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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0689100 |
| Transcript ID | LotjaGi1g1v0689100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1NAA5|I1NAA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0689100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125667871..125671598) extracted from Lotus japonicus Gifu genome v1.2.
GAGAGAGAACAGTGCTGGTTCTTTGTTTGAAAGTTGGTTAGAGATAACATTATAGGCTAAGTTTCTTCTGATAATTTCTC TTTGTGAAAATGGGACCATTCTGCTTTATGCACTGGGAGTTTTGTGCTATTATGTTGTGTGTTATATTACTTCTTCTTCA GTGGAAGTTCAAGTTGTTTCATTTCTTCCTTTTGGATAACTTGTGTCCTATATAATCATTGTGTTTCCTTTGCTTCTTTT GGTCTTTTAGGGAAAGAAAAGGAAAGATACAATCTGTATTGCACTTGCTGATGAAACATGTGAAGAACCAAAAATAAGAA TGAACAAGGTTGTGAGAAGCAACCTTAGGGTTAGGCTTGGAGATGTTGTTTCGGTGCACCAATGTGCTGATGTCAAGTAT GGAAAGCGCGTCCACATTCTTCCTGTGGATGACACTATTGAAGGAGTGACGGGAAATCTCTTTGATGCGTACTTAAAACG TGAGTTACTGCTTCATATCTTATGATATCTAGTGACACTGTTTTTTATCTTCTGGTGTCAATATCCTTTTTATGCAATTG TGTCTTCGACTGTAATGGATAAATTGTATTTCAGGAGAATACATTTTAGTTAATTATAAATTCTGAGCTGCTTCACCCTG TCTGTGCTTACTACATGGTTGACGAAAGTTTTCTCTTATTCTCTATGGGTTAATATCAATCACGAAATCATTGATTTATA CATTTTAGTTAATTATAAATTCTGAGCTGCTTCACCCTGTCTGTGCCTACTACATGGTTGAAGAAAGTTTTCTCTTATTC TTTATATGAAAATACCTTGGGTGAGTTTATATTGTCTCGCTAATTGTTTCTCTTAGAATTCTCTTCTTGCCAGACTCTTC GAACTTACTTCGTTTGTCTTGGGTGAATTTATATTGTAATGCTCAGCATTGGTTTCTCTAAGAATTATTACTAGAAAGTT AATAGAGTTGAATGGCTATGGGACATAGTTGAATTTCTGTTGTTATTTTCCCTGGCGGTGACCCTCGGTTGACATTTGAG TTTGATGGTTGTTGCATTCTAATATATTTTGAATACTAAGCCTAGTTTTACTTTTGCAGCTTATTTCTTGGAGGCTTATC GACCAGTGAGGAAGGGAGACCTCTTCCTTGTAAGAGGGGGTATGAGAAGTGTAGAATTCAAGGTTATTGAAACTGAGCCT TCTGAGTACTGTGTTGTCGCCCCAGACACAGAGATCTTCTGTGAAGGAGAGCCTGTTAAAAGGGAGGATGAGAATCGATT AGATGAGGTTGGTTATGATGATGTTGGTGGCGTGAGAAAGCAGATGGCACAGATCAGGGAACTGGTGGAACTGCCACTGA GGCACCCACAGTTATTCAAGTCTATTGGTGTTAAGCCACCAAAAGGAATCCTTCTGTATGGACCCCCTGGATCTGGCAAG ACTTTGATTGCTAGAGCTGTTGCAAATGAAACTGGTGCTTTCTTTTTCTGCATCAATGGCCCTGAGATCATGTCAAAACT GGCTGGTGAGAGCGAGAGCAACCTCAGGAAGGCTTTCGAGGAAGCGGAGAAGAATGCACCCTCAATCATCTTCATTGATG AGATAGATTCAATAGCTCCAAAGAGGGAGAAGACTCATGGAGAAGTTGAGAGACGCATTGTTTCTCAGCTCTTGACACTC ATGGATGGGCTTAAATCTCGGGCCCATGTAATTGTCATTGGAGCCACAAATCGCCCCAACAGCATTGACCCTGCCCTTAG GAGATTTGGAAGGTTTGATCGGGAGATAGATATTGGCGTACCCGATGAAGTCGGGCGCCTTGAGGTTCTTCGAATTCATA CAAAGAACATGAAGCTTGCTGAAGATGTAATGTTCAAATTCATTTCCCCTAAGTTATAGTTTGATTTGAATGCTCTCATT TTGAATGGCATTTGTCTGTTGTGTCACTTGCAGGTTGATTTGGAAAAGATTTCTAAGAACACACATGGCTATGTTGGTGC TGATCTAGCTGCGTTGTGTACTGAAGCTGCACTTCAGTGCATCAGGGAAAAAATGGATGTGATTGACTTGGAAGATGAGG AAATTGATGCTGAAATATTGAACTCTATGGCTGTAACAAATGAACATTTCCAGACTGCTCTTGGATCAAGCAATCCTTCT GCTCTCCGTGAAACAGTAAGTATTTTATCCTGAAGTTTCTTTTATCAATGTTAAGCTTCCTATTCTCTTGTTTTCTCTTT CTTTTTGGTATCCTGTTGTACCTGAACTTTTCTAAGTTTCACGCACCTCTTTAATTTCAACTTTGTTACTGAACCAGGTT GTTGAAGTGCCCAATGTCAGCTGGGAGGATATTGGTGGTCTTGAAAATGTTAAGAGGGAACTCCAAGAGGTTCGCTGAAG CTCTCGCATAATTCACATTATAGTTTCTAAGCTTTCTTTCATCTGTCTCTGATTTTTTCTACTGTTCTCTTTTGCAGACT GTTCAATATCCAGTGGAACACCCTGAGAAGTTTGAGAAATTTGGAATGTCACCTTCGAAGGGAGTTCTTTTCTATGGTCC CCCTGGGTGTGGTAAAACACTATTGGCTAAAGCTATTGCCAATGAATGCCAGGCAAACTTCATCAGTGTCAAAGGTCCTG AGCTACTCACTATGTGGTTTGGAGAAAGTGAGGCTAATGTGAGGGAAATTTTTGACAAGGCTCGTGGTTCTGCTCCATGT GTCCTATTCTTCGATGAGCTTGACTCTATTGCAACTCAGGTTTGTACAATCCTGGTTTATAAGCTATAATTTGCACTTCA GGCAAAACTCTATCTGGAATGTTTGACACTATTTTCTTTCTAAGTATTTTGAATAGAGAAGATTAGTGTTATCTAGACAA TCATAGTTATCTTATATGATTACCTGTCCTTAAATTTTTGCTTCATTATATACTGCAGAGAGGTAGTAGTGTTGGAGATG CTGGTGGTGCTGCTGACAGGGTGTTGAACCAACTGCTTACTGAAATGGATGGGATGTCAGCAAAGAAAACTGTGTTCATC ATTGGGGCCACTAATCGACCAGACATTATAGACCCAGCTCTTTTGCGTCCAGGTCGTCTAGACCAGTTGATATATATCCC CCTCCCAGACGAGGATTCGCGCCATCAGATATTTAAAGCTTGCTTGAGAAAATCCCCAGTCTCAAAAGATGTTGATATTA GAGCTCTTGCAAAGTACACTCAAGGCTTCAGTGGTGCTGATATTACTGAGATTTGCCAGCGTGCTTGCAAATATGCCATT AGAGAGAACATTGAGAAGGTACTGTTTTACTGAGCTGTTTTTTTCTCTGTATTCCATTTACTTGCTGAGCCCCTTGAGAA CAATTGAAATCATTGTGAAAACTGGATCATCTTATAAAAAATTCTGTTCCAATTTCCCTTGACAGGACATTGAGAGAGAG AGGAGGAGAAGCGAGAACCCCGAGGCCATGGAAGAGGATGTTGATGATGAGGTGGCTGAAATCAAGGCAGCTCATTTTGA AGAATCAATGAAGTATGCACGAAGGAGTGTAAGCGATGCTGACATTCGGAAGTACCAGTCATTTGCCCAAACATTGCAGC AGTCTAGAGGGTTTGGATCTGAGTTTAGGTTTGCAGATTCCACCTCTGGTGGCGGTGCTGGTGCTGGTGCTGCATCTGAT CCATTTGCAGCTGCTGGTGGGGCTGATGAAGATGATCTTTACAGTTAG
CDS sequence (LotjaGi1g1v0689100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAAGGTTGTGAGAAGCAACCTTAGGGTTAGGCTTGGAGATGTTGTTTCGGTGCACCAATGTGCTGATGTCAAGTA TGGAAAGCGCGTCCACATTCTTCCTGTGGATGACACTATTGAAGGAGTGACGGGAAATCTCTTTGATGCGTACTTAAAAC CTTATTTCTTGGAGGCTTATCGACCAGTGAGGAAGGGAGACCTCTTCCTTGTAAGAGGGGGTATGAGAAGTGTAGAATTC AAGGTTATTGAAACTGAGCCTTCTGAGTACTGTGTTGTCGCCCCAGACACAGAGATCTTCTGTGAAGGAGAGCCTGTTAA AAGGGAGGATGAGAATCGATTAGATGAGGTTGGTTATGATGATGTTGGTGGCGTGAGAAAGCAGATGGCACAGATCAGGG AACTGGTGGAACTGCCACTGAGGCACCCACAGTTATTCAAGTCTATTGGTGTTAAGCCACCAAAAGGAATCCTTCTGTAT GGACCCCCTGGATCTGGCAAGACTTTGATTGCTAGAGCTGTTGCAAATGAAACTGGTGCTTTCTTTTTCTGCATCAATGG CCCTGAGATCATGTCAAAACTGGCTGGTGAGAGCGAGAGCAACCTCAGGAAGGCTTTCGAGGAAGCGGAGAAGAATGCAC CCTCAATCATCTTCATTGATGAGATAGATTCAATAGCTCCAAAGAGGGAGAAGACTCATGGAGAAGTTGAGAGACGCATT GTTTCTCAGCTCTTGACACTCATGGATGGGCTTAAATCTCGGGCCCATGTAATTGTCATTGGAGCCACAAATCGCCCCAA CAGCATTGACCCTGCCCTTAGGAGATTTGGAAGGTTTGATCGGGAGATAGATATTGGCGTACCCGATGAAGTCGGGCGCC TTGAGGTTCTTCGAATTCATACAAAGAACATGAAGCTTGCTGAAGATGTTGATTTGGAAAAGATTTCTAAGAACACACAT GGCTATGTTGGTGCTGATCTAGCTGCGTTGTGTACTGAAGCTGCACTTCAGTGCATCAGGGAAAAAATGGATGTGATTGA CTTGGAAGATGAGGAAATTGATGCTGAAATATTGAACTCTATGGCTGTAACAAATGAACATTTCCAGACTGCTCTTGGAT CAAGCAATCCTTCTGCTCTCCGTGAAACAGTTGTTGAAGTGCCCAATGTCAGCTGGGAGGATATTGGTGGTCTTGAAAAT GTTAAGAGGGAACTCCAAGAGACTGTTCAATATCCAGTGGAACACCCTGAGAAGTTTGAGAAATTTGGAATGTCACCTTC GAAGGGAGTTCTTTTCTATGGTCCCCCTGGGTGTGGTAAAACACTATTGGCTAAAGCTATTGCCAATGAATGCCAGGCAA ACTTCATCAGTGTCAAAGGTCCTGAGCTACTCACTATGTGGTTTGGAGAAAGTGAGGCTAATGTGAGGGAAATTTTTGAC AAGGCTCGTGGTTCTGCTCCATGTGTCCTATTCTTCGATGAGCTTGACTCTATTGCAACTCAGAGAGGTAGTAGTGTTGG AGATGCTGGTGGTGCTGCTGACAGGGTGTTGAACCAACTGCTTACTGAAATGGATGGGATGTCAGCAAAGAAAACTGTGT TCATCATTGGGGCCACTAATCGACCAGACATTATAGACCCAGCTCTTTTGCGTCCAGGTCGTCTAGACCAGTTGATATAT ATCCCCCTCCCAGACGAGGATTCGCGCCATCAGATATTTAAAGCTTGCTTGAGAAAATCCCCAGTCTCAAAAGATGTTGA TATTAGAGCTCTTGCAAAGTACACTCAAGGCTTCAGTGGTGCTGATATTACTGAGATTTGCCAGCGTGCTTGCAAATATG CCATTAGAGAGAACATTGAGAAGGACATTGAGAGAGAGAGGAGGAGAAGCGAGAACCCCGAGGCCATGGAAGAGGATGTT GATGATGAGGTGGCTGAAATCAAGGCAGCTCATTTTGAAGAATCAATGAAGTATGCACGAAGGAGTGTAAGCGATGCTGA CATTCGGAAGTACCAGTCATTTGCCCAAACATTGCAGCAGTCTAGAGGGTTTGGATCTGAGTTTAGGTTTGCAGATTCCA CCTCTGGTGGCGGTGCTGGTGCTGGTGCTGCATCTGATCCATTTGCAGCTGCTGGTGGGGCTGATGAAGATGATCTTTAC AGTTAG
Protein sequence (LotjaGi1g1v0689100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEF KVIETEPSEYCVVAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY GPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI VSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKNTH GYVGADLAALCTEAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFQTALGSSNPSALRETVVEVPNVSWEDIGGLEN VKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD KARGSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY IPLPDEDSRHQIFKACLRKSPVSKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPEAMEEDV DDEVAEIKAAHFEESMKYARRSVSDADIRKYQSFAQTLQQSRGFGSEFRFADSTSGGGAGAGAASDPFAAAGGADEDDLY S
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 713 | 713 | 0.0 | – | |
| Gene3D | 1 | 24 | 24 | 5.5E-6 | – | |
| PANTHER | 1 | 713 | 713 | 0.0 | – | |
| TIGRFAM | 2 | 679 | 678 | 7.5E-262 | ||
| SUPERFAMILY | 24 | 116 | 93 | 6.87E-34 | ||
| Gene3D | 25 | 120 | 96 | 5.5E-48 | – | |
| SMART | 42 | 108 | 67 | 6.3E-16 | ||
| Pfam | 44 | 107 | 64 | 5.9E-13 | ||
| SUPERFAMILY | 116 | 378 | 263 | 2.97E-69 | ||
| Gene3D | 121 | 286 | 166 | 2.0E-66 | – | |
| CDD | 123 | 286 | 164 | 4.24984E-33 | – | |
| SMART | 153 | 289 | 137 | 5.7E-24 | ||
| Pfam | 157 | 286 | 130 | 3.1E-48 | ||
| ProSitePatterns | 257 | 275 | 19 | - | ||
| Gene3D | 288 | 383 | 96 | 4.4E-34 | – | |
| Pfam | 309 | 352 | 44 | 1.1E-14 | ||
| Gene3D | 384 | 564 | 181 | 2.3E-74 | – | |
| SUPERFAMILY | 388 | 676 | 289 | 2.17E-76 | ||
| CDD | 396 | 563 | 168 | 4.0412E-31 | – | |
| SMART | 426 | 565 | 140 | 2.4E-24 | ||
| Pfam | 430 | 563 | 134 | 2.6E-46 | ||
| ProSitePatterns | 533 | 551 | 19 | - | ||
| Gene3D | 565 | 679 | 115 | 4.0E-43 | – | |
| Pfam | 585 | 625 | 41 | 3.4E-13 | ||
| MobiDBLite | 693 | 721 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0689100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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