Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013320
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 826 results. Now displaying 7 of 17 with 50 rows per page. This search has taken 6.383s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0561190.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356561798|ref|XP_003549165.1| chr2 7495060 7498988 +
2 domain predictions
 –
Lj2g3v0663780.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max] gi|356555135|ref|XP_003545892.1| chr2 10782437 10784008 -
2 domain predictions
 –
Lj2g3v0716020.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X2 [Cicer arietinum] gi|502163637|ref|XP_004512900.1| chr2 11350591 11354059 +
2 domain predictions
 –
Lj2g3v0824780.1
n.a. PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 26-like [Glycine max] gi|356496414|ref|XP_003517063.1| chr2 12949879 12952002 +
3 domain predictions
 –
Lj2g3v0824790.1
n.a. xyloglucan endotransglycosylase [Lotus japonicus] gi|51534948|dbj|BAD36901.1| chr2 12950033 12951705 +
3 domain predictions
 –
Lj2g3v0914400.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK-like [Glycine max] gi|356511425|ref|XP_003524427.1| chr2 14206377 14209827 -
2 domain predictions
 –
Lj2g3v1034490.1
n.a. serine/threonine protein kinase-like protein [Glycine max] gi|351720793|ref|NP_001237700.1| chr2 16500834 16504786 +
2 domain predictions
 –
Lj2g3v1102960.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356574206|ref|XP_003555242.1| chr2 17757003 17758033 +
2 domain predictions
 –
Lj2g3v1102970.1
n.a. n.a. chr2 17760528 17766202 -
2 domain predictions
 –
Lj2g3v1193010.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK10-like [Glycine max] gi|356502698|ref|XP_003520154.1| chr2 18866558 18871961 -
2 domain predictions
 –
Lj2g3v1196640.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 1-like [Glycine max] gi|356498122|ref|XP_003517902.1| chr2 19044050 19047890 +
2 domain predictions
 –
Lj2g3v1226730.1
n.a. PREDICTED: receptor-like protein kinase FERONIA-like [Glycine max] gi|356502649|ref|XP_003520130.1| chr2 19521589 19524841 +
2 domain predictions
 –
Lj2g3v1226740.1
n.a. PREDICTED: receptor-like protein kinase FERONIA-like [Glycine max] gi|356502649|ref|XP_003520130.1| chr2 19522075 19525318 +
2 domain predictions
 –
Lj2g3v1226750.1
n.a. n.a. chr2 19525691 19530089 -
2 domain predictions
 –
Lj2g3v1277780.2
n.a. PREDICTED: beta-1,3-galactosyltransferase 15-like [Cicer arietinum] gi|502093839|ref|XP_004490069.1| chr2 20451850 20457339 -
3 domain predictions
 –
Lj2g3v1277870.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356567976|ref|XP_003552190.1| chr2 20493641 20496426 +
3 domain predictions
 –
Lj2g3v1337460.1
n.a. PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like [Glycine max] gi|356500447|ref|XP_003519043.1| chr2 20925004 20927782 +
2 domain predictions
 –
Lj2g3v1337660.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] gi|356497862|ref|XP_003517775.1| chr2 20993244 20999161 +
2 domain predictions
 –
Lj2g3v1337660.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] gi|356497862|ref|XP_003517775.1| chr2 20993244 20996207 +
2 domain predictions
 –
Lj2g3v1337660.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] gi|356497862|ref|XP_003517775.1| chr2 20993244 20999336 +
2 domain predictions
 –
Lj2g3v1338960.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502155065|ref|XP_004509947.1| chr2 21073645 21076949 -
2 domain predictions
 –
Lj2g3v1349500.1
n.a. PREDICTED: probable beta-1,3-galactosyltransferase 19-like [Cicer arietinum] gi|502093476|ref|XP_004489955.1| chr2 21282187 21288132 -
3 domain predictions
 –
Lj2g3v1378730.1
n.a. Protein kinase family protein [Medicago truncatula] gi|357486023|ref|XP_003613299.1| chr2 21719049 21725318 -
2 domain predictions
 –
Lj2g3v1389480.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357505343|ref|XP_003622960.1| chr2 21999637 22003243 -
2 domain predictions
 –
Lj2g3v1414850.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK13-like [Glycine max] gi|356502022|ref|XP_003519821.1| chr2 22168018 22172400 +
2 domain predictions
 –
Lj2g3v1415230.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 2-like [Glycine max] gi|356497745|ref|XP_003517719.1| chr2 22351595 22361571 -
2 domain predictions
 –
Lj2g3v1415230.2
n.a. protein kinase family protein [Glycine max] gi|351720648|ref|NP_001235136.1| chr2 22355028 22357386 -
2 domain predictions
 –
Lj2g3v1415240.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356502033|ref|XP_003519826.1| chr2 22362443 22365172 -
2 domain predictions
 –
Lj2g3v1415410.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490594|dbj|BAI79284.1| chr2 22444408 22449627 -
2 domain predictions
 –
Lj2g3v1455160.1
n.a. PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1-like [Glycine max] gi|356496981|ref|XP_003517343.1| chr2 22974495 22981006 -
2 domain predictions
 –
Lj2g3v1467770.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502154472|ref|XP_004509711.1| chr2 23165539 23166345 -
3 domain predictions
 –
Lj2g3v1467800.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502154472|ref|XP_004509711.1| chr2 23171094 23171894 -
3 domain predictions
 –
Lj2g3v1499260.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr2 23729150 23732999 -
2 domain predictions
 –
Lj2g3v1499280.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357438749|ref|XP_003589651.1| chr2 23733643 23736008 +
2 domain predictions
 –
Lj2g3v1499300.2
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr2 23737954 23739737 -
2 domain predictions
 –
Lj2g3v1499330.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502123870|ref|XP_004498292.1| chr2 23741065 23742765 +
2 domain predictions
 –
Lj2g3v1510600.1
n.a. PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 30-like [Cicer arietinum] gi|502162333|ref|XP_004512469.1| chr2 23896971 23900198 -
3 domain predictions
 –
Lj2g3v1550090.1
n.a. serine/threonine-protein kinase At5g01020-like [Glycine max] gi|358248006|ref|NP_001240045.1| chr2 24532460 24535902 +
2 domain predictions
 –
Lj2g3v1550210.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24617165 24620297 +
2 domain predictions
 –
Lj2g3v1550220.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24631322 +
2 domain predictions
 –
Lj2g3v1550220.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24623507 24627465 +
2 domain predictions
 –
Lj2g3v1550250.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr2 24633936 24636365 -
2 domain predictions
 –
Lj2g3v1550260.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
2 domain predictions
 –
Lj2g3v1550260.2
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr2 24647829 24651585 +
2 domain predictions
 –
Lj2g3v1550290.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| chr2 24661913 24665974 -
2 domain predictions
 –
Lj2g3v1550300.1
n.a. n.a. chr2 24661913 24665646 +
2 domain predictions
 –
Lj2g3v1550330.1
n.a. n.a. chr2 24672572 24677456 +
2 domain predictions
 –
Lj2g3v1550360.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
2 domain predictions
 –
Lj2g3v1550370.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| chr2 24680573 24684084 -
2 domain predictions
 –
Lj2g3v1560690.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Glycine max] gi|356546810|ref|XP_003541815.1| chr2 24827633 24829220 +
2 domain predictions
 –