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PF14619

Source: Pfam

Description

Snf2-ATP coupling, chromatin remodelling complex

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0042393
Molecular function Histone binding Interacting selectively and non-covalently with a histone, any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity.
Subterm of

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj1g3v0052650.1
– PREDICTED: transcription regulatory protein SNF2-like [Glycine max] gi|356541302|ref|XP_003539117.1|
Domains
20
Lj4g3v2374790.1
– Helicase swr1 [Medicago truncatula] gi|357478579|ref|XP_003609575.1|
Domains
3
Lj4g3v2374790.2
– Helicase swr1 [Medicago truncatula] gi|357478579|ref|XP_003609575.1|
Domains
3
Lj5g3v2058550.1
– PREDICTED: transcription regulatory protein SNF2-like [Glycine max] gi|356534230|ref|XP_003535660.1|
Domains
21
Lj6g3v1916160.1
– PREDICTED: chromatin structure-remodeling complex protein SYD-like isoform X2 [Cicer arietinum] gi|502151178|ref|XP_004508316.1|
Domains
19
Lj6g3v1916160.2
– PREDICTED: chromatin structure-remodeling complex protein SYD-like isoform X2 [Cicer arietinum] gi|502151178|ref|XP_004508316.1|
Domains
16
LotjaGi2g1v0457100.1
– DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|I1LFS4|I1LFS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457100
Domains
22
LotjaGi4g1v0346800.1
– Chromatin remodeling 1; TAIR: AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|F4IHS2|SYD_ARATH Chromatin structure-remodeling complex protein SYD; TrEMBL-Plants: tr|V7CA49|V7CA49_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0346800
Domains
27
LotjaGi5g1v0316700.1
– DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0S3SMF5|A0A0S3SMF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700
Domains
23
LotjaGi5g1v0316700.2
– DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|K7LLB3|K7LLB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700
Domains
23
LotjaGi5g1v0316700.3
– DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0R0I5I9|A0A0R0I5I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700
Domains
23
LotjaGi5g1v0316700.4
– DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0L9TZW8|A0A0L9TZW8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700
Domains
23
LotjaGi5g1v0316700.5
– DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|I1NGB6|I1NGB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700
Domains
23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69