Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0145300 |
Transcript ID | LotjaGi5g1v0145300.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Elongation factor Tu; TAIR: AT1G04170.1 eukaryotic translation initiation factor 2 gamma subunit; Swiss-Prot: sp|Q24208|IF2G_DROME Eukaryotic translation initiation factor 2 subunit 3; TrEMBL-Plants: tr|C6TAN4|C6TAN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0145300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:36853952..36858520) extracted from Lotus japonicus Gifu genome v1.2.
AGCTCCGGCGAGGACTTGCTCCATACGTTTTTAAAAGAGAGGGATTTAAACCACAATTTTTTCCGGTCAGGGACCTGTTT CAGACGGCGACACAAAGACAGGGACTAATATGAGGATTAAGCCAAAAAAAAAAAAGTTGCCATTTTATATAAAAATTCTT GGCGAACCCTAATCAGTATCCTATCAACAACGCACTCACACTCTATTCTGAAATCTTCTTCTTCCTCATCTGCGCCGAAA CCCTAACTCGAGGTACCCTTCTCGTTTTTCAACAACGCACTCACTCTATTCTGAAATCTTCTTCTTCCTCATCTGCGCCG AAACCCTAACTCGAGGTACCCCTTCTCGTTTTTCACTCTTTTTCTTTTCATGTTCTTGCTTTTTCTGCTTATGGGAACAC TGCCGTCTAGTATTGAGAATTTTGGATTGTGATATGCCAATAAAATTACAAATACAAATACAACTTCTCGTTTTTCACTC TTTTTCTTTTCATGTTCTTGCTTTTTCTGCTTATGGGAACTAGTATTGAGAATTTTGGATTGTGATATGCCAATAAAAAT ACAAATACAAATACAAATCGAATCGAATCTTTGTTTTTTTTGGTTACAATCGAATCGAATCTATTTATATAGGTCTGATA TATGAAGGCTGATATTGGAAAAGTTAAAAAAAAGATGCTGAACAATAATCAATATCTATATAAATGCAGATCAGATACTT TAGCTTCAAAAATCACTTCATTGGAAGCAGCCACCATGTCACGGAAGGGTTTGATGGAACAAGACCTGAGTAAGTTGGAT GTGTCAAAATTGCATCCACTTTCGCCTGAAGTCATATCTCGGCAAGCTACTATTAATATTGGTAATACGTTCTGTATTTA TTTCCGATTTGTTACAGCATTAGTATTTGAACTTGAACAATTTTGTGATTTAAAAAATCATGTTAGCTTCTTTCCATATT GATGGGCATTAATCCTGATGAGTAATATTGTAACCTGGCAGGCACCATAGGCCATGTGGCCCATGGAAAGTCAACCGTTG TGAAAGCAATATCAGGTGTTCAGGTATTCTTTTGTTTTAAATTTTTCATTTTTCACTAGGATAATGCTGTTTAACACTTT AACTTTGAACATATATGTAATTCCCGTTATATAGACTCTTTGTTGTCTCATGTGTGATCTGTTTCAAATGGAAATAAAGT ATCTACTCAATTGACATAAGTCATAACTCATAAGGGTTATTGCTAACCGCTTATATTTGCTCAGTATAAGTAGCTGTTAC TTGGTACCTACATCAAGTTTGTCAAAATGAGTTGCCATAGAATATGAAGTGGCAATCATCTCCTGGTGGTTACATAGATA TTTGACAATATTTTGATCAATTGAATATGCTACCCTCTTTATTTTCCATCTTCAATCTTTAAGAAGGATTATGCAAAACC TTGCAAGATTGTATTCTTGATATATTTCCCCTCAATGGTTTCCTGTGATTGTTGTGCAGACCGTGCGTTTTAAAAGTGAG TTGGAACGCAACATTACAATAAAGCTTGGCTATGCAAATGCAAAAATATATAAATGTGAAGATGCACGGTGTCCGAGGCC TATGAGCTACAAGTGGGGTTATTGTTTTGCACCCTCTTTCTCTATTATATTATCAGTTTATTTCAACTCTTGTGATGTGA TCTAACATTTTGCACAGGGCTTATGGAAGTGGGAAGGAAGATGCTCCTATGTGTGAAGTACCAGGGTTTGAAAACTGCAG GATGAAATTGTTGAGACATGTTTCTTTTGTCGATTGCCCGGTAAATTCCAGTAGTCATTTGCTAGCTAGGCTGTTTTATT CATGCTTTCATTAGATTTTAGATATAATGTAGGAGTATTTACGTTTTGGTTTTACGTTTCTTCCCCTCAACCCAATTCTT TTAATCCTAGGAAGATACTGTTATTGTTATGCGTGTGTATATGAATGTACTTATATACCTATATGTCTATTGACAAATTC TCAAGTGCTCTAGAGCAAGAGATAACACTTGTTCTTTACCATTAAATGTGTCCACCCTCAACCATGTAATCCATCATGAT GTCTCTGTAGTTTCATTTTTAATATATTTGATGTGATTCAGATCCAATGGCTTAGAATAAGAAACCTAAAATTTGCTTGT ATATTTTAGCTTTGACTGTTTCCCATATGGTGAGATTTTTATATTCCTATGGGAATTCTTTTTAGTAGAGTGTCAGGTGG CTACAGGTTTCCACTCTGCTAAATCATTGAATATATGTTTAGGTTGGTTGCTTTTACTTATGATTTCTGTTTTTACTTGG CCGATCTGTAGGGACATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTCTGCTACTCATT GCTGCTAATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCATTTAGCTGCGGTTGAAATTATGCGTCTGCAGCACATTAT AATCCTTCAGAACAAGGTAGACCTAATCCCAGAAAACGTGGCAATCAATCAGCATGAAGATATTCAGAAGTTCATTGCAG TAAGTGTTCTTTGAAGTGGTCTATGCTATACATGTGAATCCCTTACACTGTCCTGAGCATACTCTTCTTTTTTGGTGGTT TACCAGGGAACTGTTGCTGTTACGGCACCTGTGGTACCTATTTCAGCACAATTGAAGTATAACATTGATGTTGTGTGTGA ATATATTGTGAAAAAGATCCCAATCCCCGAAAGGAACTTCATTTCTCCACCAAATATGATATTAATTCGATCATTTGATG TCAATAAACCTGGTTATGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTGAGGGTAATTCTTTTTCTG GTCCATTTCCCAAATATAATTCTTCATTTGCACGACGAACTTGCAGATGTTAATATTTTTAATGGTTGGAATGATTCTAC TGTAGAATTTGAAAGTGTTTGGCGAATAATGCCAATTGCCAAGGGTGAGCCCTATTATACATGGATTCTTAATCAATGAG TAATACACGGCCTTCAATTTGTTGAATCTTTTTCTATTTTTGAAAACTTATTTACACATGTAATTTTTCAGAATACATGG AACATTGTATGCCATTCTGTTGACAAACAGAATGTCAGTATTTTGGTGTTTGGAATGATATCTGCCTTTACATTTATATG TATAATTTTTAAAATGTTAAGTCTGCTGTAGATTTTTGAAGTGTATGTTGTGTGCTTTATAATACATGGATGCTTAATGA ATGAGAAGCAAGTGGCCTTCTAATTTGTTGATTTTTGTTTTGGAAACTCTTGATGCATGTTATTTTCCAAAACTTTTACA GGGTGTAAAGCAAAGCTGACAATTTGTATTTTACAGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGGTT AATTGGTAAAGATGTGAATGGAAACATTCAATGCACACCCATATACTCCAGGATAGTTTCATTGTACGCTGAACAAAATG AGCTTCAATTTGCTGTGCCTGGAGGCCTTATTGGTGTTGGGACCACGATGGATCCTACTTTGACGCGTGGTGACCAGTTG GTAGGGCATATTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTTTGTTGAACTTGAGGTAGGTGGTTATTTAGTTCATAA TGACAAGTGGGGATAAATAACTTGCCTTTCAAAATATCTTCGTTATTCATTTTTACTTGTGTGTTAAGCTTCCTTGTCAT GACTTGCGAGAGAGATGACATTCAGTTCTCCTGTTGCTGGAAAAACTTTATTTGTAGATGAATTGGTGACTTGGTATTGC AGGTTAACTTTTTCTTGCTTCGGCGGCTTCTTGGTGTCCGAACAAAAGGCTCAGAGAGACAGGAAAAGGTAGCTAAGCTG ACCAAAGGAGAGCCGCTACTGTTGAACATTGGATCAATGTCAGCAGGTGGCAAAGTAATTGCTGTGAAGAATGACCTTGC TAAATTGCAACTCACTACCCCTGTGTGTACTAGCAAGGGTGAGAAGATCGCACTTAGTCGACGTGTCAAGAAGCTTTGGC GTCTTATCGGGTGGGGTCAAATTCAAGCCGGAATCACTCTTGATGTCCCTCCTGCCCCTGCACTGTGTTGAAATACAAAC ACCAGTTATAGAAACGTGAGATGAATTTAGGTATATGGGAAGGGAGACAATTATTTAACTTTCATAAACAAGTTTGTTTA TGTTGTGTTGTGAGACACCTGTTGTGTTGTTAGAGAAGAGAGCTGATAAATTATTTTGAACATTTAGAAGTAATTTAGTT ATTGTGAACAAATGAGGATGGTGAAGTGGGGGAATGGAAGCCGTAGTTTTGCCCCTCACTTGTTGGACTAAGCATTAAAA AAACATTGAATTTTATTTTAATTTTATCAATATTTCAAAAGCTTAATTGTACTTTTATAGTCTCATAAATTTACAAACTC ATGATTATAGCCGTCTAGTTTCAACCGCTCAAATTAAATATATCAATATTCAAAATTGAATAAATATGTTCAAGAGAAAG CCAAAGGTG
CDS sequence (LotjaGi5g1v0145300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACGGAAGGGTTTGATGGAACAAGACCTGAGTAAGTTGGATGTGTCAAAATTGCATCCACTTTCGCCTGAAGTCAT ATCTCGGCAAGCTACTATTAATATTGGCACCATAGGCCATGTGGCCCATGGAAAGTCAACCGTTGTGAAAGCAATATCAG GTGTTCAGACCGTGCGTTTTAAAAGTGAGTTGGAACGCAACATTACAATAAAGCTTGGCTATGCAAATGCAAAAATATAT AAATGTGAAGATGCACGGTGTCCGAGGCCTATGAGCTACAAGGCTTATGGAAGTGGGAAGGAAGATGCTCCTATGTGTGA AGTACCAGGGTTTGAAAACTGCAGGATGAAATTGTTGAGACATGTTTCTTTTGTCGATTGCCCGGGACATGATATTCTCA TGGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTCTGCTACTCATTGCTGCTAATGAAAGCTGCCCTCAACCT CAAACTTCTGAGCATTTAGCTGCGGTTGAAATTATGCGTCTGCAGCACATTATAATCCTTCAGAACAAGGTAGACCTAAT CCCAGAAAACGTGGCAATCAATCAGCATGAAGATATTCAGAAGTTCATTGCAGGAACTGTTGCTGTTACGGCACCTGTGG TACCTATTTCAGCACAATTGAAGTATAACATTGATGTTGTGTGTGAATATATTGTGAAAAAGATCCCAATCCCCGAAAGG AACTTCATTTCTCCACCAAATATGATATTAATTCGATCATTTGATGTCAATAAACCTGGTTATGAGGTTGATGAAATAAA AGGAGGTGTAGCTGGTGGAAGCATTCTGAGGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGGTTAATTG GTAAAGATGTGAATGGAAACATTCAATGCACACCCATATACTCCAGGATAGTTTCATTGTACGCTGAACAAAATGAGCTT CAATTTGCTGTGCCTGGAGGCCTTATTGGTGTTGGGACCACGATGGATCCTACTTTGACGCGTGGTGACCAGTTGGTAGG GCATATTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTTTGTTGAACTTGAGGTTAACTTTTTCTTGCTTCGGCGGCTTC TTGGTGTCCGAACAAAAGGCTCAGAGAGACAGGAAAAGGTAGCTAAGCTGACCAAAGGAGAGCCGCTACTGTTGAACATT GGATCAATGTCAGCAGGTGGCAAAGTAATTGCTGTGAAGAATGACCTTGCTAAATTGCAACTCACTACCCCTGTGTGTAC TAGCAAGGGTGAGAAGATCGCACTTAGTCGACGTGTCAAGAAGCTTTGGCGTCTTATCGGGTGGGGTCAAATTCAAGCCG GAATCACTCTTGATGTCCCTCCTGCCCCTGCACTGTGTTGA
Protein sequence (LotjaGi5g1v0145300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRKGLMEQDLSKLDVSKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKSELERNITIKLGYANAKIY KCEDARCPRPMSYKAYGSGKEDAPMCEVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQP QTSEHLAAVEIMRLQHIIILQNKVDLIPENVAINQHEDIQKFIAGTVAVTAPVVPISAQLKYNIDVVCEYIVKKIPIPER NFISPPNMILIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGLIGKDVNGNIQCTPIYSRIVSLYAEQNEL QFAVPGGLIGVGTTMDPTLTRGDQLVGHILGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQEKVAKLTKGEPLLLNI GSMSAGGKVIAVKNDLAKLQLTTPVCTSKGEKIALSRRVKKLWRLIGWGQIQAGITLDVPPAPALC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 463 | 463 | 8.2E-296 | – | |
PANTHER | 1 | 463 | 463 | 8.2E-296 | – | |
SUPERFAMILY | 30 | 236 | 207 | 6.85E-39 | ||
ProSiteProfiles | 30 | 239 | 210 | 34.924 | ||
Gene3D | 30 | 240 | 211 | 1.6E-63 | – | |
Pfam | 32 | 236 | 205 | 1.2E-22 | ||
CDD | 33 | 240 | 208 | 3.25345E-131 | – | |
PRINTS | 34 | 47 | 14 | 2.2E-11 | ||
PRINTS | 123 | 133 | 11 | 2.2E-11 | ||
PRINTS | 139 | 150 | 12 | 2.2E-11 | ||
PRINTS | 177 | 186 | 10 | 2.2E-11 | ||
SUPERFAMILY | 240 | 354 | 115 | 8.11E-35 | ||
CDD | 241 | 354 | 114 | 2.72217E-60 | – | |
Gene3D | 241 | 356 | 116 | 9.8E-48 | – | |
Pfam | 268 | 340 | 73 | 1.8E-8 | ||
SUPERFAMILY | 355 | 452 | 98 | 3.79E-29 | ||
Gene3D | 357 | 456 | 100 | 8.7E-37 | – | |
CDD | 357 | 451 | 95 | 3.85106E-44 | ||
Pfam | 362 | 451 | 90 | 3.4E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi5g1v0145300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…