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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0270600 |
| Transcript ID | LotjaGi3g1v0270600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CCR4-NOT transcription complex subunit 4; TAIR: AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4; TrEMBL-Plants: tr|K7M9K7|K7M9K7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0270600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:52220618..52228012) extracted from Lotus japonicus Gifu genome v1.2.
ACACACCTTGTGGTTTTCTCTGCCTCTTACCCTGTTGCTCGCTCTCATTCTGCGTCGTCTCCGTTATCGTGCGCTGCGCT TCTCGAACAATCTCCACCTCACAGTTCCCACTTCTTCTTCTTCCCGATCTTTCCACCACTGTAAGTCTCTCATCACTTCC AATTCCATAACCCTAATTCCTCTCTCCTCCGAATCCAATTTCAATTCTAGATCCCTAATGGATTCCGCGATTCTATTATT CTGCTATTGATTTCGCCAATCATTCTCATGCTTAACAATTTTTTCGGTTTATTGTTGTTTTGTAATTTTGAATTCTCAAT CCAGCGTCGTCGTCGTCGTCTTTCGGATTTTTGTCTGTTTCGCCTCTGTTAGTTTTCAACTATTGTGATTAGATTAGGTT TTCGATTGCCATTTGCCAATGATTCCCTTATTGTTGAATTTCCATTTCCATATCATCTAATGCATGGTCTTTTTTTTTTG CTGATTTTGTGTTACAGTATACTAAGTCACTGTGGATCAGTGTAAAGCACTTTATCAGTTTTTTGTATTAAGAGTAGATG GTAATTTGAACTGTCATCGTGATTGTTGGGTTCCTAGGGCAAAATTGCACTGTCAGTTCACTGAATATAGGGTTTTTGAA TCTTGATTTCTATCCAAAAATTTTACTTTTTTTGATTCAGGCTTAAGTTTTGTGATGACATTGATTATAATATCCCCTTG TTACAGTGTTTTCTTGACGAGGACTTATGTTTGTTGGTTTGTTGAATTTTCAGCCAGTGCAATCATGAGTGACGAAGGAG AAAGGTCATGCCCTCTCTGTGCTGAAGAGATGGATTTGACTGATCAGCAGTTGAAACCATGCAAATGTGGCTATGAGGTT TGACGCTATATCTATTTTGTTATTAGGCAATCATCTGAAGGTTTTTATATAATCTGTTGAACAAGTCTTTGTTGTGGGAT TTTTAAGGTTATTTAGTATCTTTATCAATTTGTTATATGGTTTTTTGGTCTATGTATTTTTCTCTCTGTTGATGTTTTAA CATTTGGCATTCCTCTCTCTGCCCTGCTCTATTCTTGATCCTATTAGGTGTGTCTTGTTACTCTGCAAGGTGACACTAAT TATTAAAATGAGTATACAATGTGTTATTGATGATATCTTGTTGACGGAATACTATGGTTACACTCCAAACTATATAGTAC AAGTGACTTTTTTTACTGGTTAGAATGAAGTGTTGATTCCATATTTTTTTTATACAATTCAACATGTATATAACATACTT GTTCCTTTGTTTCCTGAGGACATGGTTTTATTAATCACAAGCACTAATACTAATAAACACCAATTTCATCCCTACTTGAC TGTAGATATGTGTCTGGTGTTGGCATCACATAATGGACATGGCTGAAAAGGATGACACAGAGGGACGATGCCCTGCATGT CGTTCTCCATATGATAAGGAAAAGATTGTCGGGATGGCTTCAAACTGTGACAGGTTATTCTATTAACAGTACTTTCTTTG TAGTGTTGAAATGTTATATTGTTTTCCCAGAACCTTTCTTCTATAATTATACTAGCATGCATTTGTATAACTATATCTTA AAACAACTCGTTAAATAAGATATTATATATATATAGAACTCTTAAGTTGTATTTTATCTTAATGTTTGAGATCAGATAAA GGAAAATACCAATTATTGAACTTTTTGTTTCTTAGATCTTATTAGTTAGAAGCTTTATTATGCTTCTAAACTATGTCTTT TCTGTGTGTTCCTCTTGTTAATGATATCTTCCTTTAGATTGTTGGCTGGGGTCCATATGGAAAGAAAAACGAAGAGCCAG AAAGCAAAATCTAAATCATCTGAAGGACGGAAGCAGCTCAGTAATGTGCGAGTGATTCAGCGGAATCTTGTTTACATAAT GGGATTGCCCCTCAATCTGGCAGATGAAGATGTAATTTTTTTACCTCATCTGCTTTTGACATTCGCGTTAGCCATCTTGT GTATCTTCCTTTCTTTATCAAACAAATATTGTCATTTTTTTAATTCTTGGGCTAAATTTTCATTACAATTCATGCAGCTT CTCCAGCGGCGGGAGTATTTTGGCCAGTATGGGAAGGTCTTAAAAGTGTCAATGTCCCGGACAGCAGCTGGTGTTGTTCA GCAGTTTCCGAACAATACTTGTAGTGTGTAAGTTCATGTGCTGTTCATTTGCGGATTAGCTTCTTTTCAGTAGTGGTATT GGGCATAATTGTCCTAGTCCAACTATAGTGGCATATAGCGGCTACTCTATTGGCCACTTCTGAATGATTTAAGCGGTGCA AAAGCAATTCATCGTTGCAGCTTATAGCAGCTACTCTATTGGGAGTTGATTTTGGGTCTTGACCTCTCTAAAACCCAACA CAATCCAATTGGCTTTAAAAGTTTAGGGGCTTAGGTCCATTGACCCTATAAGTCAAAATGTTATTTAGGGATCAGAAATC ACATTACTAGGGCATCACATGCACCATCTGTTTGTATACTTGTCCTCCTTTTGTTCTCTTCAATTTATGTTCTTGTTCCT TTTTAATATTTTTATGCTAGATTATAAATTATGTGGTTTTTGCTAATATTTGAAGTATTTCATTATGATGGCTTTCCTTG TTATAGTGACCACTGGCACTATACCACCACTTTGTGCTTTTTGCCAATGAAAACATTGATATTCTGATTTTTTGGTAGTT AGCCTGTCATATTACTTTATATGATACATAGACCATTTACTGTGTCTGATTTGTTGTCATTGAAAAGAATTAGATTGTGT ACAGGTCTATGTAGTTTTTTTTTCTTTTTGAATATTTCCCTCGTTCAACATTTGGTGAAAGAAATTTAGAAAATTGGCCA GTAAAAAGACTTGAAAAACAATTCTTTCCTTGGTAAAGGAAATAGAAAAGGTTATTTATGTATTAAGCGGTAACCATGTG CTTTTATTTATAAAAATTGAAAGCAGGATTTATGCCTCCACCCTCTCCAATGGAGAGTCTCCATGATGTTCCCTGCTCTG TCAGCCTGTTTGGTCACCCTTTTTTTTTCATAATATGTTAAGTGTTGCAGCTCTTTAAGGAAGGTTTTCTGGGTTTCAGA TATATTACTTATTCAAAGGAAGAAGAAGCAATTCGATGCATTCAAAATGTACATGGATTTGTTTTGGAGGGTAGACCTTT AAGGTATCACTATTTGCACATTTTGAATCTTTTCATGTATGGGATGATTGACCTCTTATTCTTGCTAACCATTTTTGTAT GGTTTTGGTTATGCACATTTGCAGGGCTTGTTATGGAACCACTAAATATTGTCATGCATGGCTCAGAAACATGGTTTGAA AATATCAAAATCCTGTATAGATTTTTAACATGTTACATAAATAATTAAGCTTTTAATTGAGGATAGATCTTTATGACCAG CCTTGCAGCAATTCGGATTGTCTATATCTGCATGAGATTGGCTCTCAAGAAGATAGTTTCATAAAAGATGATATAGTTTC TGAATGCACTAGGTACTTCTCTTACCTTAAATGACTTTTAATATGGGACTTATTAAGCCACTTGCTTTTCTTATAATGGT TTACTCACTTGATTTATTGTTTTGAAGAAGCCGTCTTCAACAAATTACCGGTGCTGCATACAATTTGCAACGGCGGTCAG GGAATGTACTGCCTCCTCCAATGGATGATTGTGCAAATAATTCTTCAGGAAACCCCATTGTGAAAAACGCTTCAAATGTA GGACATTTTTCATGCCCTTCAACTCTTGCGTTGTTGCGATATTTAGTGGTTTTTCCCAGATTGATTGTACTGCTGGAAAA TTTAGTTTGTGCACTCTGCACCTGAATATGTAGGTACTAACGTTTTATTTTGGTCGTGGAGCAGAATTCAGTTAGCATTG TAAGAGGTTCGCCTCCTAATGGAAGTTCTGGGAGGCCTATGGCTCTTCCTGCTGCTGCATGGTAATGTCTAATTTTGTAT TTTGCTTTGAGTGTTCCAAGCATTTTAAAGATAATGAACATTTCAATCTTGTTCATTAGGGGTACACGGGCTACAAATTG TAAGCCAGCTGCTGGAGGTGTGTTATGTCCAAATGGAGTGTCCAATCCCAAACCTGATCCAATCAGCAGTACCCTACCCT TTTCCTCAGCTGTTGTAGGCACAAATCAGGCTTCAATACAAAGTGGTGCGGCAAAGAGACCACCGTCAAGTGATGGGAGT CATAGTATTACACCTGGAGTCAATAATAATAGCATAGATGTCCTTGGCAGTGCTTGTGAAAAAAAATTGCCTTCTGATGT TTCTTCAACACCTGTGAATTTGAACAGCCAGTTGTCTTCTCTACCATTAGCTAAAGATTCTGATAGAGGGAGATGTTCTA CATCAGAGACAACAAATTCTATTGGCAGCTTTGGTCATGAGGAAGCAATTACTTCTACCAATGAAGAGATTCAGAATTTG TCCTATGAGTTGTCCTCTGGAAACACTGATAGAAATGCCCTAAATGAACACCACAACCTATCCAAACCTAGCAGCCCACC TCCTGATAATGTCCTGGTTAATTCTATGCAATCTCACAGATCACAGTATAATGCTGACAAATTTAGTGATCCGGTAATAA CAAATACTGACAGTAAAGGTGCTATATCAGATAATGAGGTTCGTACATTGAAGGAAGAATATAATTTGAGATTGGATTCT CAATCTCAAGTAGTATCAGATAATGCTGAAGTGGAAGATGATGTGACGTCTTTTGATAATCAGAGACTTAAGGATCCAGA AGTTTTGTGTCGTTCTTATTTGCCAAAGTCGAGTTCCCTTAGTGTCTCCAACCATTCAAGTCCTCATATTCTGCAGCATG GGGAACCTTGTACTGTTATAAATGCTGGTTCTTTAGCTGCAGATAATAAAAATGGGGATGACTCACTATTACATGGGTCT AATGTATTAGGCAATGGACATCCTGAGAAATTGGTCAGCACCAACTCTTATGGGTTGCTTCATGAGGAAAGGAACGAGCA ATGCATTGGAAGATTAGTTAGTGAAGCAGTTAATTGTGGAAGTGATGCTGCTGTGGATAAGGGCGAGAGTAGTATAATTT CAAATATATTGTCCATGGATTTTGATACCTGTGATGACTCACTAATATCATCTGAGAGGTTGGCCAAGCTGTTGGGTGAC AACATCAACAACCAGAATGGCCCGCTAAAGAAATCTAGTTCTTGGAAAGTTCAAAGTAATCAATCAAGATTCTCTTTTGC AAGACAGGAGGAATCCAAAATCCAAGCCTTTGATGTACATCCATCTTATGGTGCCAACCAACAATTTCCAAAGAGCCCCT CACTCTTCCAGGGTTTTATGGAAAGAGACTTGTCTTTGGATAGGCTGGGTATTGCAAATGGCTTTCATGCCAATAACCTT GAGGAATCTGGAAATCTAGGCAATGGTCTTTTTGTTGCTTCTTCTAATAAGCCTTCCTGTGAGTATTTATAGCTTAATTA GACTGATTACTGTAGTTTTTATATTAGCATTTCCTATCATTGGTTCTGGATAGAACAGCTTACTGGCCAGATTTATTCTG TTTATTTCAATGTGGTGATAACATTCCTTTTTCAACTATGTGGTCAATTATATATCGGCACTGATTTTGACCAAGAGTTT TGTCACCGAGTTGAAAGTGAAATTGCTGCTCCTAAATTTGCCTTATCTTTGTAAAGACATCTAATGATCTTCCTATATTA TGGTTTTCAGCTGTTTCAAGAGCGCAGTTTTCAGCACCGCCAGGATTTTCAGTTCCAAGCAGGCCACCACCTCCTGGTTT CTCCTCTTATGAGAGAATGGGGCAGGCTTTTGACTCTACTTCTGGTTAGTTGTTTCTTGAACATGTCCATTATTTCTGCA AATTGGTTGAGTATAATAGTTATCCTTGTGACAGGTAATTCATTGCTTGACACATCTTTTTCACTGAGAAATTCATATCA GACACCCTCAACTGGAAATGTTGGTGGCGCAGGAGACATTGAATTTATGGATCCTGCTATTTTGGCAGTTGGTAAAGGGA GACTTCAAGGTACACTAAACAGCCCATCACTGGACGTTCCATCCAATTATTCCTCACAGTTGAACTACTTTGAAAATGAG GCCAGACTTCAATTATTGATGCAAAGATCTCTCTCACCACAGCAAAACCTTCGCGGGAATTCTTTTTCTCCGCTTGGTAA TTCTTATGGCATTTCTTCACAGTTAGATCAAACACAAGCCAGTAATCTGGCATCATATCCTCAGTTGTCCCTGCAGCAAT CTCATGATGCAGTCTTTCCAAATGGCCAATGGAATGGGTGGAATGAAATGCAGAGCAGTAATAATCTTAGTGTAGCTGAG CTTCTGAGAAATGAGAGACTTGGATTTAGCAAATTTTATAGAGGATTTGATGATTCAAAATATCAGATGCCAAATTCTGG AGATCTGTACAACAGGACATTTGGGATTTGAACTTATTGGCTGTATTTATAGACTATATTTCACAATGTTGACCAAGGTA AAGCCAAGCCTGAAATGGACAAACACAAATTTTCCCGTGTTGTCAAAGGTGATGGGTCCAGTGCATTACATGATGAGTCT TTTGGGCTACTACCCGATGATGAAACTCTTAAAAAGTGCAGTTTTTATCTGCAGCTGGTAATTATTCAAGCTTCATCTTT TCTTGCTTTCATTTTTATGCTTTAGTTGGCTTCTGATGGGACTTCAACTACTTGTCGGTCAACACTAAATTTAAAATATG TCAAGTATGAGAACTTCTAAGTGTAAGCACTAAATTCTGTCGCCTTTTTCTGTGTAGTTCGAGATTTGCGGAGGTGAGCT GGGTTGAGATTCAAGAAATCAATTGCAGATTGAAATATGATCTCATTGGCAGGTAGATATTGGTTGGTTTTCTCCCAGAA ATACAGATCATGGATTTTGTAAATCCGTTGACGATCAAATAATCTATTTGGTTTGATGGGTAATGAAATGAAAATAATTT TGGCATTAATTTTCATCTTGGTAGTGTTTGATAATCATATTTGGTGCGAAATTTGTGACCTTCAAACCGGGAAATTCCTT CCGTGTAACGATGTTGCTACCTTAGTTGATCTAGTGACTTTTTTACAGAGACTTTTTCTGATATTCAGTCTTCTGTGCAT ATAAATTTTTTAATGATAGTTAATCCCTTCAAATACACAGGTGGATGAGTTTCAAGTCTTGAGCTATATTTGTGGTTCCT GCCAATTGTCTTGCTTTGTTTTGTTACTCCTTATTGCATTTTGCTTTCTTGTGATTATTTAACTGGTTATCAGGCTAAAT AACAGCAAGGCCGGAGTAACTGGTGACACTTGATG
CDS sequence (LotjaGi3g1v0270600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGACGAAGGAGAAAGGTCATGCCCTCTCTGTGCTGAAGAGATGGATTTGACTGATCAGCAGTTGAAACCATGCAA ATGTGGCTATGAGATATGTGTCTGGTGTTGGCATCACATAATGGACATGGCTGAAAAGGATGACACAGAGGGACGATGCC CTGCATGTCGTTCTCCATATGATAAGGAAAAGATTGTCGGGATGGCTTCAAACTGTGACAGATTGTTGGCTGGGGTCCAT ATGGAAAGAAAAACGAAGAGCCAGAAAGCAAAATCTAAATCATCTGAAGGACGGAAGCAGCTCAGTAATGTGCGAGTGAT TCAGCGGAATCTTGTTTACATAATGGGATTGCCCCTCAATCTGGCAGATGAAGATCTTCTCCAGCGGCGGGAGTATTTTG GCCAGTATGGGAAGGTCTTAAAAGTGTCAATGTCCCGGACAGCAGCTGGTGTTGTTCAGCAGTTTCCGAACAATACTTGT AGTGTATATATTACTTATTCAAAGGAAGAAGAAGCAATTCGATGCATTCAAAATGTACATGGATTTGTTTTGGAGGGTAG ACCTTTAAGGGCTTGTTATGGAACCACTAAATATTGTCATGCATGGCTCAGAAACATGCCTTGCAGCAATTCGGATTGTC TATATCTGCATGAGATTGGCTCTCAAGAAGATAGTTTCATAAAAGATGATATAGTTTCTGAATGCACTAGCCGTCTTCAA CAAATTACCGGTGCTGCATACAATTTGCAACGGCGGTCAGGGAATGTACTGCCTCCTCCAATGGATGATTGTGCAAATAA TTCTTCAGGAAACCCCATTGTGAAAAACGCTTCAAATAATTCAGTTAGCATTGTAAGAGGTTCGCCTCCTAATGGAAGTT CTGGGAGGCCTATGGCTCTTCCTGCTGCTGCATGGGGTACACGGGCTACAAATTGTAAGCCAGCTGCTGGAGGTGTGTTA TGTCCAAATGGAGTGTCCAATCCCAAACCTGATCCAATCAGCAGTACCCTACCCTTTTCCTCAGCTGTTGTAGGCACAAA TCAGGCTTCAATACAAAGTGGTGCGGCAAAGAGACCACCGTCAAGTGATGGGAGTCATAGTATTACACCTGGAGTCAATA ATAATAGCATAGATGTCCTTGGCAGTGCTTGTGAAAAAAAATTGCCTTCTGATGTTTCTTCAACACCTGTGAATTTGAAC AGCCAGTTGTCTTCTCTACCATTAGCTAAAGATTCTGATAGAGGGAGATGTTCTACATCAGAGACAACAAATTCTATTGG CAGCTTTGGTCATGAGGAAGCAATTACTTCTACCAATGAAGAGATTCAGAATTTGTCCTATGAGTTGTCCTCTGGAAACA CTGATAGAAATGCCCTAAATGAACACCACAACCTATCCAAACCTAGCAGCCCACCTCCTGATAATGTCCTGGTTAATTCT ATGCAATCTCACAGATCACAGTATAATGCTGACAAATTTAGTGATCCGGTAATAACAAATACTGACAGTAAAGGTGCTAT ATCAGATAATGAGGTTCGTACATTGAAGGAAGAATATAATTTGAGATTGGATTCTCAATCTCAAGTAGTATCAGATAATG CTGAAGTGGAAGATGATGTGACGTCTTTTGATAATCAGAGACTTAAGGATCCAGAAGTTTTGTGTCGTTCTTATTTGCCA AAGTCGAGTTCCCTTAGTGTCTCCAACCATTCAAGTCCTCATATTCTGCAGCATGGGGAACCTTGTACTGTTATAAATGC TGGTTCTTTAGCTGCAGATAATAAAAATGGGGATGACTCACTATTACATGGGTCTAATGTATTAGGCAATGGACATCCTG AGAAATTGGTCAGCACCAACTCTTATGGGTTGCTTCATGAGGAAAGGAACGAGCAATGCATTGGAAGATTAGTTAGTGAA GCAGTTAATTGTGGAAGTGATGCTGCTGTGGATAAGGGCGAGAGTAGTATAATTTCAAATATATTGTCCATGGATTTTGA TACCTGTGATGACTCACTAATATCATCTGAGAGGTTGGCCAAGCTGTTGGGTGACAACATCAACAACCAGAATGGCCCGC TAAAGAAATCTAGTTCTTGGAAAGTTCAAAGTAATCAATCAAGATTCTCTTTTGCAAGACAGGAGGAATCCAAAATCCAA GCCTTTGATGTACATCCATCTTATGGTGCCAACCAACAATTTCCAAAGAGCCCCTCACTCTTCCAGGGTTTTATGGAAAG AGACTTGTCTTTGGATAGGCTGGGTATTGCAAATGGCTTTCATGCCAATAACCTTGAGGAATCTGGAAATCTAGGCAATG GTCTTTTTGTTGCTTCTTCTAATAAGCCTTCCTCTGTTTCAAGAGCGCAGTTTTCAGCACCGCCAGGATTTTCAGTTCCA AGCAGGCCACCACCTCCTGGTTTCTCCTCTTATGAGAGAATGGGGCAGGCTTTTGACTCTACTTCTGGTAATTCATTGCT TGACACATCTTTTTCACTGAGAAATTCATATCAGACACCCTCAACTGGAAATGTTGGTGGCGCAGGAGACATTGAATTTA TGGATCCTGCTATTTTGGCAGTTGGTAAAGGGAGACTTCAAGGTACACTAAACAGCCCATCACTGGACGTTCCATCCAAT TATTCCTCACAGTTGAACTACTTTGAAAATGAGGCCAGACTTCAATTATTGATGCAAAGATCTCTCTCACCACAGCAAAA CCTTCGCGGGAATTCTTTTTCTCCGCTTGGTAATTCTTATGGCATTTCTTCACAGTTAGATCAAACACAAGCCAGTAATC TGGCATCATATCCTCAGTTGTCCCTGCAGCAATCTCATGATGCAGTCTTTCCAAATGGCCAATGGAATGGGTGGAATGAA ATGCAGAGCAGTAATAATCTTAGTGTAGCTGAGCTTCTGAGAAATGAGAGACTTGGATTTAGCAAATTTTATAGAGGATT TGATGATTCAAAATATCAGATGCCAAATTCTGGAGATCTGTACAACAGGACATTTGGGATTTGA
Protein sequence (LotjaGi3g1v0270600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDEGERSCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPYDKEKIVGMASNCDRLLAGVH MERKTKSQKAKSKSSEGRKQLSNVRVIQRNLVYIMGLPLNLADEDLLQRREYFGQYGKVLKVSMSRTAAGVVQQFPNNTC SVYITYSKEEEAIRCIQNVHGFVLEGRPLRACYGTTKYCHAWLRNMPCSNSDCLYLHEIGSQEDSFIKDDIVSECTSRLQ QITGAAYNLQRRSGNVLPPPMDDCANNSSGNPIVKNASNNSVSIVRGSPPNGSSGRPMALPAAAWGTRATNCKPAAGGVL CPNGVSNPKPDPISSTLPFSSAVVGTNQASIQSGAAKRPPSSDGSHSITPGVNNNSIDVLGSACEKKLPSDVSSTPVNLN SQLSSLPLAKDSDRGRCSTSETTNSIGSFGHEEAITSTNEEIQNLSYELSSGNTDRNALNEHHNLSKPSSPPPDNVLVNS MQSHRSQYNADKFSDPVITNTDSKGAISDNEVRTLKEEYNLRLDSQSQVVSDNAEVEDDVTSFDNQRLKDPEVLCRSYLP KSSSLSVSNHSSPHILQHGEPCTVINAGSLAADNKNGDDSLLHGSNVLGNGHPEKLVSTNSYGLLHEERNEQCIGRLVSE AVNCGSDAAVDKGESSIISNILSMDFDTCDDSLISSERLAKLLGDNINNQNGPLKKSSSWKVQSNQSRFSFARQEESKIQ AFDVHPSYGANQQFPKSPSLFQGFMERDLSLDRLGIANGFHANNLEESGNLGNGLFVASSNKPSSVSRAQFSAPPGFSVP SRPPPPGFSSYERMGQAFDSTSGNSLLDTSFSLRNSYQTPSTGNVGGAGDIEFMDPAILAVGKGRLQGTLNSPSLDVPSN YSSQLNYFENEARLQLLMQRSLSPQQNLRGNSFSPLGNSYGISSQLDQTQASNLASYPQLSLQQSHDAVFPNGQWNGWNE MQSSNNLSVAELLRNERLGFSKFYRGFDDSKYQMPNSGDLYNRTFGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1007 | 1007 | 0.0 | ||
| PANTHER | 1 | 1007 | 1007 | 0.0 | – | |
| Gene3D | 1 | 75 | 75 | 2.0E-20 | ||
| SUPERFAMILY | 3 | 66 | 64 | 1.96E-13 | – | |
| CDD | 9 | 58 | 50 | 7.76077E-23 | ||
| ProSiteProfiles | 9 | 57 | 49 | 9.671 | ||
| Pfam | 9 | 61 | 53 | 5.6E-21 | – | |
| SUPERFAMILY | 104 | 190 | 87 | 9.23E-15 | ||
| CDD | 105 | 204 | 100 | 2.653E-51 | ||
| ProSiteProfiles | 110 | 196 | 87 | 10.94 | ||
| SMART | 111 | 192 | 82 | 7.9E-13 | ||
| SMART | 111 | 192 | 82 | 1.5E-4 | ||
| Gene3D | 111 | 192 | 82 | 7.7E-25 | ||
| Pfam | 112 | 190 | 79 | 8.5E-7 | ||
| MobiDBLite | 350 | 374 | 25 | - | – | |
| MobiDBLite | 387 | 433 | 47 | - | – | |
| MobiDBLite | 388 | 408 | 21 | - | – | |
| MobiDBLite | 418 | 433 | 16 | - | – | |
| MobiDBLite | 450 | 479 | 30 | - | – | |
| MobiDBLite | 787 | 806 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Cellular component | CCR4-NOT complex | The evolutionarily conserved CCR4-NOT complex is involved in several aspects of mRNA metabolism, including repression and activation of mRNA initiation, control of mRNA elongation, and the deadenylation and subsequent degradation of mRNA. In Saccharomyces the CCR4-NOT complex comprises a core complex of 9 proteins (Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p), Caf4p, Caf16p, and several less well characterized proteins. |
Expression pattern of LotjaGi3g1v0270600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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