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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0335200 |
| Transcript ID | LotjaGi4g1v0335200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydrolipoyl dehydrogenase; TAIR: AT3G16950.1 lipoamide dehydrogenase 1; Swiss-Prot: sp|A8MS68|PLPD1_ARATH Dihydrolipoyl dehydrogenase 1, chloroplastic; TrEMBL-Plants: tr|G7JMT6|G7JMT6_MEDTR Dihydrolipoamide dehydrogenase; Found in the gene: LotjaGi4g1v0335200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71554979..71561229) extracted from Lotus japonicus Gifu genome v1.2.
TCTCATGTAATTTTTAACCAAAAAAGAACATATAGGAATATAGGATTTTCTTCTTACCATTCATTAATAAATGATGAAGA GGATAACTGTTTTTTTTTTTTTGCCTCAAGCACACAAAATCAATAGTTAACGAAAAGTGCAATGCAAAAAAAAGTGGTTT ATCCGCCGCACTTTGATTTCTCCGTCCCCTCTCATTTTCCTCCTAACTCCCAACGGACTCCTCGAGGTCCCTACTTCCAT CACTCTTATATCATCTTCCTCCTCCATCTCAGATCTCTCCGTTCGCCATTTCAACCTTCTCTCCCTCTCTCTCTTCCTCT TCCTCCAAAATGCAGTGCTCACTCTCACTCCCCTTCTCTCCCGCCTCCTCCTCTGCCGCCACATCTTCCAGATCGCACTC CTCCTTTCCCATCTCCACCGGCAAGCCTCTCAATCTCCGCTTCTGCGGTCTCAGGCGCGAGGCGTTAGGTTTAGGTTTCA CCACCTCACTCAACCGCCGCTGCCCCCAGCTTCCCAGCCGCCAACACGCCACCACTGTTTCCGCCGCTCTCTCCGACAAT GGCAGCTCTTCCAAATCGTTCGATTATGATTTGTTGATCATTGGTGCTGGTGTTGGTGGCCATGGCGCTGCGCTTCATGC TGTTGAGAAGGTTCGATCTCAGCGTTCTTATTTCAACTTCTGTTAATTCAGAATTCGTCAGTCAATTTTGTAACTGTAGT AACTGCAAATTAGTTCAATGCACATGAAAATTGATATAGCAAATTGTAGTTTATTTCATTGTTGAATGCTGATTGTGTGG TAGACTAAGCTGAAATTCTGTGTATGGTAATTTTTTTGTGAGAGATTTTAGTAACACAGAGTGGCTGCAGGGTCTGAAAA CAGCTGTTGTAGAGGGAGACGTGGTGGGAGGGACATGTGTGAACAGAGGATGTGTTCCTTCGAAAGCTCTTTTGGCGGTC AGTGGTCGCATGCGAGAATTGAAGAGCGATCATCACCTGAAGTCCTTGGGATTACAGGTAAGATAACAATGTTGAATTAT CAGGCTTCCTTTGGTTTGGAACACAACGCAGTTGTTGTAATGAGATTAAATAAGTATGATTTAGTCTAGTTGTAGAGAGA TAGGCGGTTATTACATGATTATTTTGCCTTTTTTTCGTTTGCTTGTTTCAGGTTTCTGCTGCTGGGTATGACAGACAAGC AGTCGCTGATCATGCTAACAATCTTGCATCTAAAATCCGGAGTAATTTGACCAACTCAATGAAGGCGCTTGGAGTAGACA TACTTACTGGGGTTGGGACTATATTGGTAAGTGGCATATTGACATTTTTGTACATTTTATGTTCTGAGGATTCTGTAGCA TCAGAAAATAAATAGTTGTATGATCACTTTAATTGAGCTTCAAATCTGTGAAAAAGAAAAAACTATTTGTTTATTAGCCA AGCATGAGATTGCAGAAGAAATATTTGACATTTTCTTTTGTGGCCTTATTTATGAATGTGCAGGGTTCCCAAAAGGTGAA AATTGGCTCTTCAAACATAGTAACTGCAAAAGATATCATCATTGCAACTGGTTCTGTTCCTTTCGTTCCTAAGGGTATTG AAGTTGATGGTGCGTATGATTTTTCCTTTCCTAACATTAATGTTTGATGTTCCTCATTCTAGTTTTACTTAATTTAGATT TGTCAGGCCTGTCTTCTGGCTACAAATAATTGAACTGAACTGTCTACCCCAAAATCTAGATTGGCATCAATTACTGGGCA TGCTATGGAAAAAGAAGTGATTAGTTTTCCATAATAAGTGCACACACATATAAAAGATAATATTTGAGAAAATCATTCTT TTTTGTTGGGAAGGTCGACCATGAAAGTAATTTATTTGCTAATAAGATTGATGAAGATATTATAAGGAATCAAAAAACAC TTATGCATGGCTTTCACCAATTTGGAAAAAACATACATAATAGGACCAAGAAGACTTATACATGGTTTTCATTTAATGCA AAAGTTAAAAAATTCTGTCTGGTCCTATATTTAATTCACGAGGAGATCTTCTTTCTTATTTGCGATCCCAGTTTGATGCC TGTATATAAATTTGAACTTTGTTTCTTTGTTTCTTTGTTCTCTTTCTCTTGATTTTTTCTTGGCTTATTCGAGTATACTC ATAATAAAAAAATCGACTATAACTGCAGGGAAGACTGTGATTACTAGTGACCATGCACTCAAACTGGAGTCTGTTCCAGA TTGGATAGCAATTGTAGGAAGTGGTTATATTGGCCTTGAATTCAGTGATGTATATACAGCACTTGGAAGTGAGGTCATAC ATCTTTGTGATACTTATCCTTTCTTTTTCCATTACATTTTGTTCATGAGAAATATTTGTAAGTAATTGATGTTATCTTTA AACATCAGAAATCTATGTCTGCGCTGTAAAATCATATCGTACTCGTCAAACTTGTAGTAGTACGAGAAGTGAACAAATAT TTCATCTTGATATCACTTCCTTGTTCATATAATTTATAATTAACACTGAAGGATTAGCTAAGTAGTAATTGAATTGTTAT TCTGCAGGTTACTTTTATTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATCAGCAAGTTGGCTCAGAGGG TTCTCATAAATCCCCGGAATATTGACTATCATACTGGAGTCTTTGCAACCAAGGTAACTACATCTTTGTAATTTCTTGGT CTAATTTTTGTTGGTTGGCTACTTTGACTGTTTGACATGCCCCAGTTCTCACGTTTTCTGTTTAGATCACTCCTGCAAGG GATGGAAAACCTGTCTTGATTGAGCTTATTGATGCAAAGACTAAAGAACCGAAGGACACTTTGGAGGTAACTTATTCTTT TTCCTGAAAACTTTTAGGTACATTATGTGCTCTTGACTAATATTTCCTATGCGGAAAAGGAGAAATTTATTTGTTGTAGT TAGAACTTAGAACATTTAGAAGTTATCTCACAATATCATCATTGTATCTTAGAATATTTTATAGTATCTTAATGATATGT TAGGATTAATTTCAATGTGTCATTATACCGAAGTACTTATCTCCATGTTTAATTAGGATTAGGAGTCTAGTATTTGTATA TGCAGAGGTTTGTGCTTTGTATTTTTGTATCACATAATACACCTTATCAGTTTAATATATTATTATTTAGTCACTATCTT TTTTTCCTTCTTTCCCTACCTCCCTATAATTTCAGAGTTTTCCAAAATTAGATTGGAAAACATGTGAACACGGAACATGC TCGTACCTAACTATTTAGTTTCTCTATTGTTATTACCTCTGTTCACATGCTTTGTACAACACCCATGCTTGGTATGGGAG CTGTCAACTAACTAAGATTTCATACCCAAAAGCCAGAAGTGGGTAATGAACTGGCAGTCTATTTAGCATAGAGAGAACCA TATGAGTGCATGAAGGCGGCACTAAGGCAGACATTTCAAGTTTATAACTGATTCATAACTAGACATTTTTTTAATTTCTC TTGCCCCTTCAGTATTCCCTTGGAACTTACCAGTTGACTTGCTGAAGTCCTTAATTTTGTAGTGTTATGCTGTGTGTGCA TTGCTATAAACCATCTAAAAATTCTCATAGTTTGACCACATTTTTTTACCTGTATATGTAATTTTTTGGATTTATTTCAA GTGTTTGTCTTTGTTTTGCCATAGGTGGATGCTGCATTAATAGCAACTGGCAGGGCTCCTTTCACGCAAGGTCTTGGGCT GGAGAATGTATGCATTTCTAACTTATATCTGTTTAAGATTGGAAGTTATCCCTAAAGGAAATGGTTGTATATTTTTTTAC TGTAACAAACTACCCCAAAAGCTTAAACAATTAGGTAAAGGCACATGAGTAGTTTCTTATCATATTTCTAACTTCCTAAT GCAAGAGTTCTTTGGGCTTGAAGCAGGGACAGTGCATGAGCTATTGATCTTATGCTGAAATTTCACCTTTTATTAAAATA ATGAGAGCAGCAAGGATTGAACTATAGAACATGTAATCATAAAGAGTCTAATTGCTTGTCACAAATCAATTATCCTGAAA ACCCTAGTTGTTGAGTGGAACACGCTAATAGTTTTATATTATACTTTTAACATGTACATATTTCCTGCAGATTGATGTGG TAACACAGCGTGGTTTTGTTCCGGTGGATGAGCGCATGCGAGTAGTTGATGCAAATGGCAAGCTGGTTTGTATCAATTTC TCATGCACTATTTATCCTTCTCTAACATTTGGTTACTGATAGGATGTGGAATGATAGGTTCCTCATTTGTACTGTATTGG TGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGGTAAGTGGAAACTAGTGTTATTTT TCCACCAATTTTTAGTTGTATGCTTTGTTTGACTTGATGAAAATATTTCTCTGACAGTGGTCGAACAAGTCACTGGAAGA GATCATGTGCTCAACCATCTAAGTATCCCCGCTGCTTGTTTTACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGGT ATATCAGAACTTTCAATGCAATAAATGTTTTAATGAATAAGTTCTCTTGTACTGTATGGTTTATTTTCTCTTCATTCTTC AGCTGCCACTCTTTTCGTCAGCGTTATTTATGCATTGGAGTTTAAACTTACTGCTTGTTGACTTCAGTTGAAGTTCTTAT GTCTTATTACTTAACATAAAATTTGCAGCCTCAAGCAAGGGAGAGAGGTGAAAAAGAGGGGTTTGAAGTAAGTGTTGCCA AAACAAGTTTTAAAGCTAACACAAAAGCCCTAGCAGAAAATGAAGGGGAAGGGATTGCCAAGGTTATATTCGTGTATCTT CTTCTGCCTTTAATATTTTAATTGTAGAGAAGCTTAAATTGTTAAATATTGCTGATAAGTTATTCACTTTCATCCTTTAT TCTCTGGATGCATTTATTTTTTCTCTGCCCTCACCAGGTGGACATTGCTAACTGTGATCTATACCTTCATACAGTTGATA TACAGACCTGACAACGGAGAGATACTAGGAGTTCATATTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAA TGCAATAGCATTAGGGACACGTATTCAGGTAAGATTTTCCACCATTGGTGTTATTTCTTGTTTATGTGCATTGGGCATTT AGTTATTAATGGTCACAAAGTCTTTCTCATATCCTGACCTGTTTATTTTGTAAATTTCACCATGTTGTGATACAATGATG CAGGATCTAAAACTTGCAGTTCATGCACATCCAACTTTGTCTGAGGTTCTTGATGAGCTATTTAAATCAGCAAAGGTGAG CTCACCTTAGTCCACTTTCAACATCATGTTGAGTATAACTATTGTCACTTACTTTATTTTCTGCCTAAATGGTTAGACAA TGAGAAGATAGGTTCTGACAGATTCTTGGTTATCAAATTGTTTGATTAAATTGTTTTAGGTAAACTGAAAGTGGTGGGTT TACTAATATAAACAAAGAGTTGAAACACAGAACATTCATCAAGATCAGGACTTGCATTTTCGTCCACACACAATAGCTAG TTTATTTTAGCAGCTGTATAACACGCGGCCTGTTTGATTACTATGGCAGGTTAAAGAACAAGCTTCTAGCCCAGTAAGTG AACCAGTTGCAGTCTAATCTTCCCAAATAAAGTATAAGTTTTTGAAGAAATTTGCTTGTATTAGGAACCTGCAAAATACT ACGCATCTTCAGGCGGAAGACATGAGAACATTCAGAATCCTGTAAAAGAAGGGAACCGTTTGAGGGAGATCACCAATGAC GTGATAATGGACACCCGCCGGATATTACTTGTATTCATATCTTTTTTATTAGGTATTTTCAGTGCCTGTCAAAGATACTT ACATTTATTATTGTTGCTTTTCTTTGAACTACTTTTATTCTAATTATAGTCAATGAGAAGGCCTTGTCATAGTGGCCTAT TTTTTCAGAGTGCTTCTAGTTTTGCACCCAATACATGTGTACTATTAACAATTTTCCTTCGATGAGATAATAAATTATGC TCTTTAAGAGTTTAGGGTTTCAGTGACCAAAAAAAAAAGAGTTTAGGGTTCTTTTGATGGGTTCTTTTGTCTTCTGCCCT GACCATGGAAGTTATTGTACCAGTTTATCAATTTATAGTATGACAAATTGCCAATATGAAATATGAAGCAGTCACATGTT CTTAATCTGAT
CDS sequence (LotjaGi4g1v0335200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTGCTCACTCTCACTCCCCTTCTCTCCCGCCTCCTCCTCTGCCGCCACATCTTCCAGATCGCACTCCTCCTTTCC CATCTCCACCGGCAAGCCTCTCAATCTCCGCTTCTGCGGTCTCAGGCGCGAGGCGTTAGGTTTAGGTTTCACCACCTCAC TCAACCGCCGCTGCCCCCAGCTTCCCAGCCGCCAACACGCCACCACTGTTTCCGCCGCTCTCTCCGACAATGGCAGCTCT TCCAAATCGTTCGATTATGATTTGTTGATCATTGGTGCTGGTGTTGGTGGCCATGGCGCTGCGCTTCATGCTGTTGAGAA GGGTCTGAAAACAGCTGTTGTAGAGGGAGACGTGGTGGGAGGGACATGTGTGAACAGAGGATGTGTTCCTTCGAAAGCTC TTTTGGCGGTCAGTGGTCGCATGCGAGAATTGAAGAGCGATCATCACCTGAAGTCCTTGGGATTACAGGTTTCTGCTGCT GGGTATGACAGACAAGCAGTCGCTGATCATGCTAACAATCTTGCATCTAAAATCCGGAGTAATTTGACCAACTCAATGAA GGCGCTTGGAGTAGACATACTTACTGGGGTTGGGACTATATTGGGTTCCCAAAAGGTGAAAATTGGCTCTTCAAACATAG TAACTGCAAAAGATATCATCATTGCAACTGGTTCTGTTCCTTTCGTTCCTAAGGGTATTGAAGTTGATGGGAAGACTGTG ATTACTAGTGACCATGCACTCAAACTGGAGTCTGTTCCAGATTGGATAGCAATTGTAGGAAGTGGTTATATTGGCCTTGA ATTCAGTGATGTATATACAGCACTTGGAAGTGAGGTTACTTTTATTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATC CTGAAATCAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCCGGAATATTGACTATCATACTGGAGTCTTTGCAACCAAG ATCACTCCTGCAAGGGATGGAAAACCTGTCTTGATTGAGCTTATTGATGCAAAGACTAAAGAACCGAAGGACACTTTGGA GGTGGATGCTGCATTAATAGCAACTGGCAGGGCTCCTTTCACGCAAGGTCTTGGGCTGGAGAATATTGATGTGGTAACAC AGCGTGGTTTTGTTCCGGTGGATGAGCGCATGCGAGTAGTTGATGCAAATGGCAAGCTGGTTCCTCATTTGTACTGTATT GGTGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTCGAACAAGTCACTGGAAG AGATCATGTGCTCAACCATCTAAGTATCCCCGCTGCTTGTTTTACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGC CTCAAGCAAGGGAGAGAGGTGAAAAAGAGGGGTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAAGCC CTAGCAGAAAATGAAGGGGAAGGGATTGCCAAGTTGATATACAGACCTGACAACGGAGAGATACTAGGAGTTCATATTTT TGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAATGCAATAGCATTAGGGACACGTATTCAGGATCTAAAACTTG CAGTTCATGCACATCCAACTTTGTCTGAGGTTCTTGATGAGCTATTTAAATCAGCAAAGGTTAAAGAACAAGCTTCTAGC CCAGTAAGTGAACCAGTTGCAGTCTAA
Protein sequence (LotjaGi4g1v0335200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQCSLSLPFSPASSSAATSSRSHSSFPISTGKPLNLRFCGLRREALGLGFTTSLNRRCPQLPSRQHATTVSAALSDNGSS SKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAVVEGDVVGGTCVNRGCVPSKALLAVSGRMRELKSDHHLKSLGLQVSAA GYDRQAVADHANNLASKIRSNLTNSMKALGVDILTGVGTILGSQKVKIGSSNIVTAKDIIIATGSVPFVPKGIEVDGKTV ITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFATK ITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVVDANGKLVPHLYCI GDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQARERGEKEGFEVSVAKTSFKANTKA LAENEGEGIAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDLKLAVHAHPTLSEVLDELFKSAKVKEQASS PVSEPVAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| MobiDBLite | 1 | 27 | 27 | - | – | |
| Phobius | 3 | 10 | 8 | - | – | |
| Phobius | 11 | 16 | 6 | - | – | |
| PANTHER | 11 | 562 | 552 | 0.0 | – | |
| PANTHER | 11 | 562 | 552 | 0.0 | – | |
| Phobius | 17 | 568 | 552 | - | – | |
| PIRSF | 53 | 551 | 499 | 3.2E-74 | ||
| SUPERFAMILY | 75 | 426 | 352 | 2.01E-50 | ||
| Pfam | 86 | 417 | 332 | 4.5E-58 | ||
| TIGRFAM | 86 | 554 | 469 | 2.1E-123 | ||
| Gene3D | 87 | 418 | 332 | 3.0E-97 | ||
| PRINTS | 87 | 109 | 23 | 5.6E-64 | – | |
| PRINTS | 88 | 107 | 20 | 3.6E-21 | – | |
| PRINTS | 119 | 134 | 16 | 5.6E-64 | – | |
| ProSitePatterns | 120 | 130 | 11 | - | ||
| PRINTS | 216 | 234 | 19 | 3.6E-21 | – | |
| PRINTS | 219 | 228 | 10 | 5.6E-64 | – | |
| Gene3D | 228 | 355 | 128 | 3.0E-97 | ||
| PRINTS | 255 | 280 | 26 | 5.6E-64 | – | |
| PRINTS | 255 | 273 | 19 | 3.6E-21 | – | |
| PRINTS | 348 | 364 | 17 | 3.6E-21 | – | |
| PRINTS | 349 | 363 | 15 | 5.6E-64 | – | |
| PRINTS | 382 | 404 | 23 | 3.6E-21 | – | |
| PRINTS | 397 | 404 | 8 | 5.6E-64 | – | |
| PRINTS | 432 | 453 | 22 | 5.6E-64 | – | |
| Gene3D | 435 | 559 | 125 | 1.0E-43 | ||
| SUPERFAMILY | 435 | 549 | 115 | 2.58E-36 | ||
| Pfam | 436 | 547 | 112 | 2.6E-31 | ||
| PRINTS | 501 | 516 | 16 | 5.6E-64 | – | |
| PRINTS | 523 | 543 | 21 | 5.6E-64 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Dihydrolipoyl dehydrogenase activity | Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0335200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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