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Lj5g3v2060950.2

Overview

Field Value
Gene ID Lj5g3v2060950
Transcript ID Lj5g3v2060950.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502119921|ref|XP_004496784.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 29 29
SignalP 1 29 29
SignalP 1 23 23
SignalP 1 29 29
Phobius 1 6 6
Phobius 7 18 12
Phobius 19 29 11
Phobius 30 521 492
ProSiteProfiles 35 141 107 18.888
Pfam 41 138 98 1.30E-18
ProSiteProfiles 147 254 108 19.521
Pfam 164 251 88 1.90E-10
Coils 174 194 21
PANTHER 199 263 65 1.50E-183
MobiDBLite 258 284 27
PANTHER 280 514 235 1.50E-183
SUPERFAMILY 282 506 225 8.23E-75
Gene3D 293 319 27 3.00E-06
ProSiteProfiles 306 521 216 39.538
SMART 306 521 216 2.70E-25
Pfam 308 505 198 7.70E-49
ProSitePatterns 312 334 23
CDD 312 515 204 2.28E-89
Gene3D 320 370 51 1.40E-28
Gene3D 371 506 136 2.00E-42
ProSitePatterns 427 439 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj5g3v2060950.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v2060950.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.