGGGAAATAAGAGGTGCAGACTTCACAGTATCCCCAGTTCATCATGCTGCCATGGGTTTAGTT CATCCATCTCGAGGCATCTCTATCAGATTTCCAAGATTTATTGGCTCTGTGTCAGATAGAAATCCAGAAGAATGTAGCAC AGCTTCTGATATAGTTGAAATGTTTCATTCTCAGACTCGGAAGATGGATGTCACAGCTGATAGTTGAATGTTGATTTATT TTCTGTGTATGAGTTTACTGAAGATGTTTTAATAGTTTGTGTGTACAGTCTATTGTTCTTAACATAGTATCCCTTTTTGG CTTGTAGGCTTCATAGATATGTAGCTTTGTAATATGGGTTTTGTTTCTCCCATATATAACTTCAATGCTCTTTTTAAAAA TCCATTTAATTAAAAAGGTTGCATTTTAATTCATTCAGAAACTCTTTTCAAAATTAAACAAGTGGTTAGCTTTAAGTGG
CDS sequence (LotjaGi1g1v0545100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTGCAATATGTTTAGAAGTTTGTTGGCCTTGTCACCAGCAGATGTGCTTCCTGCTGTGTATCTATGTACAAACAA AATTGCTGCAGACCATGAAAATGTGGAACTAAATATTGGTAGAAGTTTAGTCACTACAGCACTTGAAGAAGCATGTGGAA CAAATCGATTGAAAATAGGGGAGATGTATAACAAATTTGGTGACCTTGGTGATGTGGCTCAAGAGTGTCGTCAAACACAG AGATTGCTTGCACCACCTACACCACTTCTAATTAAGGAAGTTTTCTCTGCACTACGAAAGATGAGTGTACAAACAGGCAA TGGAAGCACAGTTCGGAAGAAAGGCATCATCGTTCATCTCATGCGGTCTTGCCGGGAGAAGGAGATGAAGTTTCTTGTTC GGACATTGGTCAGGAACTTACGGATTGGGGCAATGCTTAGAACTGTTTTGCCTGCATTGGCTCATGCTGTTGTTATGAAT TCTCGTTCTACTGTGGATCAAGAAGGAACTGCAGATAATTTGAAGAATAAACTTCAGGTCCTTTCTGTGGAAGTTGTTGA AGCATATAATATTCTGCCAAGTTTGGATATCATAGTCCCATCTCTCATGAGCAAAGGCATTGATTTTTCGGTTTCAAGTT TATCAATGGTTCCAGGAATCCCTATTAAGCCTATGCTTGCAAAGATCACCAATGGCATTCCCCAAGCATTGAAGCTATTT CAAAATAAAGCATTTACATGTGAATATAAGTATGATGGTCAGCGAGCTCATATCCACAGATTAGTTGATGGTTCAATTCG TGTCTTTTCAAGAAATGGAAATGAATCAACTTCTAGATTTCCTGATCTGATTGACATAATTAAGCACTCCTGCAAGCCTG TTGCATCAACTTTCATAATTGATGCAGAGGTTGTTGGTATTGATAGAAAAAACGGAAACAGAATTATGTCTTTTCAGGAG CTATCTTCACGTGGGAGAGGAAGCAAAGATACTTTAGTTACTGCAGAGAGCATAAAGGTTGGCATTTGCGTCTTTGTCTT TGATATCATGTTCGCAAATGGAGAGCAGTTATTGGGTTCTCCTCTCCGCCTAAGACGAAAGTATCTGAAGGATTTGTTCT TGGATGAAAAGCCTGGGTATTTCGAATATGCGAAAGAAATAACTATTGAAGCAGATGATGCTTGCTTAACATCTGAAGCC ACATTAACTAAGATAAATGCTTTCCTGGAAGATGCACTTCGCTCTTCTAGTGAAGGAATTATGGTGAAAACACTGGACGA TGATGCTGGGTATTCTCCATCAAAGCGTTCTGATAGATGGTTAAAGGTCAAGCGAGATTATGTGGAAGGATTAAATGATA CTCTTGATTTAGTGCCAATTGGTGCTTGGCATGGGAATGGAAGGAAAGCTGGATGGTATAGTCCATTTCTTATGGCATGT TTCAATCCTGAAACTGAGGAGTATCAAAGTGTATGTCGCGTGATGTCGGGGTTCTCAGATTCATTTTACATAGAGATGAA AGAATTCTTCTCTGGAGACAGAGTCTTACTAAAAAAACCACCATATTATCAAACAGGAGAGACACCTGACATGTGGTTTT GTCCAGAACTTGTTTGGGAAATAAGAGGTGCAGACTTCACAGTATCCCCAGTTCATCATGCTGCCATGGGTTTAGTTCAT CCATCTCGAGGCATCTCTATCAGATTTCCAAGATTTATTGGCTCTGTGTCAGATAGAAATCCAGAAGAATGTAGCACAGC TTCTGATATAGTTGAAATGTTTCATTCTCAGACTCGGAAGATGGATGTCACAGCTGATAGTTGA
Protein sequence (LotjaGi1g1v0545100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLCNMFRSLLALSPADVLPAVYLCTNKIAADHENVELNIGRSLVTTALEEACGTNRLKIGEMYNKFGDLGDVAQECRQTQ RLLAPPTPLLIKEVFSALRKMSVQTGNGSTVRKKGIIVHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMN SRSTVDQEGTADNLKNKLQVLSVEVVEAYNILPSLDIIVPSLMSKGIDFSVSSLSMVPGIPIKPMLAKITNGIPQALKLF QNKAFTCEYKYDGQRAHIHRLVDGSIRVFSRNGNESTSRFPDLIDIIKHSCKPVASTFIIDAEVVGIDRKNGNRIMSFQE LSSRGRGSKDTLVTAESIKVGICVFVFDIMFANGEQLLGSPLRLRRKYLKDLFLDEKPGYFEYAKEITIEADDACLTSEA TLTKINAFLEDALRSSSEGIMVKTLDDDAGYSPSKRSDRWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMAC FNPETEEYQSVCRVMSGFSDSFYIEMKEFFSGDRVLLKKPPYYQTGETPDMWFCPELVWEIRGADFTVSPVHHAAMGLVH PSRGISIRFPRFIGSVSDRNPEECSTASDIVEMFHSQTRKMDVTADS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 207 | 207 | 5.75E-58 | ||
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 606 | 606 | 0.0 | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| Gene3D | 1 | 226 | 226 | 3.5E-74 | ||
| PANTHER | 1 | 606 | 606 | 0.0 | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Pfam | 2 | 154 | 153 | 1.8E-31 | ||
| Phobius | 8 | 15 | 8 | - | – | |
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 607 | 588 | - | – | |
| TIGRFAM | 36 | 594 | 559 | 2.2E-121 | ||
| CDD | 215 | 447 | 233 | 3.4248E-108 | – | |
| SUPERFAMILY | 218 | 450 | 233 | 3.17E-42 | – | |
| Pfam | 224 | 444 | 221 | 3.0E-46 | ||
| Gene3D | 235 | 448 | 214 | 4.1E-63 | – | |
| ProSitePatterns | 248 | 256 | 9 | - | ||
| Gene3D | 253 | 384 | 132 | 4.1E-63 | – | |
| ProSiteProfiles | 335 | 482 | 148 | 34.702 | ||
| Gene3D | 449 | 607 | 159 | 4.9E-58 | – | |
| SUPERFAMILY | 453 | 597 | 145 | 4.45E-41 | ||
| CDD | 453 | 596 | 144 | 3.34257E-82 | – | |
| Pfam | 470 | 577 | 108 | 7.6E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA ligase activity | Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+. | ||
| Molecular function | DNA ligase (ATP) activity | Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | ||
| Biological process | DNA ligation involved in DNA repair | The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair. | ||
| Biological process | DNA biosynthetic process | The cellular DNA metabolic process resulting in the formation of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one. |
Expression pattern of LotjaGi1g1v0545100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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