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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0106200 |
| Transcript ID | LotjaGi5g1v0106200.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase; TAIR: AT2G35920.2 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|K7K9K1|K7K9K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:20070353..20079209) extracted from Lotus japonicus Gifu genome v1.2.
ATAAATAAATGCCTCCCTGGCATTTCCGCCCTACTCTCCACTGCCATTACTTCACCTCCATACACCCGCCCGTACCCAAA CTTTTCCCCGCTAACCTCCGCATCACAACCGCCACCCTCATGTCCTTCCGCCCCAACTACCAAGGCGGCGGCCGCAGAGG CGGTGCCTCATCCTCCGGTCGCGGCGGAGGCCGCCGTGGAGGCAGCGGCGGCCGTGGTGGCGGACGCGGCGAGCAACGAT GGTGGGACCCTGTTTGGCGAGCTGAGCGCCTGAGGCAACAACAGCCCGAGGTAAATAAATTCAATTTGATTGGAAAAATG GTTATTGGCTTAGAATTTTTGAAGTTGTAACAATTAGATGATTTTAATTTTTTTTTAATTTAATTTTTTTTGTGAGATGT AGAAGGAGGTGTTTAATGAGAATGAATGGTGGGATAAGATAGAGAAGATGCAAAGAGGAGGGGAACAGGAGCTGATTATC AAGCGTTACTTCAGCATTGGTGACCAGCAAACCCTAGCTGATATGGCTTATAAGCAGGGTCTTTACTTGTATGTTCATTG AATACTTTGAATTTCTTCATCATTTTACCCAGAAAGTGAATTGGGACTATACTTTCAATTTTATACTTTCAAGTTGATGT CATAATAGTATACATGCACCTGCTTGAAAAAAAATATTCAGAATTTTGCTGTTGGTTATGACTTATGATGCTGATTTCTA TTTATTTATAAAATAAAATGAATAAATAAAAATCTTTATTTTAGATGAGCTGAATCTGTTTGTCCTTATTAATAACTTAA TCTGATATCACTAGAAATAAATGATAACTAGTTTATTTCTCCCATTTTTCATTTTTTTCATGCTAATGTTTGATTCCTCA TCCCAAATTGTTTAATTCTAGTTTGATGCGATGTTTCGTTTAATGCTGTTGTGTGAGTTAGGGGTGATTACAGTCCAATC TAGGTCTTTCTGAGGATCAACCTCAAACTGAACTTCACGTTCTGTGAATTTCACAAGCCAAGCCATGAGCTCTTATGAAT TGCACTTGGCTAATGTGCCCAAAAATGTAGATAACTGAACATAAGTTATATAACATTAACTATATTAACAATAGTGTAAA TTAGATAACAATCTCAATTTCAAAACAATTAGGTTCTGTACCAAACACATCAGGTAATTGACCACACGAATCATGATTTT CACTGTAACTTCGATATACATGTATGTGTGTATTCAGTTATAACAAATTAGCAACAGATAAGGTCCTGTTTTAGAATTGT ATTGGTTAGAAAGTGGGCCAATGAAATAATTTGGCATGGACTGAGAGACTGCGGAAGGTGATGGTAGGCTAAAATACATT TAAAAGTGGTGTGTTTGGGATTTGACACCCTGACCAAGCTTTAACAAAATGCTTTAGTGCTATTGGCTCTGGGAAAATAT GTTATAAATAATTGTCACAAATTAGCATCCCAAAATGTCGCTTGGACAGTTGGACTGTGAAAATTGTTCATGGTAATGTG CACATGCACTAGACCAAACTGTACAGCAAACAAAGTTTGGTTTGGATTTGTTTAAGTACTTGGTGTGGATCAGATATTTT GACTCACTTATGTGTGCATATTCTTATGCCAGCAGTATTACGTTGGCATCTAGAAGTCCCAGGCAGTTATGCTGTGCAAA ACTTTCTGAGTTCTTGGCAGTAAATCAATTTGTGAAATAATCATTTCTTGCATAACATGCAATACATACTTAGCATTTAT TGATTCTACATGTGAACATGTAAAGCTCAATCTTGTATATTGTCCAACATCTTTAGTTCTTAATTATCTGATTTTTACTT GCGCAAAGAAAGCCATGCTTATAATAAGGGGAAGACTCTCGTTGTTAGCAAAGTTCCACTGCCTGATTACCGTGCAGATC TTGATGAGCGCCATGGAACAACACAGAAGGAGGTGGAGCAGACCTAGCTTATTTCATTCTCTGTTCACCAATTTTTATTT CAAAATTTCAAATATACTAACAATGTTTGGTCTTCCACAGATTAGAATGTCCACAGACATTGAGAGGAGAGTAGGGAATC TTTTGAACAGCTCACAGTCAATGGAGACAGAAACTGCTAGTTTGCCTTCTGTATCAACTGACCTTGGACATAAACAATCA ATGAGTACTACAAAGTCTGTTTCTTCACAGCAGACTGATTCTTCAAAGGAGAAACTTAGTGTTAAACTCAAGGAAAAGCA GAAACTTATGCAGGTAGCTAAGCATCTAGTAGGAATATGACTGTAAATCTGTTATCTTCTGTTCAAATTGATTGTGGCAG TTACTTGACTGCATTATGTTGCATTTTAAATTTATGTCAGAATTGGAAATATGCAGGCAAGTGATGCTTTGAAGGAAATG AAATCATTTAGGGAGAAGCTTCCTGCATTCAAAATGAAGTCTGAGTTTCTGAAAGCTGTTAGCAAAAATCAGGTGGGGAG AGCTATTTATCATGACAAAAATGTCGTATTTATCATCGGTTATTGGCTTGATGCTGATAGGTTTGTAAGAAATATTATCT ATAGATCTTCAAGAAATAAATAAATGGACAAACTTTGTTGCTTGACCTGTCAGTGGAAATGTGGAATAAATTGCCACTAT AATGCATGGTCTGTTTTGACTTCTTTTAATATTTTCACTTATAATTGTTTCCTGAATTATCATCAATTGATGTCATTCCA AGATTCTATTGTAATTTGGCTGATGTTAGCGCAGGTATTGGTAGTTTCAGGAGAGACAGGATGTGGCAAAACAACACAGC TGCCTCAATTCATTCTGGAAGAAGAAGTATCATGTTTGCGTGGAGCTGATTGCAACATAATTTGTACTCAGCCTCGTCGT GTATCTGCGATTTCTGTTGCAGCTCGAATATCTGCTGAACGGGGCGAGATCCTCGGTGAAACAGTCGGATACCACATCCG TCTTGAAACAAAACGTTCTGCAGAAACACGCCTTCTCTTCTGCACCACTGGTGTCTTACTTCGACAGTTGGTAATTTTAC CCAAACTGAGTCTCAGTGATTTTAAGATTTCATTTTCTGTCTAAACCTGCTCAAGTGTTTCTTCAATTGTCAATAACTGG TCTTTGTCTTAGATTCTAATGTTCTCCATGCTATTTGTACTGAGTTTTTTTTTTCTTGCGGCGGGGAGTGTGTGAGTGTG TGGGGGTGAGGGTGCGTTGTTACTTCATGTTAAGTAAAAAACCATTCATGAGCCCTCATCTCACAACTTAAGCTTTAGGG AGAGTTGGTAATTAGCATGATATTGGAGCCTCTATAACCATTTGTCAGGAATGAATTCCTTGCCGTCCTGTCCCCAATAT TCTAAATAAAGGTTGAATTTCAGTATAAGGTCAGGTAGCATGTGCATTATCCACACTTTAAGGCCACAAAGATCTTGTAT GAGGGATTGTGTTAGGAACAACATCAATCATGAGCCTTCACCTAGTAGCTTAAGCTTTTTCGATAGTTGGTCATTAACAC TTCTTGCCCTGCAGATTGTGGTCGTGATGCTTGTAACAAGACTAGTCTAAATATCTATCTTAAATTTTGTAGAGGATAAA TATAAAGCTAAAATCTTGCAGCCTTATCTGGGATATACATATGTTATTCCCAGCAGTCTGTGGGGTTGACATATTTTCTG TCTTCATTTTTGAATAGGTCCAAGATCCGGAGTTGACCGGCGTTAGTCATTTGCTGGTTGATGAAATTCATGAAAGAGGC ATGAATGAAGACTTTTTAATTATAATTTTACGTGATCTTCTTCCTCGACGCCCTGATTTACGCCTCATTGTAATGAGTGC TACTATCAACGCTGATTTGTTCTCGAATTACTTTGGAAATGCCCCAACTATACACATACCGGTATTGCATTTATTTTTAG ATTTTATGTTATTGAGTTATAATTTTGGATTTCAATGCAAATAGCATTGTTTTTTATTTTATTTGGACATATGTGCCAGG GATTTACTTTTCCTGTAGCGGAGCACTACCTAGAAGATGTGTTGGAGAAAACTCGATACACCATCAAGCCAGAGTTTGAC AATTTTGAGGGAAATTCAAGGAGAAAAAGGAAACAACAGGATTCTAAGAAGGATCCTTTGACTGAAATGTTTGAGGCATG TATATTTGACCTATCAGTCCATGTATTTACAGTCTTCGACTCTTCATGATATAACTAAGATGTTTTGAACTAATAATCCA TAAATTTAGGTCTAGAAGATTCATGAATCTGCTGATTTTGTTTCTTGGTCAATTAGAATCTTGTATTCGTGTCTTAGCGA TGTCTTATTGATGTCAATTCATGATACTGTGGTAGTTGCAGAGTCAATTTAGTGTTGGGATCAAAAGATTTGCACCTTAG TGATGTGCTTTCTTAATTTCTTTTCTTGCAATTAGGGATATGCTTTCTTAATTTCCTTATATCTTGTTGCTTGAGAGTTT TTTTTCCTCCTACTACTTTTACTAATGGGCTCACCTGTGGCCATTGCCATTGATAGGCCCCTGGTCCCAATTTAAATGGA AGGGGAAAAGTCAGTTAGATGAGAGAGAATAGATCCCAGATTTCATTATATAAGGATGTTTCGGGGGAGAATGGGATATG CATTTTCTTCCACCAGCTTGGAGACATAGGAGTTTTCCTTGGCTGGGAGCATTTTCTCTCTTTCTTCTGTATTTCCATAT TGTTCCTTGTTAATAATACAATCTTCCTAATGTTAGATAGGAATTATTCCTTTCAGTCATGGTAATATATAAAATTATAA ATGTAGGTATGGTTCTTAGTTCTTACCCATCTCCTTGTTCTTACAGGATGTTGATGTAGATACTCATTATAAGAACTACA GCTTGGGTGTTAGAAAATCTCTTGAAGCTTGGTCAGGTTCACAGATTGATTTGGGTCTGGTATGTATGTGCACAGTATTT TTTGTTTTTTTGTAGATGAATCTGTATTGAATGAATTAGATGCATCAGCTGTTGAGCAGACTCTTTTAGCTTAGTGTGAA ATTATCTGGTAAAAAAGCATTGGAAGTTTGATTATTTTTACTGGAGCTAGTTTAGAAGCCTCTGTTGAATTAGATGTATC AGTTGTTGAGCAGTCTCTTTTAGCTTAGTATGTAATTATCTGGTCAAGAAGCATCAAAAGTTTTGTTAGAATATAATATA AAACCATTCATGTGGCCCTTACATAACAGCTTAAGTTGTTGGGTAAAGGCCACATGAATGGTTTTATATTATATTCTAAC AATTTTTTATTTCAACCAGAGTATCCAACATTAACAGCATTGAGTAAATTCCTCACCCCAGTTGGTGGCATTTCACCACG ATAATTCTCTAAACTTGTAGTACTTGGAATTGCATGATCACTATTCACTTCTTATATTTTCGATCGCATTGAAATATGGT GAGCGTTGATCGTATCGAAATCCAGTTGAGGTCGTCCAAGGATTAGAACTCCTGAGATTCAAGGAGTTATCCATAATCCT TTAACGATCTCATCTGGATTTCGATACAATCAACGTTCACCATATTTCAATGCGATTGGAAATATAATAAGTGATCATGC AATTCTAAGTTAGAGAATTATCGTGATGAAACGCACTTTCCTCAAATGTTACCACCAATGTAGCAAGTCAAGCTCCAATA ATAATAATCAGAAGTAATCCCCATTCTATGCCAGAACAAACTTGTGAAGTGCCACCATCTGGGGCGAAGAATTTACTCAA TGCTGTTAATGTTGGATACTCTGGTTTCAACCAAAAAGAAGAAACTTCTGATATTAATTTGTCACTTAGGCTTGGTTTCA GATCATGAGGTTTTTTTCCCTTTTACACAAAAAAAATCTTGAGGCTTTATTACATTTTCAAACTATTATTGTTTTACTTC CATTCCATTATAGGTTAGGTTTTGTTAAATTTTGTTATTGGGACTTGGGTTGATTCACCTGGGGAAATGATAATGACAAA TTTAACAACTGGAGGCAAAGCCGTACTATACTTTCAACCTGGTGGATGTGTTAGAAATATATACTATAAAACCATTCATG TGGTTGTTTCAACCCTGAAGTATACTAATTACAGTCATACGACAGTGAACAAATATTCTAATCTGTGTTAAATATGGTAA TGAATCTAGATTAGTATTCTAATAGTTTGCTTCTTGACTTTCCTCTTTGTCGATGAATTTTGCATCCTATATTCTCTGTT GCAACTATTTTTCTGTTCGTACTAATTACTATCTTCCTTACTGATGTGGTCTATTCTTATATTGAAATTTCTTCAGTATG TTGAATCAGCTTGAAGAGTGCCTGTTTCATTTCGATTACTATGATGTTTCAGGTAGAGGCTTCAATTGAGTATATATGTC GAAATGAAGGTAGTGGAGCAATTCTTGTATTTCTTACCGGCTGGGATGAAATCTCTAAGCTACTTGACAAACTTAAGGGA AACAGATTGCTTGGAGATCCTAGCAAGTTCTTAATCCTTCCAATACATGGCTCAATGCCTACTGTCAACCAATGTGAAAT ATTTGATCGTCCTCCCCCTAACAAGAGGCAAGCAATAGCATGTTTCTTTTGCTAATATCAACATGACAGATTTTTGTTTC CAAAATTTGCTTGGAGAATTTTGTGAGGAACTTGTGTGAGCATTTCTTTAGCAAGTTGTATGTATAAATGGGCAAATGCA GAGGCAAAATGAAGACCATTGTGGCATCTAGGTTTTGATTCTTGCTATTTTGCAAATGCAGAAAAATTGTGCTAGCAACA AATATTGCTGAGAGTAGCATCACAATAGATGATGTTGTGTATGTCGTAGACTGTGGTAAAGCAAAGGAGACCAGCTATGA TGCTCTAAATAAGCTTGCCTGCTTGTTACCATCATGGATTTCAAAGGCTTCAGCTCGTCAGGTATTGATATTTTAAAACA TTTTGTTACAGCATACAAGGTCTATTGCTCTCATTGAACAAGCAACTCATCGCAGGTTAAGCTTGCTGTTATTGCTGAAT GTCGTTGTTCTAATTGTTGTGATTGACTCTACTGCTTTCTGCTTTGTCACCCCAAAAGAAATGGATAAGATAAAAGACAG AAACAGAGTATGAACAGGCAAATTTTACTTTTACTAATTGGTATACTATTTCAGAGACGCGGTCGTGCTGGTCGAGTGCA ACCCGGAGTGTGTTATAGGTTGTATCCTAAACTGATCCACGATGCTATGCCAGAGTATCAGTTAGCTGAAATCCTCCGAA CACCGTTGCAAGAGTTGTGCCTGCATATTAAAAGCTTGCAGCTTGGAACTGTGGCATCATTCTTAGAAAAGGCACTTCAG CCACCAGATTCTCTTGCGGTTCAGAATGCTATTGAACTTCTCAAAACAATTGGCGCATTAGATGAGAAAGAGGACCTTAC TCCACTGGGTATATATTTGCTGGATATGCTTGTCTCCTTAAGTTATTTAACCTAAGCTTTGGTTATTTTTTTAGCTAACT TGGTCTTTTACAGGTCAGCATCTTTGTACTATACCTTTGGACCCAAATATTGGAAAGATGCTTCTCATGGGCTCTATCTT TCAATGCCTCAATCCTGCCTTAACTATTGCTGCTGCTCTTGCTTATCGTAACCCATTTGTCTTACCCATAAACAGAAAAG AGGAAGCTGATGCAGCAAAAAGATCTTTTGCCGGTGATTCTTGCAGGTTAGTTATTGATATTTGATAGTGTGAGAAAAAA CTCTCTTCTGATAGTTTTCATTCAAGCTTTTCTGCGTTAACCATGCTTGTACTTCATTAGTTATGTATTTTTTATTCAGC GATCATATTGCGCTTCTTAAAGCTTTTGAAGGATGGAAGGAGGCAAAACGTAGTGGGAATGAAAAAGATTTTTGTTGGGA GAATTTCCTATCCCCAGCGACCTTGCGGTTGATTGATGATATGAGGATGCAATTCCTCAATTTATTATCTGACATTGGAT TTGTTGACAAGTCCAGGGGTGCTAATGTAAGCCCAAGTCTCTTTTGCTTTTTTATTTCTAATTGAAGTACTTTTTCCCAT CTTTATCTCAATTTAGTTTCACACTCTTGAATGCAAATTAGTGAAAAAGATTCCTATGGACTAATTTTATTAGTCTGGGA ACTTCTCACTTTTTCTGTTTAGTTCTGAAAGTTTTGGCTAATTCTGAACAAGGCCTAGGATTGTGGTTTATCAAACATAA TGCATGTCTCTGCAGGCTTACAACCAGTATAGTCATGATCTGGAGATGGTCTGTGCAATTCTTTGTGCTGGTCTGTACCC TAATGTTGTACAGTGCAAAAGAAGAGGAAAACGGACAGCACTCTACACTAAAGAAGTCGGGAAGGTCGACATCCACCCCT CTTCTGTTAACGCAGGGGTTCACATCTTTCCTCTGCCCTACTTGGTATATAGTGAAAAAGTGAAAACTACCAGCATCTAT ATTAGAGACTCCACTAACATTTCAGATTATGCCCTACTTCTATTTGGTGGTAATCTTGTCCCTTCCAAAAGTGGTGATGG CATAGAGATGCTTGGAGGTTACCTTCATTTCTCTGCTTCGAAGAGTGTCATTGAGTTGATAAAGGCAAATTTCATTTCCC TCAATCTTTTCACACCAAATTAAATGTCTTCGTAACTTGCTTTGAGACATGCTTGAACTAAACAATCTCATGATAACTGG TTATGCAGAAATTACGCGGGGAGCTTGACAAGCTTCTAAACAGAAAGATTGTAGAACCAGGGTTGGACGTTTCTGGTGAA GGAAAGGGAGTGGTTGCCGCTGCTGTTGAGTTGCTGCACAATCAAATGATTCGATGA
CDS sequence (LotjaGi5g1v0106200.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCACAGACATTGAGAGGAGAGTAGGGAATCTTTTGAACAGCTCACAGTCAATGGAGACAGAAACTGCTAGTTTGCC TTCTGTATCAACTGACCTTGGACATAAACAATCAATGAGTACTACAAAGTCTGTTTCTTCACAGCAGACTGATTCTTCAA AGGAGAAACTTAGTGTTAAACTCAAGGAAAAGCAGAAACTTATGCAGGCAAGTGATGCTTTGAAGGAAATGAAATCATTT AGGGAGAAGCTTCCTGCATTCAAAATGAAGTCTGAGTTTCTGAAAGCTGTTAGCAAAACGCAGGTATTGGTAGTTTCAGG AGAGACAGGATGTGGCAAAACAACACAGCTGCCTCAATTCATTCTGGAAGAAGAAGTATCATGTTTGCGTGGAGCTGATT GCAACATAATTTGTACTCAGCCTCGTCGTGTATCTGCGATTTCTGTTGCAGCTCGAATATCTGCTGAACGGGGCGAGATC CTCGGTGAAACAGTCGGATACCACATCCGTCTTGAAACAAAACGTTCTGCAGAAACACGCCTTCTCTTCTGCACCACTGG TGTCTTACTTCGACAGTTGGTCCAAGATCCGGAGTTGACCGGCGTTAGTCATTTGCTGGTTGATGAAATTCATGAAAGAG GCATGAATGAAGACTTTTTAATTATAATTTTACGTGATCTTCTTCCTCGACGCCCTGATTTACGCCTCATTGTAATGAGT GCTACTATCAACGCTGATTTGTTCTCGAATTACTTTGGAAATGCCCCAACTATACACATACCGGGATTTACTTTTCCTGT AGCGGAGCACTACCTAGAAGATGTGTTGGAGAAAACTCGATACACCATCAAGCCAGAGTTTGACAATTTTGAGGGAAATT CAAGGAGAAAAAGGAAACAACAGGATTCTAAGAAGGATCCTTTGACTGAAATGTTTGAGGATGTTGATGTAGATACTCAT TATAAGAACTACAGCTTGGGTGTTAGAAAATCTCTTGAAGCTTGGTCAGGTTCACAGATTGATTTGGGTCTGGTAGAGGC TTCAATTGAGTATATATGTCGAAATGAAGGTAGTGGAGCAATTCTTGTATTTCTTACCGGCTGGGATGAAATCTCTAAGC TACTTGACAAACTTAAGGGAAACAGATTGCTTGGAGATCCTAGCAAGTTCTTAATCCTTCCAATACATGGCTCAATGCCT ACTGTCAACCAATGTGAAATATTTGATCGTCCTCCCCCTAACAAGAGAAAAATTGTGCTAGCAACAAATATTGCTGAGAG TAGCATCACAATAGATGATGTTGTGTATGTCGTAGACTGTGGTAAAGCAAAGGAGACCAGCTATGATGCTCTAAATAAGC TTGCCTGCTTGTTACCATCATGGATTTCAAAGGCTTCAGCTCGTCAGAGACGCGGTCGTGCTGGTCGAGTGCAACCCGGA GTGTGTTATAGGTTGTATCCTAAACTGATCCACGATGCTATGCCAGAGTATCAGTTAGCTGAAATCCTCCGAACACCGTT GCAAGAGTTGTGCCTGCATATTAAAAGCTTGCAGCTTGGAACTGTGGCATCATTCTTAGAAAAGGCACTTCAGCCACCAG ATTCTCTTGCGGTTCAGAATGCTATTGAACTTCTCAAAACAATTGGCGCATTAGATGAGAAAGAGGACCTTACTCCACTG GGTCAGCATCTTTGTACTATACCTTTGGACCCAAATATTGGAAAGATGCTTCTCATGGGCTCTATCTTTCAATGCCTCAA TCCTGCCTTAACTATTGCTGCTGCTCTTGCTTATCGTAACCCATTTGTCTTACCCATAAACAGAAAAGAGGAAGCTGATG CAGCAAAAAGATCTTTTGCCGGTGATTCTTGCAGCGATCATATTGCGCTTCTTAAAGCTTTTGAAGGATGGAAGGAGGCA AAACGTAGTGGGAATGAAAAAGATTTTTGTTGGGAGAATTTCCTATCCCCAGCGACCTTGCGGTTGATTGATGATATGAG GATGCAATTCCTCAATTTATTATCTGACATTGGATTTGTTGACAAGTCCAGGGGTGCTAATGCTTACAACCAGTATAGTC ATGATCTGGAGATGGTCTGTGCAATTCTTTGTGCTGGTCTGTACCCTAATGTTGTACAGTGCAAAAGAAGAGGAAAACGG ACAGCACTCTACACTAAAGAAGTCGGGAAGGTCGACATCCACCCCTCTTCTGTTAACGCAGGGGTTCACATCTTTCCTCT GCCCTACTTGGTATATAGTGAAAAAGTGAAAACTACCAGCATCTATATTAGAGACTCCACTAACATTTCAGATTATGCCC TACTTCTATTTGGTGGTAATCTTGTCCCTTCCAAAAGTGGTGATGGCATAGAGATGCTTGGAGGTTACCTTCATTTCTCT GCTTCGAAGAGTGTCATTGAGTTGATAAAGAAATTACGCGGGGAGCTTGACAAGCTTCTAAACAGAAAGATTGTAGAACC AGGGTTGGACGTTTCTGGTGAAGGAAAGGGAGTGGTTGCCGCTGCTGTTGAGTTGCTGCACAATCAAATGATTCGATGA
Protein sequence (LotjaGi5g1v0106200.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTDIERRVGNLLNSSQSMETETASLPSVSTDLGHKQSMSTTKSVSSQQTDSSKEKLSVKLKEKQKLMQASDALKEMKSF REKLPAFKMKSEFLKAVSKTQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPRRVSAISVAARISAERGEI LGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLIVMS ATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNSRRKRKQQDSKKDPLTEMFEDVDVDTH YKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMP TVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASARQRRGRAGRVQPG VCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPL GQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEA KRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKR TALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFS ASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVELLHNQMIR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 54 | 54 | - | – | |
| MobiDBLite | 1 | 58 | 58 | - | – | |
| PANTHER | 16 | 845 | 830 | 0.0 | – | |
| PANTHER | 16 | 845 | 830 | 0.0 | – | |
| Gene3D | 31 | 262 | 232 | 7.6E-86 | – | |
| SMART | 82 | 275 | 194 | 1.2E-26 | ||
| SUPERFAMILY | 84 | 654 | 571 | 3.6E-80 | ||
| Pfam | 91 | 246 | 156 | 9.7E-7 | ||
| ProSiteProfiles | 94 | 261 | 168 | 18.4 | ||
| CDD | 101 | 260 | 160 | 4.51443E-93 | – | |
| ProSitePatterns | 203 | 212 | 10 | - | ||
| CDD | 265 | 486 | 222 | 7.10838E-63 | – | |
| Gene3D | 338 | 497 | 160 | 8.9E-54 | – | |
| ProSiteProfiles | 344 | 518 | 175 | 16.509 | ||
| Pfam | 349 | 477 | 129 | 7.1E-17 | ||
| SMART | 369 | 478 | 110 | 5.6E-20 | ||
| Gene3D | 520 | 621 | 102 | 7.8E-21 | – | |
| SMART | 540 | 631 | 92 | 5.7E-33 | ||
| Pfam | 541 | 628 | 88 | 9.6E-22 | ||
| Pfam | 700 | 781 | 82 | 4.4E-18 | ||
| Coils | 802 | 822 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi5g1v0106200.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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