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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000719
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 3339 results. Now displaying 13 of 67 with 50 rows per page. This search has taken 6.818s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4107090.1
n.a. PREDICTED: CDPK-related kinase 7-like [Cicer arietinum] gi|502108115|ref|XP_004493390.1| chr1 48831693 48835058 +
3 domain predictions
3 GO terms
Lj1g3v4156030.1
n.a. Receptor-like protein kinase HAIKU2 [Medicago truncatula] gi|357446137|ref|XP_003593346.1| chr1 49420677 49421054 +
2 domain predictions
3 GO terms
Lj1g3v4252300.1
n.a. PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Glycine max] gi|356572038|ref|XP_003554177.1| chr1 50206855 50211185 +
2 domain predictions
3 GO terms
Lj1g3v4263370.1
n.a. PREDICTED: calcium-dependent protein kinase 32-like isoform X1 [Cicer arietinum] gi|502108881|ref|XP_004493510.1| chr1 50262453 50266964 +
4 domain predictions
3 GO terms
Lj1g3v4275470.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1-like [Glycine max] gi|356504803|ref|XP_003521184.1| chr1 50298942 50302843 -
2 domain predictions
3 GO terms
Lj1g3v4289020.1
n.a. protein kinase [Glycine max] gi|351723505|ref|NP_001238049.1| chr1 50519104 50522517 +
2 domain predictions
3 GO terms
Lj1g3v4316400.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2-like [Cicer arietinum] gi|502109101|ref|XP_004493566.1| chr1 50713517 50719144 -
3 domain predictions
3 GO terms
Lj1g3v4372190.1
n.a. PREDICTED: probable protein kinase At2g41970-like [Glycine max] gi|356570526|ref|XP_003553436.1| chr1 51216368 51219959 +
2 domain predictions
3 GO terms
Lj1g3v4404390.1
n.a. PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Glycine max] gi|356500232|ref|XP_003518937.1| chr1 51348734 51354659 -
3 domain predictions
3 GO terms
Lj1g3v4404400.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Cicer arietinum] gi|502109379|ref|XP_004493631.1| chr1 51357960 51358769 +
4 domain predictions
3 GO terms
Lj1g3v4404420.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Glycine max] gi|356504888|ref|XP_003521226.1| chr1 51361567 51365252 +
2 domain predictions
3 GO terms
Lj1g3v4446980.1
n.a. PREDICTED: serine/threonine-protein kinase Nek4-like [Glycine max] gi|356504957|ref|XP_003521259.1| chr1 52002137 52008770 +
4 domain predictions
3 GO terms
Lj1g3v4515510.1
n.a. PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356503620|ref|XP_003520605.1| chr1 52950321 52951835 +
3 domain predictions
3 GO terms
Lj1g3v4515520.1
n.a. PREDICTED: serine/threonine-protein kinase 38-like isoform X1 [Cicer arietinum] gi|502110070|ref|XP_004493792.1| chr1 52951800 52957870 +
4 domain predictions
3 GO terms
Lj1g3v4515530.1
n.a. PREDICTED: casein kinase I isoform delta-like [Glycine max] gi|356505039|ref|XP_003521300.1| chr1 52962873 52965626 +
4 domain predictions
3 GO terms
Lj1g3v4528370.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Glycine max] gi|356570674|ref|XP_003553510.1| chr1 53294622 53298488 -
4 domain predictions
3 GO terms
Lj1g3v4528370.2
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Glycine max] gi|356570674|ref|XP_003553510.1| chr1 53294622 53298706 -
4 domain predictions
3 GO terms
Lj1g3v4528650.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356570688|ref|XP_003553517.1| chr1 53456859 53461643 +
2 domain predictions
3 GO terms
Lj1g3v4578820.1
n.a. Serine/threonine protein kinase PBS1 [Medicago truncatula] gi|357510543|ref|XP_003625560.1| chr1 54322051 54325735 -
3 domain predictions
3 GO terms
Lj1g3v4579490.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Glycine max] gi|356505222|ref|XP_003521391.1| chr1 54629164 54633146 +
3 domain predictions
3 GO terms
Lj1g3v4591000.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Glycine max] gi|356572460|ref|XP_003554386.1| chr1 54902556 54906683 +
2 domain predictions
3 GO terms
Lj1g3v4691720.1
n.a. PREDICTED: wall-associated receptor kinase-like 20-like [Glycine max] gi|356570800|ref|XP_003553572.1| chr1 55638063 55640546 -
4 domain predictions
3 GO terms
Lj1g3v4693100.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502111675|ref|XP_004494131.1| chr1 55784172 55787477 -
3 domain predictions
3 GO terms
Lj1g3v4694300.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK5-like [Glycine max] gi|356509567|ref|XP_003523519.1| chr1 55827302 55829899 +
3 domain predictions
3 GO terms
Lj1g3v4695530.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356570819|ref|XP_003553581.1| chr1 55949435 55960753 +
3 domain predictions
3 GO terms
Lj1g3v4730400.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502112140|ref|XP_004494248.1| chr1 56652576 56656895 -
4 domain predictions
3 GO terms
Lj1g3v4752970.1
n.a. PREDICTED: calcium-dependent protein kinase 2-like [Glycine max] gi|356503866|ref|XP_003520722.1| chr1 56901933 56904900 +
4 domain predictions
3 GO terms
Lj1g3v4794000.1
n.a. PREDICTED: glycogen synthase kinase-3 homolog MsK-1-like isoform X4 [Cicer arietinum] gi|502116888|ref|XP_004495628.1| chr1 57795748 57800093 +
4 domain predictions
3 GO terms
Lj1g3v4804250.1
n.a. PREDICTED: probable receptor-like protein kinase At5g18500-like [Glycine max] gi|356505741|ref|XP_003521648.1| chr1 57869465 57873584 -
4 domain predictions
3 GO terms
Lj1g3v4806310.1
n.a. PREDICTED: serine/threonine-protein kinase haspin-like [Cicer arietinum] gi|502113021|ref|XP_004494517.1| chr1 57894098 57900141 +
2 domain predictions
3 GO terms
Lj1g3v4830460.1
n.a. serine/threonine protein kinase [Glycine max] gi|351725893|ref|NP_001237620.1| chr1 58422977 58426175 -
3 domain predictions
3 GO terms
Lj1g3v4831690.1
n.a. PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356576521|ref|XP_003556379.1| chr1 58463377 58475977 -
4 domain predictions
3 GO terms
Lj1g3v4831730.1
n.a. PREDICTED: glycogen synthase kinase-3 homolog MsK-3-like [Cicer arietinum] gi|502112826|ref|XP_004494455.1| chr1 58487759 58490021 +
4 domain predictions
3 GO terms
Lj1g3v4831730.2
n.a. RecName: Full=Glycogen synthase kinase-3 homolog MsK-3] gi|11182434|sp|P51139.2|MSK3_MEDSA chr1 58487759 58491618 +
4 domain predictions
3 GO terms
Lj1g3v4849450.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Cicer arietinum] gi|502112746|ref|XP_004494430.1| chr1 58709231 58714134 +
3 domain predictions
3 GO terms
Lj1g3v4849450.2
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Cicer arietinum] gi|502112746|ref|XP_004494430.1| chr1 58712828 58714134 +
3 domain predictions
3 GO terms
Lj1g3v4913220.1
n.a. PREDICTED: wee1-like protein kinase-like [Cicer arietinum] gi|502112512|ref|XP_004494355.1| chr1 59458768 59462459 +
4 domain predictions
3 GO terms
Lj1g3v4931570.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Cicer arietinum] gi|502113329|ref|XP_004494615.1| chr1 60012095 60017338 +
4 domain predictions
3 GO terms
Lj1g3v4955170.1
n.a. PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Glycine max] gi|356574920|ref|XP_003555591.1| chr1 60215276 60226258 +
4 domain predictions
3 GO terms
Lj1g3v4955170.2
n.a. PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cicer arietinum] gi|502117253|ref|XP_004495756.1| chr1 60222360 60226258 +
4 domain predictions
3 GO terms
Lj1g3v4955340.1
n.a. PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like [Fragaria vesca subsp]. vesca] gi|470122218|ref|XP_004297142.1| chr1 60297288 60301102 -
3 domain predictions
3 GO terms
Lj1g3v4955340.4
n.a. PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like [Fragaria vesca subsp]. vesca] gi|470122218|ref|XP_004297142.1| chr1 60297554 60304815 -
3 domain predictions
3 GO terms
Lj1g3v4955420.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356505916|ref|XP_003521735.1| chr1 60344790 60349542 -
4 domain predictions
3 GO terms
Lj1g3v4957780.1
n.a. PREDICTED: serine/threonine-protein kinase WNK1-like [Glycine max] gi|356535149|ref|XP_003536111.1| chr1 60493234 60495971 -
4 domain predictions
3 GO terms
Lj1g3v4996200.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Cicer arietinum] gi|502113633|ref|XP_004494710.1| chr1 60679629 60682812 -
3 domain predictions
3 GO terms
Lj1g3v5010640.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max] gi|356546735|ref|XP_003541778.1| chr1 60901967 60904367 +
4 domain predictions
3 GO terms
Lj1g3v5021110.1
n.a. Protein kinase-like protein [Medicago truncatula] gi|357512441|ref|XP_003626509.1| chr1 61228559 61231987 -
4 domain predictions
3 GO terms
Lj1g3v5060350.1
n.a. PREDICTED: CDPK-related kinase 3-like [Cicer arietinum] gi|502114076|ref|XP_004494853.1| chr1 61753811 61782884 -
3 domain predictions
3 GO terms
Lj1g3v5061090.1
n.a. PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max] gi|356504209|ref|XP_003520891.1| chr1 62032093 62033579 +
4 domain predictions
3 GO terms
Lj1g3v5061290.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6-like [Cicer arietinum] gi|502114195|ref|XP_004494892.1| chr1 62069830 62077683 +
2 domain predictions
3 GO terms