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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0331500 |
Transcript ID | LotjaGi4g1v0331500.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | ATP-citrate synthase, putative; TAIR: AT3G06650.1 ATP-citrate lyase B-1; Swiss-Prot: sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1; TrEMBL-Plants: tr|A6MZ92|A6MZ92_GLYUR ATP citrate lyase alpha subunit; Found in the gene: LotjaGi4g1v0331500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71051451..71055847) extracted from Lotus japonicus Gifu genome v1.2.
TGGTTGCGCCCTGCGTTTTTAAGTATGATGAATGAGCATTAGCTTTTAGCTGCTTTCACTTAATTGCTTAATCTTCTGAA GTTTGTATGTTGCTTAAAAGTTAAAAATAGTTTATAGATGTTTGATTCTTTAGAGAGATATCAATCTCTATTTGTGATTT TGGCTGATACAGAAAATATAAATATTTTAAATTTGATTTTCGGTATGGTCCCAATATTCATTTACATAGTTTCTAGTTTC TACTGCAATCGAATGTAATGCACCATTAGTATGTCATCAGATCTTTCTGTATCTTTGTCATGGCGACTGGACAACTATTC TCCCGTACGACACAAGCTTTGTTTTATAACTACAAGCAACTCCCCATCCAGCGGATGCTTGATTTTGACTTCCTTTGCGG TTCGTATAATCAGCTTTATCATCTCAAATTCTTAATGTTCTTCCAGAAAGAGAGTAACAAATTGTTAATATCCTGTCCTT GATTAATGGAAACCTTTTTGTTTTTGTCTATTTATAGGTAGGGAAACACCATCAGTTGCTGGCATAATTAATCCTGGTTC CGAGGGATTTCAAAAGCTCTTTTTTGGACAGGAAGAAATTGCCATCCCAGTTCATTCTACGTATGTGTTGTTCATTCATA ATTCATAAATTGTCCTTTTCAGCTTTAGGTTTGGATTTGGTGACTTGAACCTGGTCAGTGGTCAAGGAGTGTCTTTTCTT CATTTCAGTGTTTTCCTTACCATTTGCAACATGCTACTAGAATACAAAATAACCTAATGACTTTCTTCGAGTGTTCTTAG CCATATGTTGACTTCTTTTGTAGCATTGAAGCAGCTTGTGCTGCCCATCCTACAGCTGATGTGTTCATCAATTTTGCATC ATATAGAAGGTCAGTATTGTTATTGTTGTTGTTTTGAGACTGTAGGTATCTTATTTCACAGTACAATGAGAATAGTGCGT TTTGATATAATTGCAGTGCTGCAGCGTCATCCAAGGATGCCTTGAAGCAGCCAACAATTAGAGTTGTTGCTATTATTGCT GAAGGTGTACCAGAGTCAGACGCCAAGCAATTGATTGCATATGCTCGGGCAAACAATAAGGTCGGAGGAGAGATAGAAAT TTGAATCCAATCAACTTAATAGCTACACAGATTAACCTGGGAGTACTTATTTTAGTGCTGATGATGTTTGCTAGGTTGTT ATTGGCCCAGCCACTGTTGGTGGTATTCAAGCTGGTGCTTTTAAGATAGGTGACACAGCGGGAACTATAGACAATATAAT TCATTGCAAACTCTACAGGCCTGGATCTGTTGGGTTTGTTTCTAAATCGGTACGTAGTTCTTCATTTTTCTGTTTAGGTC ATTTTCATCTTTCATATTTGGAAGATAGACCTTTTCAGCTTTACTTGTAACTGTCTTCTAACCTTTAATATGTTGGTGAG CTCTCATCCCATTGTTGATTTAAGAATGGAAATTATGGTTCAAGAATCAAGAGTGATTGTCAATTTATTATAACGGAAGT GCAGTACTGCTTAATAGCATAAATTGGTAGTTAACTTGTGTGATAGGATTCTGTAACATTAGTAGCCACTGTTTTCCCCC TCTCTATTGATGAATAATGGTACTACTAGCTACTATAGGTATCTAAGATGATTTGTCAACACTTTGCATGTGAAATTACT TTTATCCAATGTTTGGTTAACCGAATGGTGATTTACAGTCACAAGAGCTTTTGAATTTGAGCTTTATTTCTTTTGGCTTG ATTTAATGAATAGACTGATGATTTTGAGAGAGGACAACCTTATTGAACTGCAGGGTGGTATGTCCAATGAGCTATACAAC ACTATTGGCCGTGTAACTGATGGAATTTATGAAGGTACTGCTCAGTTTATCTTTCAGTATTTCCTAATGCTAGTTCTGAT CCATATCCTGTTTTGCTAAAGGCATTGCCATTGGAGGAGATGTTTTTCCTGGTTCCACACTGTCTGACCATGTTTTGCGG TTTAACAACATATCACAGGTAAACATTTTCTTTCATCTTTTGCGATACAGCCTATAATATCTGCCACTCATAAAGAACTG TCAATGTAGATCATATTACTTTGTTGTCAATAATAAATCTGTATCCACATTTAAGCTTAGGTTAAAATGATTGTGGTACT TGGTGAACTTGGTGGGCGGGATGAGTATTCTCTAGTGGAAGCCCTGAAACAAGGGAAAGTGACGAAACCTGTTGTTGCCT GGGTTAGTGGCACCTGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCTGTATGTCACTGTTCCATTATCTTT TACTAATTCTCAATTAAAATATTTATGAGAGAGCCAATTCCTGATATCCATCAGCACTTGTATAAATTAGGGAGCTAAAA GTGGTGGTGAGATGGAATCTGCTCAAGGAAAGAATCAAGCACTAAGAGAAGCTGGTGCTGTTGTTCCCACTTCATATGAA GCTTTTGAAGCTTCAATAAAGGAAACATTTGACAAATTGGTTAGTTTATATTGCAAATGTTGTACTTCCTCACTGAGATT TTTACCTCGTCCCTCTTCTCCAAAGAGAGCAATGTTTTAAACAAGTCTTAGATTAGCTATAACATCATGGCTGGCTTTTC TTTTGTTAGGTTGAAGAAGGGAAGATCCCACAAGTGAAGGAGTTTACTCCTCCACCAATCCCTGAGGACCTTAACACTGC AATTAAGAGTGGAAAAGTCCGTGCTCCAACTCATATTATTTCCACCATCAGTGATGACAGAGGTATGATGGATCCTTCGT TTTGCTTGTTGTAACATAGAAGTGATGAATCTTTCTTTTTGCATCCTAGGCATAAATTTGATTGTTTAATTGACGTTCTC TTCCATTTTCTTCCTAGGTGAGGAGCCATGCTATGCTGGTGTACCTATGTCTTCCATTATTGAGAGGGGTTATGGTGTTG GTGATGTTATCTCTCTTTTGTGGTTCAAACGCAGCCTTCCTCGTTACTGTACTCAATTTATTGAGGTCAGCTATCCAGTA CTCCAGTCTTAACAGCTTTCGTTTAATCTTGTTCTCCCTTACTTTCACTATATGTCTGTCTCTTAAGTAATGAAACTGTC TATGCTCAAGCTTTTTTAGATATGTCACTGTGCTGTCAGTTTTTCATAATTTATATTACCTTTTCAAAGTAAATTATTGA TATCATCTTCTAACTTCTATTTTTTTTGTATGAATTACATTGGTCATTGGTCAGATATGCATCATGCTGTGTGCCGACCA CGGTCCTTGTGTCTCTGGTGCTCACAACACTATAGTGACAGCAAGGGCTGGGAAGGACCTTGTCTCCAGTCTTGTATCTG GTAAGTTAGGCGGTTAGGCCTTAACCTTTCTACTACTCTATTATGCTTGGTATCTCAGTAGTTTACCGTGTCTGGGTGCA TTAATATTTCCATTTAATGGTCAGTAATAATAGGCTTCTGAATCAGGTTTGCTTACAATTGGTCCTCGATTTGGGGGTGC CATTGATGATGCTGCTCGCTATTTCAAGGATGCTTGTGACAGGGTATGATTAGTAGGCTTTTCCTGTGATCTAGCATATT TCATGTTTGATGATGACCATCCTACTACTATTCTAACATGCGTTACTATGCTTTCTTGTTGCAGAGTCTTACACCTTATG AATTTGTTGAAGGCATGAAGAAGAAAGGCATTCGTGTGGCAGGAATAGGGCACAGGTGATGTATACTGTGTGTTTATTTA CTAGTTTATAACCTTTTTGCTTTCCCTTCTGTTACTTTAAAGATCTAAACTATGAAGCTCCGTTTTGTTTTGTAAAATAG AATCAAGAATAGGGATAACAAAGATAAGAGAGTTGAGCTGCTACAGAAGTTTGCACGCACACATTTTCCTTCTGTGAGAT ACATGGAATATGCTGTTGAAGTTGAAAGCTACACACTCACAAAGGCAAACAACCTAGTTCTAAACGTAGATGGTGCAATT GGATCACTTTTCTTGGATCTTCTTGCTGGTAGTGGAATGTTCACCAAACAAGAGATTGATGAAATAGTCGGTATTGGCTA TCTAAATGGGCTTTTTGTTCTGGCACGCTCCATTGGTCTGATTGGGTGAGTTTATATTGAAATTTGAACAATATACATTT GTATTGAAGAAGATTTTATTTATTGAAGTGAGCAGCATGTCATTCTATCTTGGAAATCAATGGGACTCAAAACATCCAAC TCCAAAAGTAGGAAGAATAAGACACATGCACACAGTATTCATGACTTAATTTAATTCATGTTTTTTTTTTCAAAATTTCA GGCATACCTTTGATCAAAAGAGATTGAAACAACCACTCTATCGCCACCCATGGGAGGATGTTCTTTACACAAAGTGA
CDS sequence (LotjaGi4g1v0331500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACTGGACAACTATTCTCCCGTACGACACAAGCTTTGTTTTATAACTACAAGCAACTCCCCATCCAGCGGATGCT TGATTTTGACTTCCTTTGCGGTAGGGAAACACCATCAGTTGCTGGCATAATTAATCCTGGTTCCGAGGGATTTCAAAAGC TCTTTTTTGGACAGGAAGAAATTGCCATCCCAGTTCATTCTACCATTGAAGCAGCTTGTGCTGCCCATCCTACAGCTGAT GTGTTCATCAATTTTGCATCATATAGAAGTGCTGCAGCGTCATCCAAGGATGCCTTGAAGCAGCCAACAATTAGAGTTGT TGCTATTATTGCTGAAGGTGTACCAGAGTCAGACGCCAAGCAATTGATTGCATATGCTCGGGCAAACAATAAGGTTGTTA TTGGCCCAGCCACTGTTGGTGGTATTCAAGCTGGTGCTTTTAAGATAGGTGACACAGCGGGAACTATAGACAATATAATT CATTGCAAACTCTACAGGCCTGGATCTGTTGGGTTTGTTTCTAAATCGGGTGGTATGTCCAATGAGCTATACAACACTAT TGGCCGTGTAACTGATGGAATTTATGAAGGCATTGCCATTGGAGGAGATGTTTTTCCTGGTTCCACACTGTCTGACCATG TTTTGCGGTTTAACAACATATCACAGGTTAAAATGATTGTGGTACTTGGTGAACTTGGTGGGCGGGATGAGTATTCTCTA GTGGAAGCCCTGAAACAAGGGAAAGTGACGAAACCTGTTGTTGCCTGGGTTAGTGGCACCTGTGCACGACTCTTCAAATC TGAAGTACAATTTGGTCATGCTGGAGCTAAAAGTGGTGGTGAGATGGAATCTGCTCAAGGAAAGAATCAAGCACTAAGAG AAGCTGGTGCTGTTGTTCCCACTTCATATGAAGCTTTTGAAGCTTCAATAAAGGAAACATTTGACAAATTGGTTGAAGAA GGGAAGATCCCACAAGTGAAGGAGTTTACTCCTCCACCAATCCCTGAGGACCTTAACACTGCAATTAAGAGTGGAAAAGT CCGTGCTCCAACTCATATTATTTCCACCATCAGTGATGACAGAGGTGAGGAGCCATGCTATGCTGGTGTACCTATGTCTT CCATTATTGAGAGGGGTTATGGTGTTGGTGATGTTATCTCTCTTTTGTGGTTCAAACGCAGCCTTCCTCGTTACTGTACT CAATTTATTGAGATATGCATCATGCTGTGTGCCGACCACGGTCCTTGTGTCTCTGGTGCTCACAACACTATAGTGACAGC AAGGGCTGGGAAGGACCTTGTCTCCAGTCTTGTATCTGGTTTGCTTACAATTGGTCCTCGATTTGGGGGTGCCATTGATG ATGCTGCTCGCTATTTCAAGGATGCTTGTGACAGGAGTCTTACACCTTATGAATTTGTTGAAGGCATGAAGAAGAAAGGC ATTCGTGTGGCAGGAATAGGGCACAGAATCAAGAATAGGGATAACAAAGATAAGAGAGTTGAGCTGCTACAGAAGTTTGC ACGCACACATTTTCCTTCTGTGAGATACATGGAATATGCTGTTGAAGTTGAAAGCTACACACTCACAAAGGCAAACAACC TAGTTCTAAACGTAGATGGTGCAATTGGATCACTTTTCTTGGATCTTCTTGCTGGTAGTGGAATGTTCACCAAACAAGAG ATTGATGAAATAGTCGGTATTGGCTATCTAAATGGGCTTTTTGTTCTGGCACGCTCCATTGGTCTGATTGGGCATACCTT TGATCAAAAGAGATTGAAACAACCACTCTATCGCCACCCATGGGAGGATGTTCTTTACACAAAGTGA
Protein sequence (LotjaGi4g1v0331500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATGQLFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPVHSTIEAACAAHPTAD VFINFASYRSAAASSKDALKQPTIRVVAIIAEGVPESDAKQLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNII HCKLYRPGSVGFVSKSGGMSNELYNTIGRVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNISQVKMIVVLGELGGRDEYSL VEALKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQGKNQALREAGAVVPTSYEAFEASIKETFDKLVEE GKIPQVKEFTPPPIPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIIERGYGVGDVISLLWFKRSLPRYCT QFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDACDRSLTPYEFVEGMKKKG IRVAGIGHRIKNRDNKDKRVELLQKFARTHFPSVRYMEYAVEVESYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQE IDEIVGIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 608 | 608 | 0.0 | – | |
PANTHER | 1 | 608 | 608 | 0.0 | – | |
Gene3D | 2 | 137 | 136 | 2.8E-50 | – | |
SUPERFAMILY | 8 | 136 | 129 | 8.53E-14 | ||
SUPERFAMILY | 134 | 606 | 473 | 5.1E-69 | ||
Gene3D | 138 | 333 | 196 | 6.7E-57 | ||
ProSitePatterns | 168 | 193 | 26 | - | ||
ProSitePatterns | 174 | 203 | 30 | - | ||
Pfam | 174 | 298 | 125 | 1.2E-12 | ||
ProSitePatterns | 259 | 275 | 17 | - | ||
CDD | 369 | 606 | 238 | 3.17919E-86 | – | |
Pfam | 399 | 594 | 196 | 6.7E-17 | ||
Gene3D | 400 | 587 | 188 | 2.7E-17 | ||
Gene3D | 450 | 559 | 110 | 2.7E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Molecular function | Transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer. |
Expression pattern of LotjaGi4g1v0331500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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