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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1147550 |
| Transcript ID | Lj1g3v1147550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| PANTHER | 11 | 497 | 487 | 5.50E-244 | – | |
| PANTHER | 11 | 497 | 487 | 5.50E-244 | – | |
| Phobius | 21 | 25 | 5 | – | – | |
| Phobius | 26 | 497 | 472 | – | – | |
| Pfam | 34 | 75 | 42 | 1.00E-08 | ||
| Gene3D | 35 | 260 | 226 | 1.20E-57 | ||
| SUPERFAMILY | 59 | 379 | 321 | 2.95E-58 | ||
| ProSiteProfiles | 104 | 126 | 23 | 5.671 | ||
| SMART | 126 | 150 | 25 | 0.69 | ||
| Pfam | 128 | 146 | 19 | 0.088 | ||
| ProSiteProfiles | 128 | 150 | 23 | 7.65 | ||
| PRINTS | 129 | 142 | 14 | 6.30E-06 | – | |
| Pfam | 153 | 212 | 60 | 1.40E-07 | ||
| SMART | 199 | 222 | 24 | 120 | ||
| ProSiteProfiles | 201 | 223 | 23 | 5.587 | ||
| SMART | 223 | 247 | 25 | 41 | ||
| ProSiteProfiles | 225 | 247 | 23 | 5.51 | ||
| Pfam | 225 | 247 | 23 | 1.4 | ||
| Gene3D | 261 | 377 | 117 | 5.60E-27 | ||
| SMART | 295 | 319 | 25 | 46 | ||
| ProSiteProfiles | 297 | 319 | 23 | 5.471 | ||
| Pfam | 297 | 355 | 59 | 1.90E-08 | ||
| ProSiteProfiles | 321 | 343 | 23 | 4.955 | ||
| Gene3D | 378 | 497 | 120 | 2.10E-29 | ||
| SMART | 395 | 418 | 24 | 340 | ||
| SUPERFAMILY | 396 | 497 | 102 | 3.00E-24 | ||
| ProSiteProfiles | 397 | 423 | 27 | 5.794 | ||
| Pfam | 397 | 456 | 60 | 1.40E-08 | ||
| SMART | 419 | 443 | 25 | 28 | ||
| PRINTS | 419 | 432 | 14 | 6.30E-06 | – | |
| Pfam | 469 | 491 | 23 | 0.53 | ||
| ProSiteProfiles | 469 | 491 | 23 | 5.017 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1147550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1147550.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.