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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2372340 |
| Transcript ID | Lj1g3v2372340.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356566696|ref|XP_003551566.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| PANTHER | 10 | 196 | 187 | 0 | – | |
| PANTHER | 10 | 196 | 187 | 0 | – | |
| Phobius | 11 | 23 | 13 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 24 | 32 | 9 | – | – | |
| Phobius | 33 | 1006 | 974 | – | – | |
| Gene3D | 37 | 168 | 132 | 1.50E-19 | ||
| Pfam | 37 | 76 | 40 | 2.70E-05 | ||
| SUPERFAMILY | 68 | 196 | 129 | 1.24E-13 | ||
| SMART | 106 | 129 | 24 | 42 | ||
| ProSiteProfiles | 108 | 129 | 22 | 4.816 | ||
| Gene3D | 179 | 397 | 219 | 5.30E-45 | ||
| SUPERFAMILY | 183 | 518 | 336 | 2.55E-52 | ||
| PANTHER | 224 | 296 | 73 | 0 | – | |
| PANTHER | 224 | 296 | 73 | 0 | – | |
| SMART | 237 | 260 | 24 | 120 | ||
| ProSiteProfiles | 239 | 262 | 24 | 5.009 | ||
| SMART | 261 | 285 | 25 | 76 | ||
| SMART | 333 | 357 | 25 | 31 | ||
| PANTHER | 340 | 381 | 42 | 0 | – | |
| PANTHER | 340 | 381 | 42 | 0 | – | |
| ProSiteProfiles | 359 | 381 | 23 | 5.332 | ||
| ProSiteProfiles | 382 | 404 | 23 | 5.972 | ||
| Gene3D | 402 | 610 | 209 | 8.00E-40 | ||
| SMART | 405 | 429 | 25 | 55 | ||
| ProSiteProfiles | 407 | 429 | 23 | 4.87 | ||
| SMART | 455 | 478 | 24 | 83 | ||
| ProSiteProfiles | 456 | 478 | 23 | 7.235 | ||
| PRINTS | 457 | 470 | 14 | 3.10E-05 | – | |
| Pfam | 457 | 516 | 60 | 1.10E-08 | ||
| PANTHER | 457 | 1055 | 599 | 0 | – | |
| PANTHER | 457 | 1055 | 599 | 0 | – | |
| ProSiteProfiles | 480 | 501 | 22 | 4.632 | ||
| SUPERFAMILY | 498 | 642 | 145 | 1.09E-21 | ||
| PRINTS | 503 | 516 | 14 | 3.10E-05 | – | |
| SMART | 503 | 524 | 22 | 120 | ||
| ProSiteProfiles | 505 | 526 | 22 | 7.003 | ||
| Pfam | 554 | 614 | 61 | 6.30E-07 | ||
| ProSiteProfiles | 555 | 577 | 23 | 6.257 | ||
| SMART | 577 | 599 | 23 | 26 | ||
| ProSiteProfiles | 579 | 600 | 22 | 7.519 | ||
| ProSiteProfiles | 603 | 615 | 13 | 4.847 | ||
| Gene3D | 611 | 830 | 220 | 2.60E-45 | ||
| SUPERFAMILY | 623 | 810 | 188 | 2.72E-50 | ||
| SMART | 623 | 646 | 24 | 67 | ||
| Pfam | 623 | 636 | 14 | 0.16 | ||
| ProSiteProfiles | 624 | 645 | 22 | 6.38 | ||
| SMART | 647 | 671 | 25 | 96 | ||
| ProSiteProfiles | 649 | 671 | 23 | 5.101 | ||
| ProSiteProfiles | 697 | 719 | 23 | 5.048 | ||
| ProSiteProfiles | 721 | 743 | 23 | 5.787 | ||
| ProSiteProfiles | 745 | 765 | 21 | 4.955 | ||
| Gene3D | 869 | 979 | 111 | 4.60E-27 | ||
| SUPERFAMILY | 872 | 969 | 98 | 2.72E-50 | ||
| SMART | 890 | 914 | 25 | 16 | ||
| ProSiteProfiles | 892 | 914 | 23 | 6.118 | ||
| Pfam | 892 | 951 | 60 | 2.00E-07 | ||
| ProSiteProfiles | 916 | 939 | 24 | 5.34 | ||
| SMART | 938 | 961 | 24 | 140 | ||
| ProSiteProfiles | 940 | 962 | 23 | 5.987 | ||
| Phobius | 1007 | 1027 | 21 | – | – | |
| Phobius | 1028 | 1135 | 108 | – | – | |
| MobiDBLite | 1056 | 1087 | 32 | – | – | |
| Coils | 1058 | 1078 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2372340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2372340.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.