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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2072070 |
| Transcript ID | Lj1g3v2072070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790-like [Glycine max] gi|356518354|ref|XP_003527844.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| TMHMM | 13 | 30 | 18 | – | – | |
| PANTHER | 13 | 392 | 380 | 0 | – | |
| PANTHER | 13 | 392 | 380 | 0 | – | |
| Phobius | 14 | 24 | 11 | – | – | |
| Phobius | 25 | 31 | 7 | – | – | |
| Phobius | 32 | 642 | 611 | – | – | |
| Pfam | 33 | 71 | 39 | 1.10E-12 | ||
| Gene3D | 33 | 302 | 270 | 1.80E-70 | ||
| SUPERFAMILY | 46 | 384 | 339 | 7.82E-65 | ||
| ProSiteProfiles | 101 | 122 | 22 | 4.501 | ||
| SMART | 127 | 151 | 25 | 15 | ||
| ProSiteProfiles | 129 | 151 | 23 | 6.688 | ||
| Pfam | 130 | 148 | 19 | 0.42 | ||
| Pfam | 155 | 214 | 60 | 6.60E-08 | ||
| ProSiteProfiles | 155 | 177 | 23 | 6.033 | ||
| SMART | 177 | 201 | 25 | 110 | ||
| ProSiteProfiles | 179 | 201 | 23 | 5.633 | ||
| ProSiteProfiles | 203 | 225 | 23 | 6.095 | ||
| SMART | 225 | 249 | 25 | 310 | ||
| ProSiteProfiles | 227 | 249 | 23 | 5.394 | ||
| ProSiteProfiles | 251 | 274 | 24 | 5.81 | ||
| Pfam | 252 | 308 | 57 | 1.40E-07 | ||
| SMART | 273 | 297 | 25 | 71 | ||
| ProSiteProfiles | 275 | 297 | 23 | 4.971 | ||
| ProSiteProfiles | 299 | 321 | 23 | 5.702 | ||
| Gene3D | 303 | 476 | 174 | 2.10E-52 | ||
| SUPERFAMILY | 319 | 622 | 304 | 5.21E-57 | ||
| ProSiteProfiles | 323 | 346 | 24 | 4.593 | ||
| SMART | 345 | 369 | 25 | 25 | ||
| Pfam | 369 | 384 | 16 | 0.41 | ||
| SMART | 370 | 393 | 24 | 29 | ||
| ProSiteProfiles | 371 | 393 | 23 | 7.211 | ||
| PANTHER | 417 | 967 | 551 | 0 | – | |
| PANTHER | 417 | 967 | 551 | 0 | – | |
| SMART | 465 | 488 | 24 | 53 | ||
| ProSiteProfiles | 467 | 489 | 23 | 5.51 | ||
| Gene3D | 477 | 604 | 128 | 1.20E-38 | ||
| Pfam | 490 | 549 | 60 | 4.70E-07 | ||
| ProSiteProfiles | 490 | 512 | 23 | 6.434 | ||
| SMART | 512 | 536 | 25 | 20 | ||
| ProSiteProfiles | 514 | 536 | 23 | 6.126 | ||
| ProSiteProfiles | 538 | 561 | 24 | 6.249 | ||
| PRINTS | 539 | 552 | 14 | 9.00E-05 | – | |
| SMART | 560 | 584 | 25 | 150 | ||
| PRINTS | 560 | 573 | 14 | 9.00E-05 | – | |
| ProSiteProfiles | 562 | 584 | 23 | 4.986 | ||
| Phobius | 643 | 667 | 25 | – | – | |
| TMHMM | 645 | 667 | 23 | – | – | |
| Gene3D | 662 | 770 | 109 | 4.00E-08 | – | |
| Phobius | 668 | 980 | 313 | – | – | |
| SUPERFAMILY | 708 | 973 | 266 | 2.16E-34 | ||
| ProSiteProfiles | 708 | 970 | 263 | 17.263 | ||
| Pfam | 747 | 965 | 219 | 4.90E-19 | ||
| Gene3D | 771 | 971 | 201 | 2.10E-23 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v2072070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2072070.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.