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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001245
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 1129 results. Now displaying 9 of 23 with 50 rows per page. This search has taken 7.846s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2618570.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase RFK1-like [Cicer arietinum] gi|502140572|ref|XP_004504262.1| chr4 35648943 35657660 +
2 domain predictions
2 GO terms
Lj4g3v2951110.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043611 +
2 domain predictions
2 GO terms
Lj4g3v2951110.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043611 +
2 domain predictions
2 GO terms
Lj4g3v2951110.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like isoform X1 [Cicer arietinum] gi|502139432|ref|XP_004503764.1| chr4 39039562 39043051 +
2 domain predictions
2 GO terms
Lj4g3v2951240.1
n.a. Protein kinase-like protein [Medicago truncatula] gi|357520451|ref|XP_003630514.1| chr4 39110666 39115819 +
2 domain predictions
2 GO terms
Lj4g3v3014610.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356523838|ref|XP_003530541.1| chr4 40168281 40172425 -
3 domain predictions
2 GO terms
Lj4g3v3014740.1
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356513239|ref|XP_003525321.1| chr4 40237018 40241324 +
2 domain predictions
2 GO terms
Lj4g3v3014740.2
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356513239|ref|XP_003525321.1| chr4 40237018 40241324 +
2 domain predictions
2 GO terms
Lj4g3v3015010.1
n.a. PREDICTED: U-box domain-containing protein 35-like [Glycine max] gi|356511423|ref|XP_003524426.1| chr4 40293110 40295134 +
2 domain predictions
2 GO terms
Lj4g3v3099600.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356527839|ref|XP_003532514.1| chr4 41332895 41335930 +
2 domain predictions
2 GO terms
Lj4g3v3114660.1
n.a. Protein kinase [Medicago truncatula] gi|92870993|gb|ABE80154.1| chr4 42051853 42063848 +
3 domain predictions
2 GO terms
Lj5g3v0066680.2
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase A-like isoform X2 [Cicer arietinum] gi|502132972|ref|XP_004501601.1| chr5 272915 278907 -
2 domain predictions
2 GO terms
Lj5g3v0104760.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cicer arietinum] gi|502126040|ref|XP_004499157.1| chr5 838894 843879 -
2 domain predictions
2 GO terms
Lj5g3v0104760.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cicer arietinum] gi|502126040|ref|XP_004499157.1| chr5 838894 843879 -
2 domain predictions
2 GO terms
Lj5g3v0104760.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cicer arietinum] gi|502126040|ref|XP_004499157.1| chr5 839866 843879 -
2 domain predictions
2 GO terms
Lj5g3v0401650.1
n.a. PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356554074|ref|XP_003545374.1| chr5 3722642 3729307 -
3 domain predictions
2 GO terms
Lj5g3v0469100.1
n.a. PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356552460|ref|XP_003544585.1| chr5 4547104 4549961 +
2 domain predictions
2 GO terms
Lj5g3v0527650.1
n.a. PREDICTED: probable receptor-like protein kinase At1g80640-like [Glycine max] gi|356563914|ref|XP_003550202.1| chr5 5692736 5696980 -
2 domain predictions
2 GO terms
Lj5g3v0529420.1
n.a. G protein-coupled receptor kinase [Medicago truncatula] gi|357437003|ref|XP_003588777.1| chr5 6092847 6101703 -
2 domain predictions
2 GO terms
Lj5g3v0616170.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Glycine max] gi|356570730|ref|XP_003553538.1| chr5 8107467 8112815 +
2 domain predictions
2 GO terms
Lj5g3v0657180.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Glycine max] gi|356572460|ref|XP_003554386.1| chr5 9062856 9066999 -
2 domain predictions
2 GO terms
Lj5g3v1097040.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357513353|ref|XP_003626965.1| chr5 17624083 17633629 +
2 domain predictions
2 GO terms
Lj5g3v1129640.1
n.a. n.a. chr5 18128302 18130948 -
2 domain predictions
2 GO terms
Lj5g3v1208370.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356535310|ref|XP_003536190.1| chr5 19759251 19762670 -
2 domain predictions
2 GO terms
Lj5g3v1303330.1
n.a. Protein kinase-like protein [Medicago truncatula] gi|357441241|ref|XP_003590898.1| chr5 20321465 20326189 +
2 domain predictions
2 GO terms
Lj5g3v1401610.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356533641|ref|XP_003535370.1| chr5 20851374 20851844 -
2 domain predictions
2 GO terms
Lj5g3v1426480.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like [Cicer arietinum] gi|502117300|ref|XP_004495773.1| chr5 21184147 21191923 +
3 domain predictions
2 GO terms
Lj5g3v1452140.1
n.a. PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cicer arietinum] gi|502117253|ref|XP_004495756.1| chr5 21417470 21418477 -
2 domain predictions
2 GO terms
Lj5g3v1463430.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like [Cicer arietinum] gi|502117220|ref|XP_004495744.1| chr5 21563183 21566740 +
2 domain predictions
2 GO terms
Lj5g3v1548740.1
n.a. Pto kinase interactor [Medicago truncatula] gi|357442087|ref|XP_003591321.1| chr5 22650743 22659607 -
2 domain predictions
2 GO terms
Lj5g3v1605520.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356526520|ref|XP_003531865.1| chr5 23431032 23432250 +
2 domain predictions
2 GO terms
Lj5g3v1696950.1
n.a. Mitogen-activated protein kinase kinase kinase 13-A [Medicago truncatula] gi|357442709|ref|XP_003591632.1| chr5 24128534 24139008 -
3 domain predictions
2 GO terms
Lj5g3v1696950.2
n.a. Mitogen-activated protein kinase kinase kinase 13-A [Medicago truncatula] gi|357442709|ref|XP_003591632.1| chr5 24128534 24132144 -
3 domain predictions
2 GO terms
Lj5g3v1749340.3
n.a. PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform 1 [Glycine max] gi|356558614|ref|XP_003547599.1| chr5 25053929 25060627 -
2 domain predictions
2 GO terms
Lj5g3v1774980.1
n.a. n.a. chr5 25294508 25299189 +
2 domain predictions
2 GO terms
Lj5g3v1811460.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357443189|ref|XP_003591872.1| chr5 25881451 25883228 +
2 domain predictions
2 GO terms
Lj5g3v1872930.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Glycine max] gi|356574579|ref|XP_003555423.1| chr5 26761563 26764454 -
2 domain predictions
2 GO terms
Lj5g3v1927340.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Cicer arietinum] gi|502118928|ref|XP_004496444.1| chr5 27301083 27302384 -
2 domain predictions
2 GO terms
Lj5g3v1953010.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like, partial [Cicer arietinum] gi|502120055|ref|XP_004496832.1| chr5 27593260 27593904 +
2 domain predictions
2 GO terms
Lj5g3v1955080.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356534057|ref|XP_003535574.1| chr5 27620416 27632064 +
3 domain predictions
2 GO terms
Lj5g3v1955080.2
n.a. PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356534057|ref|XP_003535574.1| chr5 27620416 27632064 +
3 domain predictions
2 GO terms
Lj5g3v1988700.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like [Glycine max] gi|356575998|ref|XP_003556122.1| chr5 27936713 27940009 -
2 domain predictions
2 GO terms
Lj5g3v1988710.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like [Glycine max] gi|356575998|ref|XP_003556122.1| chr5 27936899 27940009 -
2 domain predictions
2 GO terms
Lj5g3v1999120.1
n.a. PREDICTED: U-box domain-containing protein 32-like [Glycine max] gi|356534121|ref|XP_003535606.1| chr5 28104224 28112427 -
2 domain predictions
2 GO terms
Lj5g3v1999120.2
n.a. PREDICTED: U-box domain-containing protein 32-like [Cicer arietinum] gi|502119238|ref|XP_004496550.1| chr5 28104224 28112427 -
2 domain predictions
2 GO terms
Lj5g3v1999120.3
n.a. PREDICTED: U-box domain-containing protein 32-like [Cicer arietinum] gi|502119238|ref|XP_004496550.1| chr5 28104645 28112427 -
2 domain predictions
2 GO terms
Lj5g3v2030870.1
n.a. Mitogen-activated protein kinase [Medicago truncatula] gi|357444219|ref|XP_003592387.1| chr5 28850701 28853309 -
2 domain predictions
2 GO terms
Lj5g3v2045590.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Cicer arietinum] gi|502119660|ref|XP_004496695.1| chr5 29226938 29228941 +
3 domain predictions
2 GO terms
Lj5g3v2060950.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347887|ref|XP_003637982.1| chr5 29834125 29838154 +
2 domain predictions
2 GO terms
Lj5g3v2060950.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502119921|ref|XP_004496784.1| chr5 29834125 29838154 +
2 domain predictions
2 GO terms