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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4252300 |
| Transcript ID | Lj1g3v4252300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Glycine max] gi|356572038|ref|XP_003554177.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 881 | 881 | 0 | – | |
| PANTHER | 1 | 881 | 881 | 0 | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| SignalP | 1 | 19 | 19 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 533 | 514 | – | – | |
| Gene3D | 35 | 290 | 256 | 1.50E-64 | ||
| SUPERFAMILY | 44 | 283 | 240 | 1.67E-51 | ||
| SMART | 86 | 109 | 24 | 67 | ||
| Pfam | 88 | 147 | 60 | 2.50E-11 | ||
| PRINTS | 89 | 102 | 14 | 9.10E-05 | – | |
| SMART | 110 | 134 | 25 | 16 | ||
| PRINTS | 110 | 123 | 14 | 9.10E-05 | – | |
| SMART | 158 | 182 | 25 | 140 | ||
| SUPERFAMILY | 193 | 514 | 322 | 1.81E-58 | ||
| SMART | 206 | 230 | 25 | 130 | ||
| Gene3D | 291 | 506 | 216 | 9.90E-49 | ||
| SMART | 326 | 350 | 25 | 4.3 | ||
| Pfam | 327 | 387 | 61 | 1.30E-07 | ||
| SMART | 447 | 470 | 24 | 120 | ||
| TMHMM | 534 | 556 | 23 | – | – | |
| Phobius | 534 | 558 | 25 | – | – | |
| Phobius | 559 | 887 | 329 | – | – | |
| Gene3D | 603 | 679 | 77 | 3.80E-09 | – | |
| ProSiteProfiles | 606 | 887 | 282 | 26.11 | ||
| SUPERFAMILY | 606 | 884 | 279 | 4.02E-50 | ||
| Pfam | 609 | 881 | 273 | 3.90E-27 | ||
| Gene3D | 684 | 885 | 202 | 9.90E-31 | – | |
| ProSitePatterns | 729 | 741 | 13 | – | ||
| Coils | 877 | 887 | 11 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v4252300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4252300.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.