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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0316700 |
| Transcript ID | LotjaGi5g1v0316700.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0S3SMF5|A0A0S3SMF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63438052..63446044) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAAAAAGAAGAAACAATCCCTAACTAAAGAAGGGCGCAGAGAGGGTTTTGGTTTGGTTTATGTCTCGCGGCTACAAC ACACACAAGCGTGAGACAAGTTTTTGTTTGCGAGAGTGAGAATTAGAGATTAGTTTAGTTTGGAGAATCACTTCTTTCAA ATAGTGGTTTAACAAAACTTAAACGAATAGAGAACCGTTGCTCACGCTCCCGCCATGGCCACCGTGATAGGTGAGGAGGA AGACAAGAAGGAGCACGCCAAAACACTCATCTGCGCCCTCAATCTCCTCTCACGCGACCTCCCTCTTCCCTCTCACCTCC TCACCTCCGTCTCTTCAATCTACCACAACAACCACCACGTTCGTAACGTAAACCTACCTCTTCGCTTTCAGCTCCAATTG CTTTTGTTTTTGGATTATTCTTATTGAGTTTCAATGTTTTGATTAGGATTGTGCAATGCTGTTTGTTAATGCAGGATGAT GTAGGGGATTCTGGAGAAGGTTTAATTGCAGATCTTGAAGATGCTGTGTTGAATCAGCGGCTGAGTCGTGTGTCAGGTTC CAAATTGGAGGAAGCGAGGGGAAACCGGTATCAAACTCAGATTCAAAACCGGTTGAACCAGCTTCAAGGTAGGAAGAATG CTTGTGTTCTGTATTTGTACTTGTTTACTTGGTATAGATTTTGGGATTAATTTGTATTTGTATTTCGAAGTATAGCTTGT GCGAGCCGAGCTTATTTAGTGAACTAGCAGGAATTATGATAATGATATGTATACATTTTTAGATTCGATATTCTGAACAT TGTTTGTATGAGTGTATACATTAAGTGGAAGTGATGTATTCTGAGTCTTGGCAATTTTACTGAAGAGCTGTGTCATTGTT TTGATTTGAATCAGAATTGCCTTCAAGCAGGGGAGATGACCTGCAGTCGAAGTGCCTGCTTGAATATTATGGACTAAAGG TAAAATTGAATTGTTGAAATAATTTTTCGATGCATAGTGTGGTGTGAGTAAAGTCTATAACCTTAATGCTTAGGGTATTG TAATGTAAGCCATGTCTAACTTCCACGAGTTGAATGCTGAATATTTTATGGTATTGCAGTCCTTCACTTTTTGTAAGTCA TTTTATGTCTACTTATCTTAATAGGTTTCATTCTTGATAGAAACTAGACAGAATTGCTTTCTGCTTATGTGATATGAGAT ATGAAACAGAAACCTATTTTCATTTGTTTTTTTCTGGTTTTCCTGAAGAGTGAACAAGTTTCATTAGTATTGGGCAAACA CAATTACAGATACAACAACTTTTTAGCTATGATGAAAGGCACGATTGAAAAATAATATCCAGTGGGGAAATTAGTTGAAT TATTTCATTTGCTTGTATCAACTATAACTGAGAAGTGACAAGAACTGTGTCCTTGTTGGCAAGGACTTCTTTTCTGACAG CTAGCAGAGTTGCAGTCAAAGGTTCGATCTGATGTGAGTGCTGAAAACTGGCTAAATGTTAAATGTGCATATCCTGACAG GCAATTGTTTGACTGGGGCATGATGAGATTGCGCCGTCCACTGTATGGTGTTGGAGATCCATTTGCCATGGATGCTGATG ATCAGTTAAAAAAGAAACGGGATGTTGAGGTGACTTTTTTATTTTTCAGCTAGCCCCCCAACAATTTGTTATGGGTTTGA AGTTTCCTTCCACCTTGGATAACATAAATTGTAGTAGTCCAAGGTGGAAGGTAAATTACTAAACAATTTGTAAACTAAAC AAGGCATATAGTGTGATGGTCCAGTTTCATTTTTCTGATATATGCATGAATTTTCTAGTATCTGAATGGGGAATTAATTT ACACCATACTGCTTATCTCATATATATCCTTAAATGCAGAGACTGTCAAGATTAGAAGAGGTGGAGAAAAACCATATAGA AACTAGAAAAAGGAAATTTTTTGCAGAAGTACTTGATACTGTCCGTGATTTCCAATTACAAATTCAAGCTTCTTTGAAGC GGAGAAAACAGAGGAATGATGGCATCCAGGTACACTATTCCCCATTCATTTGTTATAAATCATTTATATTAATTCGGAGA TATGTATGTATATCTATATATATATATATATATATATTTTGATGTATGTAGGTGTACTGTAACTTTTGGCCCATTAGAAT TACAAGTTTATGTGTCCTCTTCATATGATAATTAGGCATGTTAGGTGTATGCATGGACTTGAAGAGCTTTTTTGTTTCTA ACTTTAACTTTTGTGAAATTTGATTTATGTGCCAGTTGCATGTTTGATTTAGATCTCTATCTCTTCCTTAATTTCTCCTA AATTGTTATATTTTCTTTTTGTGCTTCAATTCTAGACCAAAAAAAGATATTAAAGCTTTGTTGAAATTCTGATTCTATAT CAGGGAGCTTGGACCTAACCTGTTAGAATTTATTGAGGTAGTTCCATAGTGGTCAAATAAAGGTCAATGGTATTCTCTTC TAAATAATAAGTTTTTAGTGTTAAACTACATTTCAATATATGTGTGATAAAACATAAAACATGTGATGAAAGAAAAGGTA AAGAGAGATCAAAGGGGAAACAAGGTGCATAGGGGAACATTCAAGGCAAGTTATGATACAGAAATGATGATACTTGTTTA AATTCCAAAATGCTAGTGATTAGTTTGTTAGAAGTACTTTAGAGGAAAAAGTTTCACAATTGTAAATAGAAAGAGGTAAC TGATGGTTCCAGAAGTCAATTACTAGAATTGCCTCAGTATTTAAAATTTTGCAGAGAATGACTGTTTTTTCATTAATATA GTGCGTGTGTGCGTGACCATGTGTCAATTGCCCATGCTTTTATTGGTTTGGTTACATGATGAAGCTCTTACTCCTGATGA GAATTTTGTTTATTTGTAAAAATGTTAAAGAAATTCTGAACTTGATTCTGTCTTTTTCATTTCCTGGATAGATGAGACTT TTTATGACATGTTTGCTCTTCATCAACTAGAGATATAGTCAAAGTAGCCCTTATAAAGGCTTTGAGTCTTTGGCAAATGA CAATCATCACCTTACAAAGCTAGCTTTTGGGCTGAGTTTGGCCTAACCCAAATTATAAGAATAAGGATTATGAATGATTA TAATTAATTTTGCAGGCATGGCATGGAAGGCAAAGACAACGAGCAACCCGAGCAGAGAAATTGAGATTCCAAGCCTTGAA GTCTGACGATCAAGAAGCTTACATGAGAATGGTGAAAGAGAGTAAGAATGAAAGATTAACTACGCTTCTTGAAGAAACAA ATAAACTACTTGTAAATTTAGGAGCAGCTGTTCAACGTCAAAAGGACAACAAACATTTAGATGGTATTGAACCCTTGGAA GAGTCCGAAGCTGATTTGCCTGAGTCAGATGCTTCAAAGAATGGGGTTTCTAAGGAATCACCTCTAGATGAAGAGATAGA TTCTGATCATAATGGTGATTCTAGAGATTTACTTGAAGGTCAGCGGCAATACAATTCTGCCATACACTCGATTCAGGAAA AAGTAAGTCTCTGCAATTCACTTCATTTCACTTCTTGGACGAAAAATGCAACGAATTTTTTCTATGAAATCTGTGGGTTT TGTTGAATTTATTCCTTATTGGTTATTAGACATTTACCATAACAGTTGATTTAGGATAATATTATATGTTTGGCTTCTAT TTGTGTAAAACACATGAGGGATTGACGGCCTTGCTCCATTGATATTTTCTATTTTCTTGTTGTTTTGCTTATATTTTAAT CTATGAGTTCTTTTGTCAAGGAAAACCAAATTAATCATTCCTTATTAGTTGTTTCTGGAATAAAAGGTTCAATACACTGG AAATATAACAATCTTAATCATTTACAGATCACTGAGCAACCGTCTATACTTCAAGGTGGGGAATTAAGACAATACCAGAT AGAGGGGCTCCAATGGATGATTTCTTTGTTTAATAACAACTTAAATGGAATTTTGGCTGATGAAATGGGACTTGGGAAGA CAATACAAACAATTTCGCTTATAGCACATCTTCTGGAATACAAGGGTGTAACTGGTCCACACTTGATTGTTGCTCCAAAG GCTGTTCTGCCAAATTGGATGAGTGAATTCTCAACATGGGTTCCTAGGTATGTCCTGGGAAGACATTGTATATTATTTCC TCTTTTGCTTCCCTTGTGGGGAGAAGGAATAGTATTCTATCTCTGAATTATGTGCATCCCATCAAATCACGTGTGCCCTT TCTTTCTGATTCAGCATTACTACTGTTCTTTACGATGGAAGGCTGGAAGAAAGGAAAGCAATGAAGGAAGAATTGTCAGG AGAGGGGAAATTTAATGTTCTTATAACACACTATGATCTTATAATGAGAGATAAAGCATTTCTCAAGAAAATTCATTGGC GCTACTTGATTGTGGATGAAGGGCACCGATTGAAGAATCATGAGTCTGCTCTAGCAAGAACCTTGGACTCTGGGTATGAT TCTACATGAGCAATATTGATGACACTTATTAATACATTTACTTCCCTAGATTCTTGGTTGTATATATTTCTATTTTATAT AGAAAAATGCTAAACAGCTTAAGTCGCATGGATGATACGACACACGACAAGAGTAACACATAAAATTAGTATAAAATCAA TAGAGAAAACAAATATTAAATCAAAAGAGAGAATCAATGTTCTAAATGTCATCATGCGTCATTTAATCATTTTAGACATA ATAAATTGCTATTATTTACTCTAATTATTGTGCTATTTCCATTTATATCAGTATACGGCTACAACACAACAAGGCTAGTG ATTTAAGTGTCCTTCCTTGCTTGCTGGCAGCTATATTTAACTAATGCAAAATAGATACGATGAAAGGAAAGAGGGATAGC TTTCAAAACCATGCATTACTTAGTTAAAGCATCCTGCAATCAAACAATTCATTACCTGACAGTGGTACTACCAGTCAGGT GGTTTAGTGCCTCTTCTCTAATTTTTGAATTTCATTTGTGTGCAGCTATCACATTCAACGAAGACTTCTTTTGACTGGTA CCCCAATTCAGAACAATTTGCAGGAATTGTGGTCCCTGCTTAATTTTCTCCTTCCTAACATTTTCAACTCAGTTCAGAAT TTCGAGGACTGGTTTAATGCTCCCTTTGCAGACCGAGTTGATGTCTCTTTAACAGATGAAGAACAGCTATTGATCATCCG GCGTCTGCATCAAGTGTGTTTCTCTCTTCTAACTTCTAATTCTCTAGCTCTTTTCAACTTCTTTCTGATGTTTTCCATTC ATTCCTTAGGTGATAAGGCCCTTCATCTTAAGAAGGAAAAAGGACGAGGTAGAAAAATGTCTTCCTGAGAAATCTCAGGT CATACTCAAATGTGATATGTCCGCCTGGCAGAAAGTATATTATCAACAAGTTACTGATGTAGGCAGAGTTGGCTTAGACA ATGGTCTGTATCTATTTTTCATTTTCCATTTATCCCTTAACCCACTTCTCCTTTCAAGTTTCAAATTCGTAAAAATTGCA AATCTCTTCCCATATACTTTGGTTTTGAATATTTGGTATGCTAAAGTTATTCATTTTTTCCCAACTCCACTGATATAGCC TGTGAATTTCATTGTATTTTCAATATGCTTATTAATCAGTTTAGCCTGTCTTTTAGGAAGTAAGCCACGAGCCTATTTTC CCTTCAGTTGTAATTATTCCTTATTAGTGTGTTTTACCTGTTGTAACTTTGTTAAGAATTGGTGACATATGTTTATTTCT TAGCTCAACATAAATGTGGGTTGCAAACTTGCAATCACCTGTTGTTGAGATCTTGTAGTTTTCTTTTATAAAAAAAAAGC ACTATTTCCCAGATTTCTCAAAACTTGCGTTGCAAGCTTATTCTGACTTATGGATCAATTTGTAGGTTCTGGAAAATCAA AAAGTCTACAGAACTTAACAATGCAACTCAGAAAGTGTTGCAACCATCCCTACCTCTTTGTGGGAGATTATGATATGTAT AAACGTAAGGAGATTGTCAGAGCATCGGGTAAGTTTGAACTTCTAGACCGTTTGCTACCAAAACTTCGCAGAGCTGGACA CAGAGTCCTCCTTTTCTCACAAATGACTCGACTCATGGACGTTCTTGAAATTTATTTGCGACTTCATGATTTCAAGTATC TTAGACTTGATGGCTCAACAAAAACAGAGGAAAGAGGCACTCTGCTAAAGAAATTCAATGCTCCTGACTCCCCATACTTT ATGTTTCTCTTGAGCACCCGTGCGGGGGGTCTTGGTTTGAACTTGCAAACAGCAGATACTGTTATAATTTTTGACAGTGA TTGGAACCCGCAAATGGATCAACAAGCAGAGGACCGAGCACATCGCATTGGACAAAAGAAGGAAGTTAGGGTTTTTGTCT TGGTTAGTGTGGGATCAATAGAAGAGGTGATTTTAGAGCGTGCAAAACAAAAGATGGGCATTGATGCCAAAGTCATTCAG GCAGGACTTTTCAACACTACTTCAACAGGTTTGTAGTCTTGATACTAGTACTATGTCCTGGCAATATTTGTTGTTATGTT TTGGCAAATGTCTGAAAGCATTTCTTTTATATGTTGAAAGAATAAGAGGAAATGGGAGGGGTAGTTTATCTATTTCCCTG CTTCAGAGCTAGCATTATGCACTGTCTTCTAATAACTCTGCATATAGGTGGTAGACCTTTATGTGCCAAAACTTCTACTA GCGCTGTAAATAAAAGTATAAAACATAGAAGTGTAATCTAGGTATTATTGATTATATTTTTATGCTTGGAACATACTCTT AATCATACAGATAAGTTCTCCATAGCATTATATTCTTTTTGTTTAAGAATTCCATCCCATTTCATATCAAGTAGAATATT TAAAATTTTAATGGGACTTTTTAAATTATTCCATGCTACCATGTCTGCTCCTTTAGTCATATTTCTAAAAAAGTTGAAGA CTATTTAAGCATGTGGTAATTTTGTTTGTGCAGCCCAGGACAGGAGAGAAATGTTAGAGGAGATTATGCGTAGAGGTTCA AGGGCGCTTGGGAATGATGTGCCCAGTGAGAGAGAAATTAACCGGCTTGCTGCTCGATCAGATGAGGAATTTTGGCTGTT TGAGAAAATGGATGAAGAGAGAAGGCAAGAGGAAAATTACAGATCTCGTCTGATGGAAGAGCATGAATTGCCAGATTGGG TGTATTCTCCACTTAATAAGGATGATAAGGCCAAAGAGTTCAACGCTAGTGTTACTGGAAAGCGGAAAAGGAAAGAAGTG GTATATGCAGACACATTGAGTGATCTACAATGGATGAAGGCTGTGGAGAATGGGGAAGACATGGCAAGGCTTTCAGGTAG AGGGAAAAGAAGAGACCGCGTCTCATCTGACAGCATTGCACAAGCCAGTGATAATGCGGTGGCGGAAGAAAGTTTACTAT ATAGAGCTGAAAGTGCTTCCATGGCAAGCGAAAGAACAAGTGAAGAAGATAGTTTCCATGTGACCCCTGCCTCAAAGAGA TTCAAGCCTGAAGGAACAAATTTCCAGAGACATGCGTACGAGGATGTCAGAGGAAGTGGTTTAAACCAGCATCTGTTATC CTGGAATACTCACAGGAAGAAGAGATCAAACTTTCCTGGGCCGGGTTCATCATCCGATTCTAGAGGGCAAAGTTCAAACG GAAAAGCAAACTGGAACTGATCTAAGTTAAAATTTAGTCATTGCTGCCAGAGTTCACACAAGTAGTTCTTGAAGCAGAAT TGGCAAGCAATTTTCTTGTATTAACAGTTTGTTCTTCAATTGTGCAACATCCACATTAATTCAGAGAAAGTATTTATTTA CAAATTTTGAATAAATATTAGATTTGCCATAAAAAACCCACATTATCATAATTTTGTCATCCTAATTATTCCTCAAAAAT GCTTTATAATTCTCATGATTATGATTGTTGTTATCAAATTAGGAAGTCTGAAGAGTACATTTTAGATGATAAA
CDS sequence (LotjaGi5g1v0316700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCGTGATAGGTGAGGAGGAAGACAAGAAGGAGCACGCCAAAACACTCATCTGCGCCCTCAATCTCCTCTCACG CGACCTCCCTCTTCCCTCTCACCTCCTCACCTCCGTCTCTTCAATCTACCACAACAACCACCACGATGATGTAGGGGATT CTGGAGAAGGTTTAATTGCAGATCTTGAAGATGCTGTGTTGAATCAGCGGCTGAGTCGTGTGTCAGGTTCCAAATTGGAG GAAGCGAGGGGAAACCGGTATCAAACTCAGATTCAAAACCGGTTGAACCAGCTTCAAGAATTGCCTTCAAGCAGGGGAGA TGACCTGCAGTCGAAGTGCCTGCTTGAATATTATGGACTAAAGCTAGCAGAGTTGCAGTCAAAGGTTCGATCTGATGTGA GTGCTGAAAACTGGCTAAATGTTAAATGTGCATATCCTGACAGGCAATTGTTTGACTGGGGCATGATGAGATTGCGCCGT CCACTGTATGGTGTTGGAGATCCATTTGCCATGGATGCTGATGATCAGTTAAAAAAGAAACGGGATGTTGAGAGACTGTC AAGATTAGAAGAGGTGGAGAAAAACCATATAGAAACTAGAAAAAGGAAATTTTTTGCAGAAGTACTTGATACTGTCCGTG ATTTCCAATTACAAATTCAAGCTTCTTTGAAGCGGAGAAAACAGAGGAATGATGGCATCCAGGCATGGCATGGAAGGCAA AGACAACGAGCAACCCGAGCAGAGAAATTGAGATTCCAAGCCTTGAAGTCTGACGATCAAGAAGCTTACATGAGAATGGT GAAAGAGAGTAAGAATGAAAGATTAACTACGCTTCTTGAAGAAACAAATAAACTACTTGTAAATTTAGGAGCAGCTGTTC AACGTCAAAAGGACAACAAACATTTAGATGGTATTGAACCCTTGGAAGAGTCCGAAGCTGATTTGCCTGAGTCAGATGCT TCAAAGAATGGGGTTTCTAAGGAATCACCTCTAGATGAAGAGATAGATTCTGATCATAATGGTGATTCTAGAGATTTACT TGAAGGTCAGCGGCAATACAATTCTGCCATACACTCGATTCAGGAAAAAATCACTGAGCAACCGTCTATACTTCAAGGTG GGGAATTAAGACAATACCAGATAGAGGGGCTCCAATGGATGATTTCTTTGTTTAATAACAACTTAAATGGAATTTTGGCT GATGAAATGGGACTTGGGAAGACAATACAAACAATTTCGCTTATAGCACATCTTCTGGAATACAAGGGTGTAACTGGTCC ACACTTGATTGTTGCTCCAAAGGCTGTTCTGCCAAATTGGATGAGTGAATTCTCAACATGGGTTCCTAGCATTACTACTG TTCTTTACGATGGAAGGCTGGAAGAAAGGAAAGCAATGAAGGAAGAATTGTCAGGAGAGGGGAAATTTAATGTTCTTATA ACACACTATGATCTTATAATGAGAGATAAAGCATTTCTCAAGAAAATTCATTGGCGCTACTTGATTGTGGATGAAGGGCA CCGATTGAAGAATCATGAGTCTGCTCTAGCAAGAACCTTGGACTCTGGCTATCACATTCAACGAAGACTTCTTTTGACTG GTACCCCAATTCAGAACAATTTGCAGGAATTGTGGTCCCTGCTTAATTTTCTCCTTCCTAACATTTTCAACTCAGTTCAG AATTTCGAGGACTGGTTTAATGCTCCCTTTGCAGACCGAGTTGATGTCTCTTTAACAGATGAAGAACAGCTATTGATCAT CCGGCGTCTGCATCAAGTGATAAGGCCCTTCATCTTAAGAAGGAAAAAGGACGAGGTAGAAAAATGTCTTCCTGAGAAAT CTCAGGTCATACTCAAATGTGATATGTCCGCCTGGCAGAAAGTATATTATCAACAAGTTACTGATGTAGGCAGAGTTGGC TTAGACAATGGTTCTGGAAAATCAAAAAGTCTACAGAACTTAACAATGCAACTCAGAAAGTGTTGCAACCATCCCTACCT CTTTGTGGGAGATTATGATATGTATAAACGTAAGGAGATTGTCAGAGCATCGGGTAAGTTTGAACTTCTAGACCGTTTGC TACCAAAACTTCGCAGAGCTGGACACAGAGTCCTCCTTTTCTCACAAATGACTCGACTCATGGACGTTCTTGAAATTTAT TTGCGACTTCATGATTTCAAGTATCTTAGACTTGATGGCTCAACAAAAACAGAGGAAAGAGGCACTCTGCTAAAGAAATT CAATGCTCCTGACTCCCCATACTTTATGTTTCTCTTGAGCACCCGTGCGGGGGGTCTTGGTTTGAACTTGCAAACAGCAG ATACTGTTATAATTTTTGACAGTGATTGGAACCCGCAAATGGATCAACAAGCAGAGGACCGAGCACATCGCATTGGACAA AAGAAGGAAGTTAGGGTTTTTGTCTTGGTTAGTGTGGGATCAATAGAAGAGGTGATTTTAGAGCGTGCAAAACAAAAGAT GGGCATTGATGCCAAAGTCATTCAGGCAGGACTTTTCAACACTACTTCAACAGCCCAGGACAGGAGAGAAATGTTAGAGG AGATTATGCGTAGAGGTTCAAGGGCGCTTGGGAATGATGTGCCCAGTGAGAGAGAAATTAACCGGCTTGCTGCTCGATCA GATGAGGAATTTTGGCTGTTTGAGAAAATGGATGAAGAGAGAAGGCAAGAGGAAAATTACAGATCTCGTCTGATGGAAGA GCATGAATTGCCAGATTGGGTGTATTCTCCACTTAATAAGGATGATAAGGCCAAAGAGTTCAACGCTAGTGTTACTGGAA AGCGGAAAAGGAAAGAAGTGGTATATGCAGACACATTGAGTGATCTACAATGGATGAAGGCTGTGGAGAATGGGGAAGAC ATGGCAAGGCTTTCAGGTAGAGGGAAAAGAAGAGACCGCGTCTCATCTGACAGCATTGCACAAGCCAGTGATAATGCGGT GGCGGAAGAAAGTTTACTATATAGAGCTGAAAGTGCTTCCATGGCAAGCGAAAGAACAAGTGAAGAAGATAGTTTCCATG TGACCCCTGCCTCAAAGAGATTCAAGCCTGAAGGAACAAATTTCCAGAGACATGCGTACGAGGATGTCAGAGGAAGTGGT TTAAACCAGCATCTGTTATCCTGGAATACTCACAGGAAGAAGAGATCAAACTTTCCTGGGCCGGGTTCATCATCCGATTC TAGAGGGCAAAGTTCAAACGGAAAAGCAAACTGGAACTGA
Protein sequence (LotjaGi5g1v0316700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATVIGEEEDKKEHAKTLICALNLLSRDLPLPSHLLTSVSSIYHNNHHDDVGDSGEGLIADLEDAVLNQRLSRVSGSKLE EARGNRYQTQIQNRLNQLQELPSSRGDDLQSKCLLEYYGLKLAELQSKVRSDVSAENWLNVKCAYPDRQLFDWGMMRLRR PLYGVGDPFAMDADDQLKKKRDVERLSRLEEVEKNHIETRKRKFFAEVLDTVRDFQLQIQASLKRRKQRNDGIQAWHGRQ RQRATRAEKLRFQALKSDDQEAYMRMVKESKNERLTTLLEETNKLLVNLGAAVQRQKDNKHLDGIEPLEESEADLPESDA SKNGVSKESPLDEEIDSDHNGDSRDLLEGQRQYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILA DEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLI THYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQ NFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVG LDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIY LRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQ KKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARS DEEFWLFEKMDEERRQEENYRSRLMEEHELPDWVYSPLNKDDKAKEFNASVTGKRKRKEVVYADTLSDLQWMKAVENGED MARLSGRGKRRDRVSSDSIAQASDNAVAEESLLYRAESASMASERTSEEDSFHVTPASKRFKPEGTNFQRHAYEDVRGSG LNQHLLSWNTHRKKRSNFPGPGSSSDSRGQSSNGKANWN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 91 | 1005 | 915 | 0.0 | – | |
| PANTHER | 91 | 1005 | 915 | 0.0 | – | |
| MobiDBLite | 309 | 346 | 38 | - | – | |
| MobiDBLite | 326 | 346 | 21 | - | – | |
| Gene3D | 345 | 600 | 256 | 2.2E-75 | ||
| SUPERFAMILY | 352 | 601 | 250 | 1.08E-63 | ||
| SMART | 372 | 565 | 194 | 1.2E-37 | ||
| CDD | 373 | 603 | 231 | 1.96546E-127 | – | |
| ProSiteProfiles | 388 | 554 | 167 | 25.36 | ||
| Pfam | 390 | 667 | 278 | 8.0E-70 | ||
| SUPERFAMILY | 603 | 854 | 252 | 1.41E-67 | ||
| Gene3D | 607 | 906 | 300 | 4.1E-101 | – | |
| CDD | 678 | 810 | 133 | 6.67685E-59 | – | |
| Pfam | 686 | 799 | 114 | 7.9E-20 | ||
| ProSiteProfiles | 689 | 856 | 168 | 17.535 | ||
| SMART | 715 | 799 | 85 | 2.0E-25 | ||
| Pfam | 879 | 952 | 74 | 5.7E-11 | ||
| Coils | 887 | 907 | 21 | - | – | |
| SMART | 892 | 952 | 61 | 1.4E-20 | ||
| MobiDBLite | 963 | 977 | 15 | - | – | |
| MobiDBLite | 963 | 982 | 20 | - | – | |
| MobiDBLite | 999 | 1026 | 28 | - | – | |
| MobiDBLite | 1002 | 1017 | 16 | - | – | |
| MobiDBLite | 1050 | 1079 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Histone binding | Interacting selectively and non-covalently with a histone, any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity. |
Expression pattern of LotjaGi5g1v0316700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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