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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0556600 |
| Transcript ID | LotjaGi1g1v0556600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|K7KHD4|K7KHD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108866441..108876031) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGTGATTATTTCGCGTGACCTTTCCTCTCCTCCGCTTAACCAAACATAATAAGAATTAAAATCCCTCCCTCCTCCTC CCCCTCAACCAAACACACCCTTCCTTCTCCCACTTATAAAACCAATAGAAGTTCATTTTCATCACAAAATCCAACCCCCC AAAATCTTTTCATTTAAATTCCCTACAAACAAAAGAAGCGTACATGTATTGAGGTCTCAAGTCCCAACTCTCTGTGCGTG GAAGCCATCCCTTCGTTCACGGTTGATCCGATTAGGTATTGATGTTGTTCTTCTTTTACAGTTCGCAATTTCTTTCCTGA CATTGAAGGTTCAAATTACTGTCTACTTTATGGCCATAGGGGTTTAACTGTATATGTATTTTACCGTATTATAGATGCTG TTGCCATTAACTCTGCGTTCAATCCTGTATATTGCATAAATTTAGTTTTATGAGGAATGGAAACATTGGGATTTTTACCA AAGAAAGAGGATTTGGAATTGGAACCTGGTGAGATGCATAGGTTTTATCTTATATCTGGTAGGAAGCCATCATCAAGAAC TTTCCGAAATCGCCTTCTATTTAAATAAAGAAGCTATTCTTTCCATCTGCTTTGGGAAGTTTTGATGGATCATAAGAGTT CTGCCATGGTGGTTCATATTTGTGAATTGTGAATCTCCTTTTCCTTGCTTCAAATAGATTCTAATTGGTCATGCGATTTG AATGGCATTTCGCAAATCCTGAGATCAACCACATGTGCTTCGTGCTAGGATTGGGCGATTGGCATAATATGGAACAATTA GGTTTAGGGTTAGTTGGTAGTCTATCTTTATTTCTTCAGTAGGGTTAGTTTATTAGAAATAGGAGTACCCTCCTTAGATT AGAGTATGAATTGAATTGAATAATAGAGTTTGTAAAGAGATTTTCCCTTGGAAGTGGTTTCCCCTTCGAAAGAAGGTTTT CCTTGTTTGAATCCATTAGGATTGTTTTCGTCTATCATCTCTCTTCTTCTCTTCTCTCTTTTTTTATATTTGCTATTAGG TTATTTCCTAACCGAACAATTGGTCCGACCTGCCAGAGCATCCAACCACCACCGAGCACCACTATTGCAGGGTTCTAAAT ATTGGGCCTAGTTAAGTTGTGGGCAGGAGTTTAGTTTATTTGTATCTGTTAGTTGGTAGTCTATCCCTATCTGAAATCTA TCTTTATTTCTTAGTAGTTAAGTCTATCTTTATTTCTTTAGTAGTGTTAGTGTTGAGTAGTCTCACATTGACTAGAGATA TGACCAAGATAACCCTTATATATGGGATGGCAATCCTCAACTCTTGAGCTAGCTTTTGGGTTGAGTTCAGCTTCTCAAAT TCTAACATGGTATCGGAGCTTATCCTAGATCCGTTAAGCGGATACCACCCGTATATGGCCACCCGCAAATGTTTATTCCT ACATATTACACGCTCCAGATTCCAGAGGTTCTCCTTGTCTGAATACATTAGAATTGTTTTCGTCTATCATCTCTCTTCTT CTGTTCTCTCTTTTTTATTTCTTCTGTAGGGTTATTTCCTAACCTATAACCTAACAGACACATTGAAAGATTATTTCTTT TGGGAACCGGTTGAATTAGAATATTTGATATAAATTAGAATTTAAGCTTGTTGGGTTGGTTTTCATAGGAACTTGACCGT TGACATATGGGAAAACTATTGGCTCCATTTAATTGAGGAGTTGGAAGTAAAGAATTGTTGTGGGCTTATGCCACTAAATT GTTCTGTTAGAAAACTTGAAAATTAGTGGAGGTTTCTAATCGGTCGATTGAGCAAATTTAACATCCATTATTGGGTTTGT CTTCAAATGATCAATTCTTTGTGTGTGTACATGCACTTAGTCAGGTCTATGTAGAAGGTATTCGTTTAGTTTGCAGGGTG TTGTTAAGCCTCGATCCTGAAATTTTGAAGTTTTCAAATTATAGTAAATTAAAAATTTGAGTCATATGTTTTTTTTATGG CTAAAGATAGTGGTGTTGCTAGTTATTTATGAATGCAAATCTGTTTGCCCTTTTTATCGAGTTGTTTCTAATATTGTTTC CTACTTTTGTTTGTGATTTTCAGATCAGGTGAGCATTAGTGTGTTGACTGGGTGAGATTGGATATTCTTCCAACAGCTCA ATAACCTTGAATTTGATACATGGAAACTCTGTTATCTGGGCTCTTTAACTTTGAGGCTCTGTAGCAATATGCAACATATT CTTTTTTGTGAATTTGATTCAGGTGACAATGTTAATACAACGTTCTGGTTTATGTTATGTATCTGATGATGGGGAAGATG TTCTTTGTGACCGGATGCCTAGTGGTAAAACTTGGCAGGTGTATTCGAAAGGAAATAAGCACCCTTTTGACTGGTGTAGA AAAGCTGAACCAACGGAAGAGGATAGAAGGAAAACTGGTGATTCTTACAACTCAAACTGTTTAAGTAGCTTTGGCCGGCC ATCAACTGCTGGTATAATGACTGAAAATAGTGCACCTAATATGGTATACAGGAGAAAGAAGCTACGCAAGGGCTCGGTTG CCTCTGCTTTTAATCTAGGATCAACTGATATGCGGACAAGTGCCAATTGCCCTTCAGTCATAAGTTCCTCTGGGCATTTA TCATCAGCTGAGGATCAGTCATCTGGCTTTCAAATCAAGCACAAATTTGAAAAGGTTAAAAATCCTACTGTCCCTTCTGT CTTATTTGATGGAGTAGCCAAGGATACCACACAGAAAAACTTAGGTTTTGACAGTGTAAATGACAGTTGCTCATCTTCTA AGTCAAATATGGAACTTGTTTCAGATTCCTTAGAGATTGAAATGGATGAAACTGGTGAATGCTCCTCCTCTGATGTAATA GTTATGGATGCTACAAGGGAGGAATTGACAGAAATGGATTTCTGCATTAACATTTTAAAAAGCCATGGACTTCTTAAAGG AGATTCTGTTGCAAATAATGTGGCTTCCAGGGAAGGTGCTATTACCCATGGTAATAGTTACTGTTCCAGGTCATGCAAAA TATGCGGTCATTTGGACAGTTCATTGAACATGCTTTTATGTGATCATTGTGAAGATTCATATCATCCATCTTGCTACAAT CCTCGTTTGAAAAAATTGCCAATTGACGAGTGGTTTTGTCATTCATGTCTCAAAAAAAGGCAGAAAGTTCTAAAGGAGAC AATGATCAGATCACCAGGTATCGCAAGTAAAATGGCCAAATGTAGAACTGCCTCAGTTAAGGATGGATTGAATCCCATTC TATTGATGTTGAGAGACAATGAGCCATATAAGTCTGACGTGCGGGTTGGTAAGGGTTTTCAAGCAGAAGTATTTGACTGG TCAGGCCCAATAAGAAGGTATGTTTCGTTTTAATCACAGATGTTTGGAACTACACATTTGTATGATATCGTACTAGGTTT TTCTTAAATTTCTTTCAATATAAGATTTTATTAATTTTAGTTTTTGTGAATTGCTTGGTGTATAATTATGTTCATATTCT ACAGGGAGCTGCATTCTGCATTTCCATTATGTTAAGGTCCTATATTGACTAAAGATATGACTGAATAAATCCTTGGCACT CCTCACTGTTGAACCACTTTTGGGGTCGAGTTAGGCCTAGCTCGAATTTAAGATGATATATGAGCCTATACTATTTATAT TTTTTGGGCCCACTTGTAGATCAGTAGATGTCTAATCCTGCAACCTTCACGCTCCAGGTGTCTAGTTCTGAGTGTGAGGG GTGTGTGTGTTAAAGTCACACATTGACTAGAGGTATAACTAAATAAATCTTTATAAATGGTAAGACAATCCTCACCCTTG AGCTAGCTTTTGGGGTTTAAGTTAGCCCAAATTTTACGTCTAGTCTTGGGCGTGAGTGAGTGTCTTAAGGTCCCACACTG ACTAGAGATATAGCTATTTAAATCCTTATGAATGGTAAGGCAATCCTCACATGTGAACTAGCTTTTGGGTTGAGCTTGGC CTAGCTCAAATTCGTGATGGTATAAAAGTGAATTCTAGATCCGCAATTAGGCCACTCACTGGTGTCCAAAAATATACCAG ACCCCGTGGATTTCCGGGACAATGAAAAAAAAATAATCCTATAATCTCCATGCTCCAAATGTCCTGTCCAGGGCATGAGA GATGTGTGTTAGATCCCACATAGACTACAGATAAGGCCCAAAAAATCTTAAAAAAAGGCTTGGCTAATCCTCACAATGTG AGCTAGCTTGGAGTAGAGTTATAAGACATTGCTATTCTTCATTTATTTTTGAAACGTAGACATTGCTATTCATATATACA CTAAAATTTGCTTTTAGTCCATGTAAAATGTTCAATGTTGGTTTTAGTCATTTTAGTCCCTGAACTTTTGAAAGTCTCGC TTTTATTTAGCCTTTGACATGTGGTGTTAGAAGTCCCACATTGGCTAGAGATATGCCATAGATAGCCTTTATAATGGGTA GAGTAACCGTCAACTCTAGAGCTAGCTTTTGGGTTGAGTTAGTCCTCCCAAATTCTAATATTTGTTTTTTTTTTGTATCT TGTTTTGGTTTTATGCAAACTGATGAATGTTATCCATCTATAATAGACAAGTGCTGCAGTGGCACGGTAATTGTTGTTTT GTATTGGTACAACCTTTTTTATGCATGGTATGGTCCACATTTTGTTAATGACAAGGGCTAAAGTGATGCTATTTCAAAAA ATGAGGGACACAAATGGGTTGTTTTAAAAATCAGGGACAAAAACCATATGTTGATCATTTTATAGGGACTCAAAACCAAT AAGTTTGGCTAGAGACATTTTATTTCCACATATCTTTGTTTTTACTGCACTCCACGAACCTTACTGATTACCTCTATCTT TGTAAATGTCTGGAAATGGATTGGAATAGAGCGGAGGCACTTAAGCTTATACTTCGCCTATAACTTTTAAGCAAATCTTC TGATACAGACTGAGTGAGACAAAATTAGCACATGGACAGCTCATAAGATTTCTGTCCCCTTTAGTTGATGGGAGCATTCC TGTATATTTAGTAACCTATGTTTTCTTTGCTTGGGTGAAGTAAGATTTTCTTATTGTGCATATTTAGTATGTCTCTATCT TTATGCATTGTCATTAGGAATCTATATTAGCCCTTTTTGGGTATTATTACTTTGTTACCAACATTATTTTGTTGTTTCTG GCAGTGATGAAGATGACCTTCCTGAACCTTTAGAAATTAAACCTTCAGAATTTTCTAGACTACAGGTAAAAGTTTTGGTT ATTTGCTTTTCTGATCTGCATTTTATTTGAGTCTCAAAGTGGTGGACAATGCTTTTCTGTTCTGCAGGAAGAGGATATGA GAAATCCAACTAAACTCAGTTCCATTGGTAATTGGCTTCAATGTCAGGAGGTTGTAGATAGAGCCAATGGAACTATATGT GGAAAGTGGCGCAGGCAAGTCATCTCGGGTTGTTCTAGTCTTGAATGATTTTATAACTCATTATTTGTAGGATGATCTTC CTATTCAAGAATTATTTCCTTGCCAAACATGAACAAAAAATATTGTAGGATGGTGCAGTACAAACTTCACTCAAGTTTGT TTCTCATGGGTTTAGGTTTGAGTAGGCAATGAATGTAGCAGTTACATAAAGCCCAAGCAACATTCTTGGCTGATGGATAA TCTCAGCCCATTAATTTAAGGGTTGGATCCGTGCCCTTCTTTAGGTGAGGCTAATTAGCTGTTGCAGAGGAGACTAAAAG AGCCATTTAGAGTGGATTTAAAGGATAAAACGCCTAAACTAGATGGTTTTACTACTGTTGAATGCTGATTTTTAGGGATG TTAGGACTTAGGATATGTTAATAGTTGAATCAGAGAGTGTGAGAAAGAGTGAGAGAGAGAGAAAGTAACAGAATTCTTTT ACTATTCTTATTGAATGAATTGTTACTGAAGATACAATGGATGCTACATTTATAGACTAGCTAAGCAGTCTCTGTTCGAA ACTAACACTAACTAAGGTAACTAGTCTAGCTAAGTACAATAAATACATTATAGATGTTTACTCTATTAGTTAAGGATAGG ATTTGAGTTCTCTCCTGTTTTGAAGAACATAATATTTGTGTTTTGAGAGAGACAATTTTTTTCCGGTAGATCAACCCAAC ATCATAGCTCAGAATTAGTTTTATGTTTTCTCTCTTATAGCATAGTACTCACATTCTCCTAATTAGTTGTTTAAAATGTA TTCAGTTAGGAATAACTAGATGTTTAGAATTCCCAACTTAGGTTGTGCTAATTAGGAACTAGTATTAATTATTAGAGATA ATATGTACACAAATAGCTGAGTCTAGTTAAGTCTCTTTATAATAAGTTGTTGTTCAGCTTCCAGCTGTGTGGCTTATGTA ATAGTGTTAAGAAAGCTTCTTAGAGAAGCTTTCCCAGCTCGATATAAAGAGCTCACTGTACTTTCTGTTATGCAGTTTTC TAATAGCAGTACAATTTCATATCTCTCTCTCTCTCTCCTCTCTAGTTCTTCTTGTTTCCAGTAATTTGTCATTAATACAT GTAAATGTATTTGTAGTTTTGTTCTATTTATCATAAAGGAGAATACAATGAAAGAAGGCATCAAGCCAGAAATCCTTGAC AATAGATGCTATCACCAACACTAATATTGGAGAAACTGTGTATCTACTAGCATTATATTATTATGAAGTCTAAAAATGCA ACTGTTATTTGGGGCTTATGGTTGGTGAGGATGTTGAGAATAACAGAAATTAGGTAGAGAGAGAACAGAGAAACAGAAAA CCAAAATTCTGAAAATTCTGTTATTATTAGTTAACTTCAGAAAGTACATCAAGGGCTCTTATATAGAGCTCAACAGGACA AGCTTCTACACGAAGCTTAAACTAGTTGTACTACACATAATGGCTAACTCGATACACCAAAGTACAATCAGAGTACTCTA ATAGAGGATTGCATGAACTTTCAAGGGTAATTTCTTATACTACCTCTGCTATGGATAAAGGATACTTTCACTTGCCAATG GTTATTTTAGAGGGGTTTCTTTGTTCAGTTTGTTGGATATACAGTGAAATTTGCAAGCTTTGCTTAGCTAATTATCTTGT CTCGGTTGTTTCTGTTCTTACTTTTTCCAGTTCTCTTTCAGAAGGATATCTTATCCTCTTTTTCTATCTGAAATAAGAAA AGATGTGTACCCCTTAAACTGATAAAACATTCTTTGGTTTTGTATCATAGTAAAACCCAAGCTTTGTCTTGTAGAGTAGC GCTAAGGATAAGTAAACGTACTTAATCTTTTTCTTTCCATAAACTCTGAATGTTTATATTGTCTTTTCTTCATCATGACA TACTTTTTCTGCTCATTTCCTTACGATGATTTTGCTACTTTCTTTGTGAAGATGATTCATATACAAAAGGGAAAAATGGG TGTAGTGTGAGAATGAATATCTTGTTGATTGTGCTCAAAACGCCTCAATGTAGCAACTATTTTTGTTTGGCAGGGCTCCA CTTTTTGAGGTTCAAACTGATGAGTGGGAGTGCTTCTGTGCTATTCATTGGGATCCATCTCATGCTGATTGTGCTGTACC TCAGGTGAAATGAGTTTAACTCTCTAGCTTTCTTGTTTCTGTGTTGATCATCTAATCATAAGGTGTTAGTACTTTTTGAT CTTGTGGGAAGACTACTGTATTGTTCCTACCCTGCTAGGCAAGGCAAATCTTCTCTAACATAATATAATATCAGACCAAG TATTATATAATTCTGTAACCTCACTAAAGTCTGTATTATTTCCTTTGAAATTATTAATGATTCAAGTACTTTTTGACCTG AATTAAATATGGCTTAATATGTATGTCCTTGCGTATAGCAGGAGTATAACACAGAGTTATGTATTCAGGGCATTGAACAC AACATAACAGAGTGATGATGGCAACACTGGAAAGAAAAAAAAAAGGAATAGGGACTCAACACCACACAACTTATATTCTA ATGAATATTAATTTTTTTGTATGAAACATTAATATTGATATGTATGAAACGTCTAGGATTTATTGGGATGTTCAAATACA TGGAAATATATTTAAAATGTTTTGTACCGAAATTTAATATATATTAGTTGTCACTGTTGTGTCTTGCATGTACTAGATGT GGACCAATTGTCAGTATCATAAAGTAGAGCGATCTTGAGTTTACTAATACTACTATATAGAGGGGGTAGGTTGATGTGTT GTAAAAGTTATTCGAAGTCTCATTGGTGAATATATCTTTTAATGTCTCCTTTGCATGCCATTTTCCTTTGTTCTTGTTAC TTATTTCTAACGTTTTTCATATGTAAATTCGAACTTGTGTTTCTGAGAAATATTGGTTGTTATAAAATATAAATTCTGCA AACTAGACATTATGAAACTGCATTGAACTTAGTCAGCCCAACCAAATCAGTCTCATTTGAAGGTATAATTTGGTGAATCT TTATTTTTTTTGGAGCTTGCATATTTTTTAGTTTCTGTTTTCTAGTTTAATGTTGCTTTCAACTATATCTTGCTAACCTG CATTGTGGTTGTCATTCTAAATTCCCATCTCATATTGAACACTAGCCGTGTCCCTTTTTATGTGCTGCAGGAGGTGGAAA CAGATCAAGTTTTGAAGCAACTTAAGTACATAGAAATGGTATGCGTAAACTGCATAATTTTGATTGTTGCATTTCTGTCA ACGGAATCTGTACTATAAATTAGTAGTTTGTGTTTCTTGGTTTATACTTCTATTTGTGTGCTATGTGTAAATGATGATTT TTCATGACACTAGTTAACCTTTCTTGATGATTTAAAGGGTATGAGAGCAATTAAATGACATGGTTCATCGATGGGATTTT CTTATTGGGTCCACTTTGAATGACAAGTTAAATATTTTCTAGGAATATTGGAATGTGGGGCTTTGTGTCCACCTTCAAAG ACACCGAGTCTTGTCTTATCTTTTTCTATTTTTCATCATTATTGCATAGCTTATGTGTTTAACAACATGTATGATATGTT TACATTCTTGCTTTACAGCTGAGGCCACGACTTGCTTCTAAACAGAGAAAATCAGATAGCACAGCATAAAGGTGATTGAA GAATCTATAGTGGTGATAAAGCATGATGTTTTGTTCTTGCATATTGTAATTGTACAATATGTTCATACATACCAGATTTA GGATGTGTTCCTAGTCATTTGGTGCCAATGGATTCACAACAATTTTTCATGATCCGAAGTTCTATATTTTTCTGCTTTAA TTCCTTCATTCTTTTTTTGTCATTACTAGTTCCCTCATTATATGTGGTTATAGTACGACTTCTATTTGCTAACGGGTTAA AATGAAACAGAACATTCATTAACTTAGGTGTTTGTTTCAACTTTCAAGTAATGAAAATGCATTCTCAAGAATATGGAGGT TGGGAATGAATGTTCTCAAGTTAATTACAACTCTGAAACACATTCATTAACTTAGGGGTATTTGAAGCTCGATCATCAGA GCTTAAATTATTGTGGTTGTTCTATAGCTTCTATTTACGTGGTTTACTCGTTATGAATTATTGTATTTAAG
CDS sequence (LotjaGi1g1v0556600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAATACAACGTTCTGGTTTATGTTATGTATCTGATGATGGGGAAGATGTTCTTTGTGACCGGATGCCTAGTGGTAA AACTTGGCAGGTGTATTCGAAAGGAAATAAGCACCCTTTTGACTGGTGTAGAAAAGCTGAACCAACGGAAGAGGATAGAA GGAAAACTGGTGATTCTTACAACTCAAACTGTTTAAGTAGCTTTGGCCGGCCATCAACTGCTGGTATAATGACTGAAAAT AGTGCACCTAATATGGTATACAGGAGAAAGAAGCTACGCAAGGGCTCGGTTGCCTCTGCTTTTAATCTAGGATCAACTGA TATGCGGACAAGTGCCAATTGCCCTTCAGTCATAAGTTCCTCTGGGCATTTATCATCAGCTGAGGATCAGTCATCTGGCT TTCAAATCAAGCACAAATTTGAAAAGGTTAAAAATCCTACTGTCCCTTCTGTCTTATTTGATGGAGTAGCCAAGGATACC ACACAGAAAAACTTAGGTTTTGACAGTGTAAATGACAGTTGCTCATCTTCTAAGTCAAATATGGAACTTGTTTCAGATTC CTTAGAGATTGAAATGGATGAAACTGGTGAATGCTCCTCCTCTGATGTAATAGTTATGGATGCTACAAGGGAGGAATTGA CAGAAATGGATTTCTGCATTAACATTTTAAAAAGCCATGGACTTCTTAAAGGAGATTCTGTTGCAAATAATGTGGCTTCC AGGGAAGGTGCTATTACCCATGGTAATAGTTACTGTTCCAGGTCATGCAAAATATGCGGTCATTTGGACAGTTCATTGAA CATGCTTTTATGTGATCATTGTGAAGATTCATATCATCCATCTTGCTACAATCCTCGTTTGAAAAAATTGCCAATTGACG AGTGGTTTTGTCATTCATGTCTCAAAAAAAGGCAGAAAGTTCTAAAGGAGACAATGATCAGATCACCAGGTATCGCAAGT AAAATGGCCAAATGTAGAACTGCCTCAGTTAAGGATGGATTGAATCCCATTCTATTGATGTTGAGAGACAATGAGCCATA TAAGTCTGACGTGCGGGTTGGTAAGGGTTTTCAAGCAGAAGTATTTGACTGGTCAGGCCCAATAAGAAGTGATGAAGATG ACCTTCCTGAACCTTTAGAAATTAAACCTTCAGAATTTTCTAGACTACAGGAAGAGGATATGAGAAATCCAACTAAACTC AGTTCCATTGGTAATTGGCTTCAATGTCAGGAGGTTGTAGATAGAGCCAATGGAACTATATGTGGAAAGTGGCGCAGGGC TCCACTTTTTGAGGTTCAAACTGATGAGTGGGAGTGCTTCTGTGCTATTCATTGGGATCCATCTCATGCTGATTGTGCTG TACCTCAGGAGGTGGAAACAGATCAAGTTTTGAAGCAACTTAAGTACATAGAAATGCTGAGGCCACGACTTGCTTCTAAA CAGAGAAAATCAGATAGCACAGCATAA
Protein sequence (LotjaGi1g1v0556600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIQRSGLCYVSDDGEDVLCDRMPSGKTWQVYSKGNKHPFDWCRKAEPTEEDRRKTGDSYNSNCLSSFGRPSTAGIMTEN SAPNMVYRRKKLRKGSVASAFNLGSTDMRTSANCPSVISSSGHLSSAEDQSSGFQIKHKFEKVKNPTVPSVLFDGVAKDT TQKNLGFDSVNDSCSSSKSNMELVSDSLEIEMDETGECSSSDVIVMDATREELTEMDFCINILKSHGLLKGDSVANNVAS REGAITHGNSYCSRSCKICGHLDSSLNMLLCDHCEDSYHPSCYNPRLKKLPIDEWFCHSCLKKRQKVLKETMIRSPGIAS KMAKCRTASVKDGLNPILLMLRDNEPYKSDVRVGKGFQAEVFDWSGPIRSDEDDLPEPLEIKPSEFSRLQEEDMRNPTKL SSIGNWLQCQEVVDRANGTICGKWRRAPLFEVQTDEWECFCAIHWDPSHADCAVPQEVETDQVLKQLKYIEMLRPRLASK QRKSDSTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 487 | 469 | 5.5E-170 | – | |
| PANTHER | 19 | 487 | 469 | 5.5E-170 | – | |
| Gene3D | 196 | 312 | 117 | 8.6E-15 | ||
| SUPERFAMILY | 239 | 306 | 68 | 1.17E-14 | ||
| ProSiteProfiles | 253 | 303 | 51 | 9.499 | ||
| SMART | 255 | 301 | 47 | 3.4E-10 | ||
| ProSitePatterns | 256 | 300 | 45 | - | ||
| Pfam | 256 | 302 | 47 | 7.7E-11 | ||
| Gene3D | 381 | 481 | 101 | 7.0E-8 | – | |
| ProSiteProfiles | 400 | 460 | 61 | 11.669 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0556600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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