Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0060100 |
Transcript ID | LotjaGi2g1v0060100.4 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT5G16000.1 NSP-interacting kinase 1; Swiss-Prot: sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1; TrEMBL-Plants: tr|I1N6J0|I1N6J0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0060100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:12720204..12724484) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGATGCCAAGAGGAGAAGTTGCTCTATGTTTTGTGACATTGTTCTTCTTGTTTTGGAGCTCTGCAATTGCTGTGCT CTCTCCTAAGGGTATAAACTTTGAAGGTAAAACTTGAAAATTCTGTTTCTTTCCACAAATATTTGGCCAAAAGTGTGAAA AATATATTTCAAAATCAGTTCAATAAGGAGAATTATGAACTGGGTCTCAATTCAATATCTTTCTTAATACAGTGCAAGCT TTAATTGGCATAAAAGCTTCTCTTGTGGATCCTCATGGTGTTCTAGAGAACTGGGATAGGGATGCAGTTGATCCTTGTAG CTGGAATATGGTCATGTGCTCCCCAGAAAACCTTGTCATTAGTCTGTGAGTCTTCCTTCCATCTTCTACATTTGAAGTTG AAATTCAATGCGGACCAAAGAGCGCTTATTGATCTTATTCAGTGTTTTTTCTAGTAGATAAGTTTCAACAAATGTTCTTT CGTTCGAGTCCAAGCGGAATCTTAGTAGCAAAACAAAGCTTGAAATTACTGTTGAACACTCCACAGCAGTACCAAGCTTG TACTGCAAAATGCTTTAATTTAACACTTTGATGAATCTGGTCCTGATGGGTGCAGGGGCATTCCCAGTCAAGGTTTATCT GGTATTCTATCTCCAAGCATAGGAAACCTCACAAATCTTCAGACTGTGTAAGTAAGCACAGTATAATTTAGAACTCTCAA GTCTCAAGTACATGTTTCTTATATCTGTTGCTTCCATTGTTACTAAGTTGGGTATTCTGTTGCGGACTACTTTTCAGAGG GCTACAGAATAACAACATAAATGGCCCAATCCCTTCAAAGTTGGGAAAACTTTCCAAGCTTCAAACTCTTGATCTCTCTG ATAATTTCTTCAGTGGGGAAATTCCTCCATCTCTGGGTCATCTGAGAAGCCTCCAGTACTTGTAAGCATCTATGATGGAA GTTCAGAAGATGTCATACTATCAGTAACTTGATTTCTAGAGCTAATGTAAAATGATTTCAGGCGGCTCAACAATAACAGT TTTACTGGGGAATGCCCAGAGTCACTGGCTAACATGACAGAGCTAGCTTTTCTGTGATCTCCATGACCTTTATTCCTCTT CTATTTGGTATATTCATTTTATTATTATCTGTATTTCTGAGGACGACTTGTTAATGATAATCAATTCAGGGACCTGTCCT TCAACAATCTGAGTGGCCCTGTTCCTAGAATTTTGGCCAAATCATTCAGGTTAGTCCACCCCCACCACACACACACAATC TAAGTAAAAGGAACACATGTTCAATGGGAGTGAACAATGAATTGTTATTCAACAGAACTGAAATTGTTACACTGGTTCTC CTTATACATAATGTGTAGTCTATGTTAAGTAAACTGATCTATCATATACAATATAACTATCACGAATTGGTTATAACAGA AAATAACTAATTGTGAAACAGAAATGAAAAACTATAACTAACAGAACTAACAGTGTAACTGAGCTAAAGTAGATATAAAT GTTTCATTATCTAATACACACAAGTATGTAAGTCTCACTATCTGAAAAATTCAGAAAAGTCAGTACTAACCTCAAAATTC TTCATTCCCTTGTGTTGTTTTAGTATTGTTGGAAATCCCCTTGTCTGTGCTACAGGAAAAGAAGCACACTGCCCTGGGAT GACACCCATGCCTATGTCCATGAATTTAAACAGCACTGAGGGTAAGATCCTTTAATTTCTGAATTTGAAGGGGTTTGCCT GAAAATCTTTTCATTACATCACATTCCCACATGTTTTAAAAAAATAGCAACCTGGAAGATAGCTCCCGCTATGCCCAGAG TGCAGCGAAGAGTCCGACCACTTAGTCTATTGTACTCACTCTTACCCTAATTTTACACAAGAGTCTGTTTCCAGGACTTA AACCGTGACCTTAGTCACATGACAACAACTTTTTACTGTTGCGCCAGGGCCCCCCTTCACATTCGCACTTGTTTTACCTT CTTATATTCTGCACAGTTATTATATAGATGTTCACAGAAATCTCTTTGCTTCTCTAGATGCTGCTATACAATCTGGCAGA CCAAAAACTCACAAAATGGCCATCGCCTTTGGTTCGAGTCTGGGGTTCCTCTGCTTGATAGTTCTTGGTTTTGTACTTGT TCTGTGGAGGAGGCACAAGAATAATCAACAAGCATTCTTTGATGTTAAAGGTTCAATTCCAACTTAAAATCATTATATAA GAATCTAATTGTACAGCATAGATTAACATATTTGATCCAATATTAATAGTTTCTTCTTTTTCTGTCCTAAATTCTTTGTA CAGACCGGCATCATGAAGAAGTCTACCTAGGAAACTTGAAGAGGTTCATATTAAGAGAACTCCAGATTGCCACTAACAAC TTCAGCAACAAACAAATCCTGGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTCAGATGGAACTTTTGTAGC TGTCAAGAGGCTTAAAGATGGCAGTGCCATTGGGGGAGAGATACAATTTCAGACCGAAGTCGAAATGATCAGCTTGGCAG TGCACCGGAATCTCCTGAAACTGTATGGGTTTTGTGTGACACCAACAGAAAGGCTTCTGGTTTACCCTTACATGTCCAAT GGCAGTGTTGATTCTCGTCTCAAGGGTGAGCTAAATTGTAAGAATTTCATAGGGCATGCTTGAAAATCTTTCTCAATTAC CGCACCAGTTGAGGATTGCGTATGATATGAAGCTACTGTGAGTAGTTTCTGTGTAAATTACGCAATTCTGAGCCGGTAGA ATCGAAATCAAACATGTTGATAGTAATACATTTAGCCATGATTCATTATACAGCATTATAGCATTGTTTGATTCTTGTAG TTGAATCCAATTATGGGAAATGCTTTGTTTTTTGCTGTAAATTTAGACTATAAGGCTGTTTGAACACGGACCAAAGAACA CTTTTTGAAACTTATCCAGTGCTTTAACAGATAGATAAACTTCGATTAAGGCTTTTCAGTCCGTATCGGAACGAGCTCTA GGTAAATTGAGTGGCTGATTCATATAGCTATTTTGGATATCTCCAGGTAAACCTGTCTTGGACTGGAGGACTAGGAAGCA AATTGCCTTAGGAGCAGCAAGGGGATTGTTATACCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGAGATGTGAAAG CTGCAAATATATTGCTTGATGATTATTGTGAGGCAGTTGTTGGAGATTTTGGGTTGGCAAAGCTTTTAGATCACAAAGAT TCACATGTCACAACTGCTGTAAGGGGCACTGTGGGGCACATTGCACCAGAATATCTCTCCACAGGACAGTCTTCTGAAAA GACTGATGTCTTCGGATTTGGCATTTTGCTTCTTGAATTGGTCACTGGCCACAGAGCTCTAGAATTTGGGAAGGTAGCAT ACCAAAAAGGAGCCATGCTTGATTGGGTAACCTTTCCTCCCTTTATCATTCATTTAAATCCTTCTTCTTTACCTTAAACG TATGAAGTTGAAATTATTTGAAATTGCGTCGGCCCTAACTCTACCCTAAAAGCTAGCTTATGAGTGATGTATATATCTAG TCAATGTGAGACCTTTAATACCCTTTACGCTCAGAACTAGACATGTTAAGCATGGAGATAACAAAACTTACACTCAGGCA GGTCAGGTTGATTGCCCGTATCCCCATTACAACATATATATTGGATGGGTCAGGTCAATTATTTATATTCAATTTCAGCG GGTGGCCCATCACGGGTGACCGAACAATGGATCTAGGATTAACTCTAATAGCTTATTAGAATTTGTATTAGGTCAATCAC AACTCAAAAGTTTGCTTAGGGTGAGGATTGTCCTACTCTTTATAAGTACTCCGGATGCTATATCTCTGGTCAATATATGA CATATTTTAACACTTATATTGTTGATGACTTGACATTTAGGTAAAGAAAATTCATCAGGAGAAGCAACTTGAGTTGCTTA TTGACAAGGATCTGAAGAACAACTATGACAGGATTGAGCTGGAGGAAATGGTTCAAGTGGCACTCTTGTGCACACAATAT CTTCCAGGGCACAGACCCAAAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGGCTAGTAGATAAATGGGAAGCATC ACAAAATGCTGACACAACTAAGTGCAAACCACATGAGCTCTCTGCATCAAATAGATATTCTGATCTTACTGATGACTCTT CATTTTTAGTCCAGGCCATGGAGCTCTCAGGTCCAAGGTGA
CDS sequence (LotjaGi2g1v0060100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATGCCAAGAGGAGAAGTTGCTCTATGTTTTGTGACATTGTTCTTCTTGTTTTGGAGCTCTGCAATTGCTGTGCT CTCTCCTAAGGGTATAAACTTTGAAGTGCAAGCTTTAATTGGCATAAAAGCTTCTCTTGTGGATCCTCATGGTGTTCTAG AGAACTGGGATAGGGATGCAGTTGATCCTTGTAGCTGGAATATGGTCATGTGCTCCCCAGAAAACCTTGTCATTAGTCTG GGCATTCCCAGTCAAGGTTTATCTGGTATTCTATCTCCAAGCATAGGAAACCTCACAAATCTTCAGACTGTAGGGCTACA GAATAACAACATAAATGGCCCAATCCCTTCAAAGTTGGGAAAACTTTCCAAGCTTCAAACTCTTGATCTCTCTGATAATT TCTTCAGTGGGGAAATTCCTCCATCTCTGGGTCATCTGAGAAGCCTCCAGTACTTGCGGCTCAACAATAACAGTTTTACT GGGGAATGCCCAGAGTCACTGGCTAACATGACAGAGCTAGCTTTTCTGGACCTGTCCTTCAACAATCTGAGTGGCCCTGT TCCTAGAATTTTGGCCAAATCATTCAGTATTGTTGGAAATCCCCTTGTCTGTGCTACAGGAAAAGAAGCACACTGCCCTG GGATGACACCCATGCCTATGTCCATGAATTTAAACAGCACTGAGGATGCTGCTATACAATCTGGCAGACCAAAAACTCAC AAAATGGCCATCGCCTTTGGTTCGAGTCTGGGGTTCCTCTGCTTGATAGTTCTTGGTTTTGTACTTGTTCTGTGGAGGAG GCACAAGAATAATCAACAAGCATTCTTTGATGTTAAAGACCGGCATCATGAAGAAGTCTACCTAGGAAACTTGAAGAGGT TCATATTAAGAGAACTCCAGATTGCCACTAACAACTTCAGCAACAAACAAATCCTGGGAAAGGGTGGTTTTGGAAATGTC TACAAAGGAGTTCTCTCAGATGGAACTTTTGTAGCTGTCAAGAGGCTTAAAGATGGCAGTGCCATTGGGGGAGAGATACA ATTTCAGACCGAAGTCGAAATGATCAGCTTGGCAGTGCACCGGAATCTCCTGAAACTGTATGGGTTTTGTGTGACACCAA CAGAAAGGCTTCTGGTTTACCCTTACATGTCCAATGGCAGTGTTGATTCTCGTCTCAAGGGTAAACCTGTCTTGGACTGG AGGACTAGGAAGCAAATTGCCTTAGGAGCAGCAAGGGGATTGTTATACCTTCATGAGCAGTGTGATCCAAAGATAATCCA TAGAGATGTGAAAGCTGCAAATATATTGCTTGATGATTATTGTGAGGCAGTTGTTGGAGATTTTGGGTTGGCAAAGCTTT TAGATCACAAAGATTCACATGTCACAACTGCTGTAAGGGGCACTGTGGGGCACATTGCACCAGAATATCTCTCCACAGGA CAGTCTTCTGAAAAGACTGATGTCTTCGGATTTGGCATTTTGCTTCTTGAATTGGTCACTGGCCACAGAGCTCTAGAATT TGGGAAGGTAGCATACCAAAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAGGAGAAGCAACTTGAGTTGCTTA TTGACAAGGATCTGAAGAACAACTATGACAGGATTGAGCTGGAGGAAATGGTTCAAGTGGCACTCTTGTGCACACAATAT CTTCCAGGGCACAGACCCAAAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGGCTAGTAGATAAATGGGAAGCATC ACAAAATGCTGACACAACTAAGTGCAAACCACATGAGCTCTCTGCATCAAATAGATATTCTGATCTTACTGATGACTCTT CATTTTTAGTCCAGGCCATGGAGCTCTCAGGTCCAAGGTGA
Protein sequence (LotjaGi2g1v0060100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMPRGEVALCFVTLFFLFWSSAIAVLSPKGINFEVQALIGIKASLVDPHGVLENWDRDAVDPCSWNMVMCSPENLVISL GIPSQGLSGILSPSIGNLTNLQTVGLQNNNINGPIPSKLGKLSKLQTLDLSDNFFSGEIPPSLGHLRSLQYLRLNNNSFT GECPESLANMTELAFLDLSFNNLSGPVPRILAKSFSIVGNPLVCATGKEAHCPGMTPMPMSMNLNSTEDAAIQSGRPKTH KMAIAFGSSLGFLCLIVLGFVLVLWRRHKNNQQAFFDVKDRHHEEVYLGNLKRFILRELQIATNNFSNKQILGKGGFGNV YKGVLSDGTFVAVKRLKDGSAIGGEIQFQTEVEMISLAVHRNLLKLYGFCVTPTERLLVYPYMSNGSVDSRLKGKPVLDW RTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTG QSSEKTDVFGFGILLLELVTGHRALEFGKVAYQKGAMLDWVKKIHQEKQLELLIDKDLKNNYDRIELEEMVQVALLCTQY LPGHRPKMSEVVRMLEGDGLVDKWEASQNADTTKCKPHELSASNRYSDLTDDSSFLVQAMELSGPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 7 | 7 | - | – | |
Phobius | 1 | 25 | 25 | - | – | |
SignalP_EUK | 1 | 25 | 25 | - | – | |
TMHMM | 7 | 29 | 23 | - | – | |
Phobius | 8 | 20 | 13 | - | – | |
Phobius | 21 | 25 | 5 | - | – | |
Phobius | 26 | 241 | 216 | - | – | |
Gene3D | 29 | 214 | 186 | 8.1E-58 | ||
Pfam | 35 | 72 | 38 | 1.1E-12 | ||
SUPERFAMILY | 35 | 301 | 267 | 1.31E-38 | – | |
Pfam | 99 | 158 | 60 | 4.3E-7 | ||
PANTHER | 121 | 610 | 490 | 4.0E-217 | – | |
PANTHER | 121 | 610 | 490 | 4.0E-217 | – | |
Phobius | 242 | 265 | 24 | - | – | |
TMHMM | 243 | 265 | 23 | - | – | |
Phobius | 266 | 626 | 361 | - | – | |
Gene3D | 275 | 382 | 108 | 6.2E-36 | – | |
SUPERFAMILY | 283 | 576 | 294 | 1.86E-76 | ||
ProSiteProfiles | 306 | 561 | 256 | 35.128 | ||
SMART | 306 | 561 | 256 | 2.8E-36 | ||
Pfam | 307 | 572 | 266 | 4.8E-44 | ||
ProSitePatterns | 312 | 334 | 23 | - | ||
Gene3D | 383 | 595 | 213 | 2.3E-59 | – | |
ProSitePatterns | 425 | 437 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0060100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…