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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1550290 |
| Transcript ID | Lj2g3v1550290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502161948|ref|XP_004512338.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 326 | 326 | 0 | – | |
| Phobius | 1 | 35 | 35 | – | – | |
| PANTHER | 1 | 326 | 326 | 0 | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| TMHMM | 6 | 28 | 23 | – | – | |
| Phobius | 16 | 27 | 12 | – | – | |
| Phobius | 28 | 35 | 8 | – | – | |
| Phobius | 36 | 658 | 623 | – | – | |
| Gene3D | 41 | 337 | 297 | 1.60E-67 | ||
| SUPERFAMILY | 41 | 336 | 296 | 5.21E-56 | ||
| Pfam | 42 | 80 | 39 | 8.60E-11 | ||
| SMART | 107 | 130 | 24 | 270 | ||
| SMART | 131 | 155 | 25 | 39 | ||
| SMART | 203 | 227 | 25 | 110 | ||
| PANTHER | 368 | 899 | 532 | 0 | – | |
| PANTHER | 368 | 899 | 532 | 0 | – | |
| Gene3D | 380 | 634 | 255 | 4.50E-73 | ||
| SUPERFAMILY | 380 | 634 | 255 | 2.38E-62 | ||
| SMART | 402 | 425 | 24 | 15 | ||
| Pfam | 404 | 463 | 60 | 4.20E-07 | ||
| SMART | 450 | 474 | 25 | 200 | ||
| SMART | 475 | 498 | 24 | 180 | ||
| Pfam | 549 | 608 | 60 | 1.90E-07 | ||
| SMART | 571 | 594 | 24 | 200 | ||
| Gene3D | 648 | 727 | 80 | 2.00E-10 | ||
| TMHMM | 659 | 681 | 23 | – | – | |
| Phobius | 659 | 682 | 24 | – | – | |
| Phobius | 683 | 991 | 309 | – | – | |
| SUPERFAMILY | 686 | 905 | 220 | 5.80E-53 | ||
| SMART | 714 | 983 | 270 | 2.10E-12 | ||
| ProSiteProfiles | 714 | 991 | 278 | 27.891 | ||
| Pfam | 719 | 901 | 183 | 7.70E-32 | ||
| ProSitePatterns | 720 | 743 | 24 | – | ||
| Gene3D | 728 | 781 | 54 | 4.60E-19 | – | |
| Gene3D | 782 | 904 | 123 | 2.40E-22 | – | |
| ProSitePatterns | 845 | 857 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1550290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1550290.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.