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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000719
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 3339 results. Now displaying 10 of 67 with 50 rows per page. This search has taken 7.849s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1289070.4
n.a. PREDICTED: serine/threonine-protein kinase ULK3-like [Glycine max] gi|356508997|ref|XP_003523239.1| chr1 15304631 15306361 +
3 domain predictions
3 GO terms
Lj1g3v1290400.1
n.a. Protein kinase [Medicago truncatula] gi|357519861|ref|XP_003630219.1| chr1 15415291 15417944 -
4 domain predictions
3 GO terms
Lj1g3v1316910.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like [Glycine max] gi|356516360|ref|XP_003526863.1| chr1 15806880 15811880 +
4 domain predictions
3 GO terms
Lj1g3v1316910.2
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like [Glycine max] gi|356516360|ref|XP_003526863.1| chr1 15808782 15811880 +
4 domain predictions
3 GO terms
Lj1g3v1318210.1
n.a. mitogen-activated kinase kinase kinase alpha [Lotus japonicus] gi|45476486|dbj|BAD12492.1| chr1 15971154 15975694 +
4 domain predictions
3 GO terms
Lj1g3v1318220.1
n.a. mitogen-activated kinase kinase kinase alpha [Lotus japonicus] gi|45476486|dbj|BAD12492.1| chr1 15971169 15975707 +
4 domain predictions
3 GO terms
Lj1g3v1386390.1
n.a. PREDICTED: calcium-dependent protein kinase SK5-like [Cicer arietinum] gi|502137246|ref|XP_004503020.1| chr1 16894656 16899064 +
4 domain predictions
3 GO terms
Lj1g3v1465210.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356516507|ref|XP_003526935.1| chr1 17540974 17545296 -
4 domain predictions
3 GO terms
Lj1g3v1486340.1
n.a. Protein kinase [Medicago truncatula] gi|87240901|gb|ABD32759.1| chr1 17811517 17811977 +
3 domain predictions
3 GO terms
Lj1g3v1526260.1
n.a. PREDICTED: serine/threonine-protein kinase PEPKR2-like [Glycine max] gi|356510139|ref|XP_003523797.1| chr1 18261218 18266391 +
4 domain predictions
3 GO terms
Lj1g3v1548770.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356510128|ref|XP_003523792.1| chr1 18519088 18526640 +
3 domain predictions
3 GO terms
Lj1g3v1548770.2
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356510128|ref|XP_003523792.1| chr1 18519313 18526640 +
3 domain predictions
3 GO terms
Lj1g3v1561390.1
n.a. PREDICTED: serine/threonine-protein kinase-like protein At1g28390-like [Cicer arietinum] gi|502133011|ref|XP_004501618.1| chr1 18890584 18892957 -
4 domain predictions
3 GO terms
Lj1g3v1604230.1
n.a. PREDICTED: wall-associated receptor kinase-like 14-like [Cicer arietinum] gi|502131637|ref|XP_004501050.1| chr1 19241765 19245185 +
4 domain predictions
3 GO terms
Lj1g3v1663400.1
n.a. PREDICTED: serine/threonine-protein kinase TOUSLED-like [Glycine max] gi|356499255|ref|XP_003518457.1| chr1 19878574 19889817 -
4 domain predictions
3 GO terms
Lj1g3v1686670.1
n.a. Disease resistance protein [Medicago truncatula] gi|357465601|ref|XP_003603085.1| chr1 19998154 20002147 -
3 domain predictions
3 GO terms
Lj1g3v1687840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357465633|ref|XP_003603101.1| chr1 20084740 20087792 -
4 domain predictions
3 GO terms
Lj1g3v1787540.1
n.a. PREDICTED: U-box domain-containing protein 35-like isoform X2 [Cicer arietinum] gi|502132630|ref|XP_004501455.1| chr1 21159801 21165042 -
3 domain predictions
3 GO terms
Lj1g3v1787560.1
n.a. PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356507026|ref|XP_003522272.1| chr1 21172496 21183878 +
4 domain predictions
3 GO terms
Lj1g3v1788350.1
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356518179|ref|XP_003527759.1| chr1 21467368 21469840 +
2 domain predictions
3 GO terms
Lj1g3v1788350.2
n.a. Kinase-like protein [Medicago truncatula] gi|357465893|ref|XP_003603231.1| chr1 21467390 21470638 +
3 domain predictions
3 GO terms
Lj1g3v1788350.3
n.a. Kinase-like protein [Medicago truncatula] gi|357465893|ref|XP_003603231.1| chr1 21467577 21469840 +
3 domain predictions
3 GO terms
Lj1g3v1841230.1
n.a. PREDICTED: probable receptor-like protein kinase At1g80640-like [Glycine max] gi|356518228|ref|XP_003527781.1| chr1 22384652 22388097 -
3 domain predictions
3 GO terms
Lj1g3v1841230.3
n.a. PREDICTED: probable receptor-like protein kinase At1g80640-like [Glycine max] gi|356518228|ref|XP_003527781.1| chr1 22386803 22388001 -
2 domain predictions
3 GO terms
Lj1g3v1901610.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like [Glycine max] gi|356518250|ref|XP_003527792.1| chr1 22627313 22630556 +
4 domain predictions
3 GO terms
Lj1g3v1911780.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484477|ref|XP_003612526.1| chr1 22706045 22709873 +
3 domain predictions
3 GO terms
Lj1g3v1991590.1
n.a. PREDICTED: U-box domain-containing protein 34-like [Cicer arietinum] gi|502132091|ref|XP_004501223.1| chr1 23447682 23452281 +
4 domain predictions
3 GO terms
Lj1g3v1991630.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519095|ref|XP_003629836.1| chr1 23470386 23474214 -
3 domain predictions
3 GO terms
Lj1g3v2023010.1
n.a. S-locus lectin protein kinase family protein isoform 1 [Theobroma cacao] gi|508721005|gb|EOY12902.1| chr1 23742959 23745766 +
3 domain predictions
3 GO terms
Lj1g3v2033030.1
n.a. S-locus lectin protein kinase family protein isoform 2, partial [Theobroma cacao] gi|508721006|gb|EOY12903.1| chr1 23753092 23756677 +
3 domain predictions
3 GO terms
Lj1g3v2035180.1
n.a. PREDICTED: serine/threonine-protein kinase AFC3-like [Glycine max] gi|356515564|ref|XP_003526469.1| chr1 23853820 23854909 -
3 domain predictions
3 GO terms
Lj1g3v2035180.2
n.a. Serine/threonine protein kinase AFC3 [Medicago truncatula] gi|357466609|ref|XP_003603589.1| chr1 23853820 23857814 -
4 domain predictions
3 GO terms
Lj1g3v2035180.3
n.a. PREDICTED: serine/threonine-protein kinase AFC3-like [Glycine max] gi|356515564|ref|XP_003526469.1| chr1 23853820 23857767 -
4 domain predictions
3 GO terms
Lj1g3v2065420.1
n.a. PREDICTED: casein kinase I isoform delta-like [Glycine max] gi|356515601|ref|XP_003526487.1| chr1 24377875 24383177 +
4 domain predictions
3 GO terms
Lj1g3v2072070.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790-like [Glycine max] gi|356518354|ref|XP_003527844.1| chr1 24594650 24599026 -
3 domain predictions
3 GO terms
Lj1g3v2093240.1
n.a. Casein kinase I protein [Theobroma cacao] gi|508782527|gb|EOY29783.1| chr1 24659751 24667244 +
4 domain predictions
3 GO terms
Lj1g3v2093240.2
n.a. Casein kinase I protein [Theobroma cacao] gi|508782527|gb|EOY29783.1| chr1 24659751 24667244 +
4 domain predictions
3 GO terms
Lj1g3v2095470.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502131757|ref|XP_004501091.1| chr1 24754477 24763730 +
4 domain predictions
3 GO terms
Lj1g3v2095520.1
n.a. PREDICTED: serine/threonine-protein kinase Aurora-1-like isoform X1 [Cicer arietinum] gi|502131750|ref|XP_004501089.1| chr1 24775620 24780955 -
4 domain predictions
3 GO terms
Lj1g3v2096140.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356510067|ref|XP_003523762.1| chr1 25083270 25086894 -
4 domain predictions
3 GO terms
Lj1g3v2096160.1
n.a. PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max] gi|356507963|ref|XP_003522732.1| chr1 25102415 25119448 -
4 domain predictions
3 GO terms
Lj1g3v2127230.1
n.a. PREDICTED: cyclin-dependent kinase E-1-like isoform X1 [Cicer arietinum] gi|502137170|ref|XP_004502993.1| chr1 25593989 25601361 +
4 domain predictions
3 GO terms
Lj1g3v2141160.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502131353|ref|XP_004500957.1| chr1 25859190 25863184 +
4 domain predictions
3 GO terms
Lj1g3v2264920.1
n.a. PREDICTED: tyrosine-protein kinase TXK-like [Glycine max] gi|356509608|ref|XP_003523539.1| chr1 26568280 26576170 -
3 domain predictions
3 GO terms
Lj1g3v2264920.2
n.a. PREDICTED: tyrosine-protein kinase TXK-like [Glycine max] gi|356509608|ref|XP_003523539.1| chr1 26568280 26576170 -
3 domain predictions
3 GO terms
Lj1g3v2268430.1
n.a. PREDICTED: probable serine/threonine-protein kinase WNK5-like [Glycine max] gi|356496301|ref|XP_003517007.1| chr1 26716775 26722087 -
4 domain predictions
3 GO terms
Lj1g3v2268460.1
n.a. BR-signaling kinase 1 [Theobroma cacao] gi|508723317|gb|EOY15214.1| chr1 26729863 26738445 -
2 domain predictions
3 GO terms
Lj1g3v2295270.1
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X1 [Cicer arietinum] gi|502131084|ref|XP_004500869.1| chr1 26958068 26961189 -
2 domain predictions
3 GO terms
Lj1g3v2295270.2
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like isoform X1 [Cicer arietinum] gi|502131084|ref|XP_004500869.1| chr1 26958068 26961189 -
2 domain predictions
3 GO terms
Lj1g3v2295280.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like [Cicer arietinum] gi|502131081|ref|XP_004500868.1| chr1 26965209 26969321 -
4 domain predictions
3 GO terms