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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013210
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 576 results. Now displaying 2 of 12 with 50 rows per page. This search has taken 5.595s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0281699.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cicer arietinum] gi|502165279|ref|XP_004513505.1| chr0 146062372 146066727 +
2 domain predictions
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Lj0g3v0282649.1
n.a. n.a. chr0 146542871 146545973 -
2 domain predictions
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Lj0g3v0291629.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356573811|ref|XP_003555049.1| chr0 151322489 151325256 -
2 domain predictions
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Lj0g3v0301569.1
n.a. Leucine-rich repeat, plant specific [Medicago truncatula] gi|124360975|gb|ABN08947.1| chr0 156793098 156793337 +
2 domain predictions
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Lj0g3v0303549.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357516993|ref|XP_003628785.1| chr0 158016672 158020224 -
2 domain predictions
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Lj0g3v0306119.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max] gi|356568066|ref|XP_003552234.1| chr0 159629854 159630617 -
2 domain predictions
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Lj0g3v0308309.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356551470|ref|XP_003544098.1| chr0 160978563 160981283 -
2 domain predictions
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Lj0g3v0311769.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356503054|ref|XP_003520327.1| chr0 162769296 162770907 +
2 domain predictions
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Lj0g3v0321329.1
n.a. PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max] gi|356551263|ref|XP_003543996.1| chr0 167769164 167770124 +
2 domain predictions
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Lj0g3v0327439.1
n.a. disease resistance protein/LRR protein-related protein precursor [Glycine max] gi|351724553|ref|NP_001235526.1| chr0 171171664 171174112 -
2 domain predictions
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Lj0g3v0328559.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum] gi|502122925|ref|XP_004497940.1| chr0 171728076 171731884 -
2 domain predictions
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Lj0g3v0330669.1
n.a. somatic embryogenesis receptor kinase-like protein 3 [Medicago truncatula] gi|308154500|gb|ADO15297.1| chr0 172824652 172830231 +
2 domain predictions
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Lj0g3v0331039.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|358344142|ref|XP_003636151.1| chr0 172997688 172998801 -
2 domain predictions
 –
Lj0g3v0331049.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 173005144 173009117 -
2 domain predictions
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Lj0g3v0332709.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 174114063 174116111 -
2 domain predictions
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Lj0g3v0333829.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502096406|ref|XP_004490727.1| chr0 174724986 174726946 +
2 domain predictions
 –
Lj0g3v0336229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| chr0 176102747 176107250 -
2 domain predictions
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Lj0g3v0343819.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Glycine max] gi|356536856|ref|XP_003536949.1| chr0 180296303 180299178 +
2 domain predictions
 –
Lj0g3v0346099.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Fragaria vesca subsp]. vesca] gi|470101852|ref|XP_004287382.1| chr0 181531041 181534267 +
2 domain predictions
 –
Lj0g3v0351279.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502155784|ref|XP_004510191.1| chr0 184699959 184703503 +
2 domain predictions
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Lj0g3v0356809.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max] gi|356495063|ref|XP_003516400.1| chr0 187910217 187913635 -
2 domain predictions
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Lj0g3v0359279.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561446|ref|XP_003548992.1| chr0 189146158 189148127 -
2 domain predictions
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Lj0g3v0361919.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714835 190719641 +
2 domain predictions
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Lj1g3v0050980.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 2-like [Cicer arietinum] gi|502158862|ref|XP_004511305.1| chr1 290354 292244 +
2 domain predictions
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Lj1g3v0809660.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like isoform 1 [Glycine max] gi|356501661|ref|XP_003519642.1| chr1 10607004 10612204 +
2 domain predictions
 –
Lj1g3v0934380.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356507598|ref|XP_003522551.1| chr1 11730957 11733726 +
2 domain predictions
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Lj1g3v1060470.1
n.a. Kinase-like protein [Medicago truncatula] gi|357464125|ref|XP_003602344.1| chr1 13106600 13110033 +
2 domain predictions
 –
Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
2 domain predictions
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Lj1g3v1147540.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220498 +
2 domain predictions
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Lj1g3v1147550.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220810 +
2 domain predictions
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Lj1g3v1207870.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X1 [Cicer arietinum] gi|502136840|ref|XP_004502857.1| chr1 14753957 14759281 -
2 domain predictions
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Lj1g3v1222370.1
n.a. PREDICTED: brassinosteroid LRR receptor kinase-like [Cicer arietinum] gi|502136882|ref|XP_004502878.1| chr1 14923173 14927479 -
2 domain predictions
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Lj1g3v1222380.1
n.a. Brassinosteroid receptor [Medicago truncatula] gi|357464445|ref|XP_003602504.1| chr1 14923489 14927479 -
2 domain predictions
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Lj1g3v1911780.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484477|ref|XP_003612526.1| chr1 22706045 22709873 +
2 domain predictions
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Lj1g3v1991630.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357519095|ref|XP_003629836.1| chr1 23470386 23474214 -
2 domain predictions
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Lj1g3v2072070.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790-like [Glycine max] gi|356518354|ref|XP_003527844.1| chr1 24594650 24599026 -
2 domain predictions
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Lj1g3v2095470.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum] gi|502131757|ref|XP_004501091.1| chr1 24754477 24763730 +
2 domain predictions
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Lj1g3v2096160.1
n.a. PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max] gi|356507963|ref|XP_003522732.1| chr1 25102415 25119448 -
2 domain predictions
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Lj1g3v2141160.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum] gi|502131353|ref|XP_004500957.1| chr1 25859190 25863184 +
2 domain predictions
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Lj1g3v2312930.1
n.a. n.a. chr1 27184595 27206641 -
2 domain predictions
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Lj1g3v2312950.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356523290|ref|XP_003530273.1| chr1 27196031 27207565 +
2 domain predictions
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Lj1g3v2372340.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356566696|ref|XP_003551566.1| chr1 27833962 27838612 +
2 domain predictions
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Lj1g3v2377960.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356521068|ref|XP_003529180.1| chr1 28075457 28079707 +
2 domain predictions
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Lj1g3v2377960.2
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357506189|ref|XP_003623383.1| chr1 28075457 28082926 +
2 domain predictions
 –
Lj1g3v2482450.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356530171|ref|XP_003533657.1| chr1 28788792 28793022 -
2 domain predictions
 –
Lj1g3v2536060.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356566806|ref|XP_003551618.1| chr1 29149727 29155785 -
2 domain predictions
 –
Lj1g3v2536140.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like [Glycine max] gi|356566812|ref|XP_003551621.1| chr1 29207517 29211706 +
2 domain predictions
 –
Lj1g3v2809340.1
n.a. leucine-rich repeat receptor-like protein [Lotus japonicus] gi|336088213|dbj|BAK39955.1| chr1 31969424 31972700 +
2 domain predictions
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Lj1g3v2883920.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502106207|ref|XP_004492888.1| chr1 32542899 32545980 -
2 domain predictions
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Lj1g3v2893970.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502106207|ref|XP_004492888.1| chr1 32569038 32571235 -
2 domain predictions
 –