Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0556600 |
Transcript ID | LotjaGi1g1v0556600.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|K7KHD4|K7KHD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108866441..108876031) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGTGATTATTTCGCGTGACCTTTCCTCTCCTCCGCTTAACCAAACATAATAAGAATTAAAATCCCTCCCTCCTCCTC CCCCTCAACCAAACACACCCTTCCTTCTCCCACTTATAAAACCAATAGAAGTTCATTTTCATCACAAAATCCAACCCCCC AAAATCTTTTCATTTAAATTCCCTACAAACAAAAGAAGCGTACATGTATTGAGGTCTCAAGTCCCAACTCTCTGTGCGTG GAAGCCATCCCTTCGTTCACGGTTGATCCGATTAGGTATTGATGTTGTTCTTCTTTTACAGTTCGCAATTTCTTTCCTGA CATTGAAGGTTCAAATTACTGTCTACTTTATGGCCATAGGGGTTTAACTGTATATGTATTTTACCGTATTATAGATGCTG TTGCCATTAACTCTGCGTTCAATCCTGTATATTGCATAAATTTAGTTTTATGAGGAATGGAAACATTGGGATTTTTACCA AAGAAAGAGGATTTGGAATTGGAACCTGGTGAGATGCATAGGTTTTATCTTATATCTGGTAGGAAGCCATCATCAAGAAC TTTCCGAAATCGCCTTCTATTTAAATAAAGAAGCTATTCTTTCCATCTGCTTTGGGAAGTTTTGATGGATCATAAGAGTT CTGCCATGGTGGTTCATATTTGTGAATTGTGAATCTCCTTTTCCTTGCTTCAAATAGATTCTAATTGGTCATGCGATTTG AATGGCATTTCGCAAATCCTGAGATCAACCACATGTGCTTCGTGCTAGGATTGGGCGATTGGCATAATATGGAACAATTA GGTTTAGGGTTAGTTGGTAGTCTATCTTTATTTCTTCAGTAGGGTTAGTTTATTAGAAATAGGAGTACCCTCCTTAGATT AGAGTATGAATTGAATTGAATAATAGAGTTTGTAAAGAGATTTTCCCTTGGAAGTGGTTTCCCCTTCGAAAGAAGGTTTT CCTTGTTTGAATCCATTAGGATTGTTTTCGTCTATCATCTCTCTTCTTCTCTTCTCTCTTTTTTTATATTTGCTATTAGG TTATTTCCTAACCGAACAATTGGTCCGACCTGCCAGAGCATCCAACCACCACCGAGCACCACTATTGCAGGGTTCTAAAT ATTGGGCCTAGTTAAGTTGTGGGCAGGAGTTTAGTTTATTTGTATCTGTTAGTTGGTAGTCTATCCCTATCTGAAATCTA TCTTTATTTCTTAGTAGTTAAGTCTATCTTTATTTCTTTAGTAGTGTTAGTGTTGAGTAGTCTCACATTGACTAGAGATA TGACCAAGATAACCCTTATATATGGGATGGCAATCCTCAACTCTTGAGCTAGCTTTTGGGTTGAGTTCAGCTTCTCAAAT TCTAACATGGTATCGGAGCTTATCCTAGATCCGTTAAGCGGATACCACCCGTATATGGCCACCCGCAAATGTTTATTCCT ACATATTACACGCTCCAGATTCCAGAGGTTCTCCTTGTCTGAATACATTAGAATTGTTTTCGTCTATCATCTCTCTTCTT CTGTTCTCTCTTTTTTATTTCTTCTGTAGGGTTATTTCCTAACCTATAACCTAACAGACACATTGAAAGATTATTTCTTT TGGGAACCGGTTGAATTAGAATATTTGATATAAATTAGAATTTAAGCTTGTTGGGTTGGTTTTCATAGGAACTTGACCGT TGACATATGGGAAAACTATTGGCTCCATTTAATTGAGGAGTTGGAAGTAAAGAATTGTTGTGGGCTTATGCCACTAAATT GTTCTGTTAGAAAACTTGAAAATTAGTGGAGGTTTCTAATCGGTCGATTGAGCAAATTTAACATCCATTATTGGGTTTGT CTTCAAATGATCAATTCTTTGTGTGTGTACATGCACTTAGTCAGGTCTATGTAGAAGGTATTCGTTTAGTTTGCAGGGTG TTGTTAAGCCTCGATCCTGAAATTTTGAAGTTTTCAAATTATAGTAAATTAAAAATTTGAGTCATATGTTTTTTTTATGG CTAAAGATAGTGGTGTTGCTAGTTATTTATGAATGCAAATCTGTTTGCCCTTTTTATCGAGTTGTTTCTAATATTGTTTC CTACTTTTGTTTGTGATTTTCAGATCAGGTGAGCATTAGTGTGTTGACTGGGTGAGATTGGATATTCTTCCAACAGCTCA ATAACCTTGAATTTGATACATGGAAACTCTGTTATCTGGGCTCTTTAACTTTGAGGCTCTGTAGCAATATGCAACATATT CTTTTTTGTGAATTTGATTCAGGTGACAATGTTAATACAACGTTCTGGTTTATGTTATGTATCTGATGATGGGGAAGATG TTCTTTGTGACCGGATGCCTAGTGGTAAAACTTGGCAGGTGTATTCGAAAGGAAATAAGCACCCTTTTGACTGGTGTAGA AAAGCTGAACCAACGGAAGAGGATAGAAGGAAAACTGGTGATTCTTACAACTCAAACTGTTTAAGTAGCTTTGGCCGGCC ATCAACTGCTGGTATAATGACTGAAAATAGTGCACCTAATATGGTATACAGGAGAAAGAAGCTACGCAAGGGCTCGGTTG CCTCTGCTTTTAATCTAGGATCAACTGATATGCGGACAAGTGCCAATTGCCCTTCAGTCATAAGTTCCTCTGGGCATTTA TCATCAGCTGAGGATCAGTCATCTGGCTTTCAAATCAAGCACAAATTTGAAAAGGTTAAAAATCCTACTGTCCCTTCTGT CTTATTTGATGGAGTAGCCAAGGATACCACACAGAAAAACTTAGGTTTTGACAGTGTAAATGACAGTTGCTCATCTTCTA AGTCAAATATGGAACTTGTTTCAGATTCCTTAGAGATTGAAATGGATGAAACTGGTGAATGCTCCTCCTCTGATGTAATA GTTATGGATGCTACAAGGGAGGAATTGACAGAAATGGATTTCTGCATTAACATTTTAAAAAGCCATGGACTTCTTAAAGG AGATTCTGTTGCAAATAATGTGGCTTCCAGGGAAGGTGCTATTACCCATGGTAATAGTTACTGTTCCAGGTCATGCAAAA TATGCGGTCATTTGGACAGTTCATTGAACATGCTTTTATGTGATCATTGTGAAGATTCATATCATCCATCTTGCTACAAT CCTCGTTTGAAAAAATTGCCAATTGACGAGTGGTTTTGTCATTCATGTCTCAAAAAAAGGCAGAAAGTTCTAAAGGAGAC AATGATCAGATCACCAGGTATCGCAAGTAAAATGGCCAAATGTAGAACTGCCTCAGTTAAGGATGGATTGAATCCCATTC TATTGATGTTGAGAGACAATGAGCCATATAAGTCTGACGTGCGGGTTGGTAAGGGTTTTCAAGCAGAAGTATTTGACTGG TCAGGCCCAATAAGAAGGTATGTTTCGTTTTAATCACAGATGTTTGGAACTACACATTTGTATGATATCGTACTAGGTTT TTCTTAAATTTCTTTCAATATAAGATTTTATTAATTTTAGTTTTTGTGAATTGCTTGGTGTATAATTATGTTCATATTCT ACAGGGAGCTGCATTCTGCATTTCCATTATGTTAAGGTCCTATATTGACTAAAGATATGACTGAATAAATCCTTGGCACT CCTCACTGTTGAACCACTTTTGGGGTCGAGTTAGGCCTAGCTCGAATTTAAGATGATATATGAGCCTATACTATTTATAT TTTTTGGGCCCACTTGTAGATCAGTAGATGTCTAATCCTGCAACCTTCACGCTCCAGGTGTCTAGTTCTGAGTGTGAGGG GTGTGTGTGTTAAAGTCACACATTGACTAGAGGTATAACTAAATAAATCTTTATAAATGGTAAGACAATCCTCACCCTTG AGCTAGCTTTTGGGGTTTAAGTTAGCCCAAATTTTACGTCTAGTCTTGGGCGTGAGTGAGTGTCTTAAGGTCCCACACTG ACTAGAGATATAGCTATTTAAATCCTTATGAATGGTAAGGCAATCCTCACATGTGAACTAGCTTTTGGGTTGAGCTTGGC CTAGCTCAAATTCGTGATGGTATAAAAGTGAATTCTAGATCCGCAATTAGGCCACTCACTGGTGTCCAAAAATATACCAG ACCCCGTGGATTTCCGGGACAATGAAAAAAAAATAATCCTATAATCTCCATGCTCCAAATGTCCTGTCCAGGGCATGAGA GATGTGTGTTAGATCCCACATAGACTACAGATAAGGCCCAAAAAATCTTAAAAAAAGGCTTGGCTAATCCTCACAATGTG AGCTAGCTTGGAGTAGAGTTATAAGACATTGCTATTCTTCATTTATTTTTGAAACGTAGACATTGCTATTCATATATACA CTAAAATTTGCTTTTAGTCCATGTAAAATGTTCAATGTTGGTTTTAGTCATTTTAGTCCCTGAACTTTTGAAAGTCTCGC TTTTATTTAGCCTTTGACATGTGGTGTTAGAAGTCCCACATTGGCTAGAGATATGCCATAGATAGCCTTTATAATGGGTA GAGTAACCGTCAACTCTAGAGCTAGCTTTTGGGTTGAGTTAGTCCTCCCAAATTCTAATATTTGTTTTTTTTTTGTATCT TGTTTTGGTTTTATGCAAACTGATGAATGTTATCCATCTATAATAGACAAGTGCTGCAGTGGCACGGTAATTGTTGTTTT GTATTGGTACAACCTTTTTTATGCATGGTATGGTCCACATTTTGTTAATGACAAGGGCTAAAGTGATGCTATTTCAAAAA ATGAGGGACACAAATGGGTTGTTTTAAAAATCAGGGACAAAAACCATATGTTGATCATTTTATAGGGACTCAAAACCAAT AAGTTTGGCTAGAGACATTTTATTTCCACATATCTTTGTTTTTACTGCACTCCACGAACCTTACTGATTACCTCTATCTT TGTAAATGTCTGGAAATGGATTGGAATAGAGCGGAGGCACTTAAGCTTATACTTCGCCTATAACTTTTAAGCAAATCTTC TGATACAGACTGAGTGAGACAAAATTAGCACATGGACAGCTCATAAGATTTCTGTCCCCTTTAGTTGATGGGAGCATTCC TGTATATTTAGTAACCTATGTTTTCTTTGCTTGGGTGAAGTAAGATTTTCTTATTGTGCATATTTAGTATGTCTCTATCT TTATGCATTGTCATTAGGAATCTATATTAGCCCTTTTTGGGTATTATTACTTTGTTACCAACATTATTTTGTTGTTTCTG GCAGTGATGAAGATGACCTTCCTGAACCTTTAGAAATTAAACCTTCAGAATTTTCTAGACTACAGGTAAAAGTTTTGGTT ATTTGCTTTTCTGATCTGCATTTTATTTGAGTCTCAAAGTGGTGGACAATGCTTTTCTGTTCTGCAGGAAGAGGATATGA GAAATCCAACTAAACTCAGTTCCATTGGTAATTGGCTTCAATGTCAGGAGGTTGTAGATAGAGCCAATGGAACTATATGT GGAAAGTGGCGCAGGCAAGTCATCTCGGGTTGTTCTAGTCTTGAATGATTTTATAACTCATTATTTGTAGGATGATCTTC CTATTCAAGAATTATTTCCTTGCCAAACATGAACAAAAAATATTGTAGGATGGTGCAGTACAAACTTCACTCAAGTTTGT TTCTCATGGGTTTAGGTTTGAGTAGGCAATGAATGTAGCAGTTACATAAAGCCCAAGCAACATTCTTGGCTGATGGATAA TCTCAGCCCATTAATTTAAGGGTTGGATCCGTGCCCTTCTTTAGGTGAGGCTAATTAGCTGTTGCAGAGGAGACTAAAAG AGCCATTTAGAGTGGATTTAAAGGATAAAACGCCTAAACTAGATGGTTTTACTACTGTTGAATGCTGATTTTTAGGGATG TTAGGACTTAGGATATGTTAATAGTTGAATCAGAGAGTGTGAGAAAGAGTGAGAGAGAGAGAAAGTAACAGAATTCTTTT ACTATTCTTATTGAATGAATTGTTACTGAAGATACAATGGATGCTACATTTATAGACTAGCTAAGCAGTCTCTGTTCGAA ACTAACACTAACTAAGGTAACTAGTCTAGCTAAGTACAATAAATACATTATAGATGTTTACTCTATTAGTTAAGGATAGG ATTTGAGTTCTCTCCTGTTTTGAAGAACATAATATTTGTGTTTTGAGAGAGACAATTTTTTTCCGGTAGATCAACCCAAC ATCATAGCTCAGAATTAGTTTTATGTTTTCTCTCTTATAGCATAGTACTCACATTCTCCTAATTAGTTGTTTAAAATGTA TTCAGTTAGGAATAACTAGATGTTTAGAATTCCCAACTTAGGTTGTGCTAATTAGGAACTAGTATTAATTATTAGAGATA ATATGTACACAAATAGCTGAGTCTAGTTAAGTCTCTTTATAATAAGTTGTTGTTCAGCTTCCAGCTGTGTGGCTTATGTA ATAGTGTTAAGAAAGCTTCTTAGAGAAGCTTTCCCAGCTCGATATAAAGAGCTCACTGTACTTTCTGTTATGCAGTTTTC TAATAGCAGTACAATTTCATATCTCTCTCTCTCTCTCCTCTCTAGTTCTTCTTGTTTCCAGTAATTTGTCATTAATACAT GTAAATGTATTTGTAGTTTTGTTCTATTTATCATAAAGGAGAATACAATGAAAGAAGGCATCAAGCCAGAAATCCTTGAC AATAGATGCTATCACCAACACTAATATTGGAGAAACTGTGTATCTACTAGCATTATATTATTATGAAGTCTAAAAATGCA ACTGTTATTTGGGGCTTATGGTTGGTGAGGATGTTGAGAATAACAGAAATTAGGTAGAGAGAGAACAGAGAAACAGAAAA CCAAAATTCTGAAAATTCTGTTATTATTAGTTAACTTCAGAAAGTACATCAAGGGCTCTTATATAGAGCTCAACAGGACA AGCTTCTACACGAAGCTTAAACTAGTTGTACTACACATAATGGCTAACTCGATACACCAAAGTACAATCAGAGTACTCTA ATAGAGGATTGCATGAACTTTCAAGGGTAATTTCTTATACTACCTCTGCTATGGATAAAGGATACTTTCACTTGCCAATG GTTATTTTAGAGGGGTTTCTTTGTTCAGTTTGTTGGATATACAGTGAAATTTGCAAGCTTTGCTTAGCTAATTATCTTGT CTCGGTTGTTTCTGTTCTTACTTTTTCCAGTTCTCTTTCAGAAGGATATCTTATCCTCTTTTTCTATCTGAAATAAGAAA AGATGTGTACCCCTTAAACTGATAAAACATTCTTTGGTTTTGTATCATAGTAAAACCCAAGCTTTGTCTTGTAGAGTAGC GCTAAGGATAAGTAAACGTACTTAATCTTTTTCTTTCCATAAACTCTGAATGTTTATATTGTCTTTTCTTCATCATGACA TACTTTTTCTGCTCATTTCCTTACGATGATTTTGCTACTTTCTTTGTGAAGATGATTCATATACAAAAGGGAAAAATGGG TGTAGTGTGAGAATGAATATCTTGTTGATTGTGCTCAAAACGCCTCAATGTAGCAACTATTTTTGTTTGGCAGGGCTCCA CTTTTTGAGGTTCAAACTGATGAGTGGGAGTGCTTCTGTGCTATTCATTGGGATCCATCTCATGCTGATTGTGCTGTACC TCAGGTGAAATGAGTTTAACTCTCTAGCTTTCTTGTTTCTGTGTTGATCATCTAATCATAAGGTGTTAGTACTTTTTGAT CTTGTGGGAAGACTACTGTATTGTTCCTACCCTGCTAGGCAAGGCAAATCTTCTCTAACATAATATAATATCAGACCAAG TATTATATAATTCTGTAACCTCACTAAAGTCTGTATTATTTCCTTTGAAATTATTAATGATTCAAGTACTTTTTGACCTG AATTAAATATGGCTTAATATGTATGTCCTTGCGTATAGCAGGAGTATAACACAGAGTTATGTATTCAGGGCATTGAACAC AACATAACAGAGTGATGATGGCAACACTGGAAAGAAAAAAAAAAGGAATAGGGACTCAACACCACACAACTTATATTCTA ATGAATATTAATTTTTTTGTATGAAACATTAATATTGATATGTATGAAACGTCTAGGATTTATTGGGATGTTCAAATACA TGGAAATATATTTAAAATGTTTTGTACCGAAATTTAATATATATTAGTTGTCACTGTTGTGTCTTGCATGTACTAGATGT GGACCAATTGTCAGTATCATAAAGTAGAGCGATCTTGAGTTTACTAATACTACTATATAGAGGGGGTAGGTTGATGTGTT GTAAAAGTTATTCGAAGTCTCATTGGTGAATATATCTTTTAATGTCTCCTTTGCATGCCATTTTCCTTTGTTCTTGTTAC TTATTTCTAACGTTTTTCATATGTAAATTCGAACTTGTGTTTCTGAGAAATATTGGTTGTTATAAAATATAAATTCTGCA AACTAGACATTATGAAACTGCATTGAACTTAGTCAGCCCAACCAAATCAGTCTCATTTGAAGGTATAATTTGGTGAATCT TTATTTTTTTTGGAGCTTGCATATTTTTTAGTTTCTGTTTTCTAGTTTAATGTTGCTTTCAACTATATCTTGCTAACCTG CATTGTGGTTGTCATTCTAAATTCCCATCTCATATTGAACACTAGCCGTGTCCCTTTTTATGTGCTGCAGGAGGTGGAAA CAGATCAAGTTTTGAAGCAACTTAAGTACATAGAAATGGTATGCGTAAACTGCATAATTTTGATTGTTGCATTTCTGTCA ACGGAATCTGTACTATAAATTAGTAGTTTGTGTTTCTTGGTTTATACTTCTATTTGTGTGCTATGTGTAAATGATGATTT TTCATGACACTAGTTAACCTTTCTTGATGATTTAAAGGGTATGAGAGCAATTAAATGACATGGTTCATCGATGGGATTTT CTTATTGGGTCCACTTTGAATGACAAGTTAAATATTTTCTAGGAATATTGGAATGTGGGGCTTTGTGTCCACCTTCAAAG ACACCGAGTCTTGTCTTATCTTTTTCTATTTTTCATCATTATTGCATAGCTTATGTGTTTAACAACATGTATGATATGTT TACATTCTTGCTTTACAGCTGAGGCCACGACTTGCTTCTAAACAGAGAAAATCAGATAGCACAGCATAAAGGTGATTGAA GAATCTATAGTGGTGATAAAGCATGATGTTTTGTTCTTGCATATTGTAATTGTACAATATGTTCATACATACCAGATTTA GGATGTGTTCCTAGTCATTTGGTGCCAATGGATTCACAACAATTTTTCATGATCCGAAGTTCTATATTTTTCTGCTTTAA TTCCTTCATTCTTTTTTTGTCATTACTAGTTCCCTCATTATATGTGGTTATAGTACGACTTCTATTTGCTAACGGGTTAA AATGAAACAGAACATTCATTAACTTAGGTGTTTGTTTCAACTTTCAAGTAATGAAAATGCATTCTCAAGAATATGGAGGT TGGGAATGAATGTTCTCAAGTTAATTACAACTCTGAAACACATTCATTAACTTAGGGGTATTTGAAGCTCGATCATCAGA GCTTAAATTATTGTGGTTGTTCTATAGCTTCTATTTACGTGGTTTACTCGTTATGAATTATTGTATTTAAG
CDS sequence (LotjaGi1g1v0556600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAATACAACGTTCTGGTTTATGTTATGTATCTGATGATGGGGAAGATGTTCTTTGTGACCGGATGCCTAGTGGTAA AACTTGGCAGGTGTATTCGAAAGGAAATAAGCACCCTTTTGACTGGTGTAGAAAAGCTGAACCAACGGAAGAGGATAGAA GGAAAACTGGTGATTCTTACAACTCAAACTGTTTAAGTAGCTTTGGCCGGCCATCAACTGCTGGTATAATGACTGAAAAT AGTGCACCTAATATGGTATACAGGAGAAAGAAGCTACGCAAGGGCTCGGTTGCCTCTGCTTTTAATCTAGGATCAACTGA TATGCGGACAAGTGCCAATTGCCCTTCAGTCATAAGTTCCTCTGGGCATTTATCATCAGCTGAGGATCAGTCATCTGGCT TTCAAATCAAGCACAAATTTGAAAAGGTTAAAAATCCTACTGTCCCTTCTGTCTTATTTGATGGAGTAGCCAAGGATACC ACACAGAAAAACTTAGGTTTTGACAGTGTAAATGACAGTTGCTCATCTTCTAAGTCAAATATGGAACTTGTTTCAGATTC CTTAGAGATTGAAATGGATGAAACTGGTGAATGCTCCTCCTCTGATGTAATAGTTATGGATGCTACAAGGGAGGAATTGA CAGAAATGGATTTCTGCATTAACATTTTAAAAAGCCATGGACTTCTTAAAGGAGATTCTGTTGCAAATAATGTGGCTTCC AGGGAAGGTGCTATTACCCATGGTAATAGTTACTGTTCCAGGTCATGCAAAATATGCGGTCATTTGGACAGTTCATTGAA CATGCTTTTATGTGATCATTGTGAAGATTCATATCATCCATCTTGCTACAATCCTCGTTTGAAAAAATTGCCAATTGACG AGTGGTTTTGTCATTCATGTCTCAAAAAAAGGCAGAAAGTTCTAAAGGAGACAATGATCAGATCACCAGGTATCGCAAGT AAAATGGCCAAATGTAGAACTGCCTCAGTTAAGGATGGATTGAATCCCATTCTATTGATGTTGAGAGACAATGAGCCATA TAAGTCTGACGTGCGGGTTGGTAAGGGTTTTCAAGCAGAAGTATTTGACTGGTCAGGCCCAATAAGAAGTGATGAAGATG ACCTTCCTGAACCTTTAGAAATTAAACCTTCAGAATTTTCTAGACTACAGGAAGAGGATATGAGAAATCCAACTAAACTC AGTTCCATTGGTAATTGGCTTCAATGTCAGGAGGTTGTAGATAGAGCCAATGGAACTATATGTGGAAAGTGGCGCAGGGC TCCACTTTTTGAGGTTCAAACTGATGAGTGGGAGTGCTTCTGTGCTATTCATTGGGATCCATCTCATGCTGATTGTGCTG TACCTCAGGAGGTGGAAACAGATCAAGTTTTGAAGCAACTTAAGTACATAGAAATGCTGAGGCCACGACTTGCTTCTAAA CAGAGAAAATCAGATAGCACAGCATAA
Protein sequence (LotjaGi1g1v0556600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIQRSGLCYVSDDGEDVLCDRMPSGKTWQVYSKGNKHPFDWCRKAEPTEEDRRKTGDSYNSNCLSSFGRPSTAGIMTEN SAPNMVYRRKKLRKGSVASAFNLGSTDMRTSANCPSVISSSGHLSSAEDQSSGFQIKHKFEKVKNPTVPSVLFDGVAKDT TQKNLGFDSVNDSCSSSKSNMELVSDSLEIEMDETGECSSSDVIVMDATREELTEMDFCINILKSHGLLKGDSVANNVAS REGAITHGNSYCSRSCKICGHLDSSLNMLLCDHCEDSYHPSCYNPRLKKLPIDEWFCHSCLKKRQKVLKETMIRSPGIAS KMAKCRTASVKDGLNPILLMLRDNEPYKSDVRVGKGFQAEVFDWSGPIRSDEDDLPEPLEIKPSEFSRLQEEDMRNPTKL SSIGNWLQCQEVVDRANGTICGKWRRAPLFEVQTDEWECFCAIHWDPSHADCAVPQEVETDQVLKQLKYIEMLRPRLASK QRKSDSTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 19 | 487 | 469 | 5.5E-170 | – | |
PANTHER | 19 | 487 | 469 | 5.5E-170 | – | |
Gene3D | 196 | 312 | 117 | 8.6E-15 | ||
SUPERFAMILY | 239 | 306 | 68 | 1.17E-14 | ||
ProSiteProfiles | 253 | 303 | 51 | 9.499 | ||
SMART | 255 | 301 | 47 | 3.4E-10 | ||
ProSitePatterns | 256 | 300 | 45 | - | ||
Pfam | 256 | 302 | 47 | 7.7E-11 | ||
Gene3D | 381 | 481 | 101 | 7.0E-8 | – | |
ProSiteProfiles | 400 | 460 | 61 | 11.669 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0556600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…