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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0470700 |
| Transcript ID | LotjaGi3g1v0470700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A151R8Y4|A0A151R8Y4_CAJCA DnaJ protein isogeny ANJ1; Found in the gene: LotjaGi3g1v0470700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88618504..88620837) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTGGCAGAGCGCCGCCGAAGAAGAGTGACAGCACCAGGTACTACGACATCTTGGGTGTCTCCAAGACCGCTTCTCA AGATGATTTGAAGAAAGCTTACAAGAAAGCCGCCATTAAGAATCACCCTGATAAGGGTGGTGATCCTGAAAAGGTTGCTA ATCTCATCTTAATTTTCTTCGTTTTTTAGTATTATTTTTGATTAATTGTTTGTTTTAGGGTTGATTAATTATCTTAATTG TTTGATTTGGGGTTTTGTGGTTAATTTAGATTGCAAAAGGGGTTTTGTGGTTTTGTCGATATTTTGACTGATTTAGGGTT GAAATTTGTCGAAAAATTGGAAATTTTGTTAGTTTGTGGGGAGAATTTGTGGTGGGGTTTGGAGTAGTGTGGTACTGTGT TGCTGAATTACTTTGAGTTGTGCTGTATAGAAGTTGGAATTCATAGTTTCATTCTGATAATGTAGTGGTAGGGAGTGGTG AGATTGCAAAAGCTAGTAAGGTGAGGCTTGAGGTTGACATGTTTTCTATCTAATTGATGGTTTTTTTATTTGGGGTGTAG TTCAAGGAGTTGGCACAAGCTTATGAGGTTCTGAATGACCCTGAGAAGCGCGAGATATATGATAATTATGGTGAAGATGC ACTTAAGGAAGGAATGGGTGGTGGAGGAGGTGGGGGTCATGACCCGTTTGACATATTCTCATCTTTCTTTGGTGGGAGTC CCTTTTCATCAGGTGATTATTATTAAACTAATGATTGGCTGTTTTTTGGATTTTGACTCGTTTCCATCACTTAATTGTTG TGTGGTTTGTTTAGCTTAAAGGGGTTTTTGGTTCATGTGAACAGGTGGTGGTGGTAGTCGAGGGCGGAGGCAGAGACGTG GAGAAGATGTTGTTTACCCTCTTAAGGTCTCTCTGGAGGACCTTTACCTCGGGGCAGCTAAGAAGCTTTCCCTCTCGAGA AATGTCTTATGCTCCAAGTGCAATGGGTGGGTTTTATAACAATTTTGGTTTTGTTGAAATTTTAGTGAAAAATTACCTTT GCAGTAAGTTTTTTTTTTTTATGATATATGCGGTTCAAAACACAAATTAAACTTGTTCGAAATACTAGCAACATTCTTTT GAATACATTGTATACCACATTCTTCATGAATGGTTTTTCTTTTTTTCTTTCAAAAATCCACACCTAAAAAACTGATCAAA TTAAAAAGCGTATTGACTTTTTTTAAAGTGGATCAGTTATAGTGTCTTTTGTGTATTATTAATGTCTCTCTTTACTTTTT GCATAGCTTTTGCCCATTTTTAAGACAGGATTACTTACATTACCGGTTGTGTTTTACTTGATTCCAGCAAAGGTTCCAAG TCCGGGGCCTCCCTGAAGTGTCCTGGTTGTCAAGGATCTGGCATGAAGGTTTCTATAAGACACATAGGTCCATCAATGAT TCAGCAAATGCAGCATCCTTGCAATGAATGTAAGGGTACTGGAGAAACTATAAATGATAGGGACCGCTGCCCACAGTGCA AGGGTGATAAGGTTTCCCAAGAGAAGAAAGTACTTGAAGTTTTCGTGGAGAAGGGAATGCAGAACCAGCAGAAGATTACA TTCCCTGGTGAAGCTGATGAAGCAGTACGTTGAAAGTTTTAGTGTCACTGACATTGAGTTTCATGAGTTATAGAGTTTAA TATGACTGAGTTGTTTGTGTTTTACAGCCAGATACAACTACTGGGGATATCGTGTTTGTGCTTCAATTGAAGGAACACCC CAAATTCAAAAGAAAGGCTGAAGACCTCTTTGTGGAGCACACCCTGTCCCTCACTGAGGCTTTATGTGGCTTCCAATTTG TGCTCACTCACTTGGATGGTCGGCAGCTCCTGATCAAATCAAACCCTGGGGAAGTTGTAAAGCCTGGTATGTAAATGATG CACATCTGAGCTGTTTGTCCCTCAATTTTGCTGTGTGATTAAAATGGCTATTTTATGTTGTGCTAAAAAATTGATTTTGG TGTGCATGTAGATTCATTTAAGGCCATCAATGATGAGGGAATGCCGATGTACCAGAGGCCATTTATGAAGGGGAAGCTTT ACATTCACTTCACTGTGGAATTCCCTGATTCTCTAAATCCTAATCAGGTTAAGGATTTGGAGGCTGCTCTGCCAGCTAAA CCTTCATCACAATTGACTGACATGGAGCTTGACGAGTGTGAGGAGACTACACTCCATGATGTCAATATGGAAGAGGAGAA TAGGAGGAAAGAGCAGCAAGCTCAGCAGGAGGCATATGATGAGGATGATGATATGCCTGGTGGTGCACAGAGGGTACAAT GCGCCCAGCAGTGA
CDS sequence (LotjaGi3g1v0470700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGCAGAGCGCCGCCGAAGAAGAGTGACAGCACCAGGTACTACGACATCTTGGGTGTCTCCAAGACCGCTTCTCA AGATGATTTGAAGAAAGCTTACAAGAAAGCCGCCATTAAGAATCACCCTGATAAGGGTGGTGATCCTGAAAAGTTCAAGG AGTTGGCACAAGCTTATGAGGTTCTGAATGACCCTGAGAAGCGCGAGATATATGATAATTATGGTGAAGATGCACTTAAG GAAGGAATGGGTGGTGGAGGAGGTGGGGGTCATGACCCGTTTGACATATTCTCATCTTTCTTTGGTGGGAGTGGTGGTGG TAGTCGAGGGCGGAGGCAGAGACGTGGAGAAGATGTTGTTTACCCTCTTAAGGTCTCTCTGGAGGACCTTTACCTCGGGG CAGCTAAGAAGCTTTCCCTCTCGAGAAATGTCTTATGCTCCAAGTGCAATGGCAAAGGTTCCAAGTCCGGGGCCTCCCTG AAGTGTCCTGGTTGTCAAGGATCTGGCATGAAGGTTTCTATAAGACACATAGGTCCATCAATGATTCAGCAAATGCAGCA TCCTTGCAATGAATGTAAGGGTACTGGAGAAACTATAAATGATAGGGACCGCTGCCCACAGTGCAAGGGTGATAAGGTTT CCCAAGAGAAGAAAGTACTTGAAGTTTTCGTGGAGAAGGGAATGCAGAACCAGCAGAAGATTACATTCCCTGGTGAAGCT GATGAAGCACCAGATACAACTACTGGGGATATCGTGTTTGTGCTTCAATTGAAGGAACACCCCAAATTCAAAAGAAAGGC TGAAGACCTCTTTGTGGAGCACACCCTGTCCCTCACTGAGGCTTTATGTGGCTTCCAATTTGTGCTCACTCACTTGGATG GTCGGCAGCTCCTGATCAAATCAAACCCTGGGGAAGTTGTAAAGCCTGATTCATTTAAGGCCATCAATGATGAGGGAATG CCGATGTACCAGAGGCCATTTATGAAGGGGAAGCTTTACATTCACTTCACTGTGGAATTCCCTGATTCTCTAAATCCTAA TCAGGTTAAGGATTTGGAGGCTGCTCTGCCAGCTAAACCTTCATCACAATTGACTGACATGGAGCTTGACGAGTGTGAGG AGACTACACTCCATGATGTCAATATGGAAGAGGAGAATAGGAGGAAAGAGCAGCAAGCTCAGCAGGAGGCATATGATGAG GATGATGATATGCCTGGTGGTGCACAGAGGGTACAATGCGCCCAGCAGTGA
Protein sequence (LotjaGi3g1v0470700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGRAPPKKSDSTRYYDILGVSKTASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLNDPEKREIYDNYGEDALK EGMGGGGGGGHDPFDIFSSFFGGSGGGSRGRRQRRGEDVVYPLKVSLEDLYLGAAKKLSLSRNVLCSKCNGKGSKSGASL KCPGCQGSGMKVSIRHIGPSMIQQMQHPCNECKGTGETINDRDRCPQCKGDKVSQEKKVLEVFVEKGMQNQQKITFPGEA DEAPDTTTGDIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAINDEGM PMYQRPFMKGKLYIHFTVEFPDSLNPNQVKDLEAALPAKPSSQLTDMELDECEETTLHDVNMEEENRRKEQQAQQEAYDE DDDMPGGAQRVQCAQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 416 | 416 | 2.5E-263 | – | |
| PANTHER | 1 | 416 | 416 | 2.5E-263 | – | |
| SUPERFAMILY | 10 | 110 | 101 | 8.24E-35 | ||
| Gene3D | 11 | 110 | 100 | 9.5E-30 | ||
| Hamap | 11 | 367 | 357 | 26.431 | ||
| SMART | 13 | 67 | 55 | 4.3E-26 | ||
| ProSiteProfiles | 14 | 75 | 62 | 22.67 | ||
| Pfam | 15 | 72 | 58 | 7.7E-22 | ||
| CDD | 15 | 64 | 50 | 3.45479E-10 | ||
| PRINTS | 16 | 34 | 19 | 1.7E-21 | ||
| PRINTS | 47 | 67 | 21 | 1.7E-21 | ||
| ProSitePatterns | 52 | 71 | 20 | - | ||
| PRINTS | 67 | 86 | 20 | 1.7E-21 | ||
| SUPERFAMILY | 112 | 270 | 159 | 5.89E-17 | ||
| CDD | 117 | 344 | 228 | 2.70765E-41 | – | |
| Pfam | 120 | 341 | 222 | 4.3E-38 | ||
| ProSiteProfiles | 133 | 217 | 85 | 23.972 | ||
| SUPERFAMILY | 143 | 214 | 72 | 3.14E-17 | ||
| Pfam | 146 | 212 | 67 | 1.8E-15 | ||
| CDD | 146 | 212 | 67 | 2.96185E-21 | ||
| Gene3D | 148 | 212 | 65 | 5.6E-22 | – | |
| Gene3D | 261 | 342 | 82 | 2.6E-25 | – | |
| SUPERFAMILY | 263 | 350 | 88 | 2.75E-19 | ||
| MobiDBLite | 375 | 416 | 42 | - | – | |
| MobiDBLite | 375 | 395 | 21 | - | – | |
| Coils | 381 | 401 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | ||
| Molecular function | Heat shock protein binding | Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi3g1v0470700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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