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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2060950 |
| Transcript ID | Lj5g3v2060950.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347887|ref|XP_003637982.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 29 | 29 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 29 | 11 | – | – | |
| Phobius | 30 | 286 | 257 | – | – | |
| ProSiteProfiles | 35 | 141 | 107 | 18.888 | ||
| Pfam | 41 | 138 | 98 | 1.50E-18 | ||
| ProSiteProfiles | 147 | 254 | 108 | 19.521 | ||
| Pfam | 164 | 251 | 88 | 2.20E-10 | ||
| Coils | 174 | 194 | 21 | – | – | |
| PANTHER | 199 | 561 | 363 | 5.90E-196 | – | |
| MobiDBLite | 258 | 281 | 24 | – | – | |
| Gene3D | 265 | 366 | 102 | 7.90E-13 | ||
| Phobius | 287 | 308 | 22 | – | – | |
| TMHMM | 289 | 311 | 23 | – | – | |
| Phobius | 309 | 568 | 260 | – | – | |
| SUPERFAMILY | 333 | 553 | 221 | 1.48E-74 | ||
| SMART | 353 | 568 | 216 | 2.70E-25 | ||
| ProSiteProfiles | 353 | 568 | 216 | 39.538 | ||
| Pfam | 355 | 552 | 198 | 9.20E-49 | ||
| ProSitePatterns | 359 | 381 | 23 | – | ||
| CDD | 359 | 562 | 204 | 1.06E-88 | – | |
| Gene3D | 367 | 417 | 51 | 1.60E-28 | – | |
| Gene3D | 418 | 553 | 136 | 2.30E-42 | – | |
| ProSitePatterns | 474 | 486 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v2060950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2060950.1, powered by CORGI.
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