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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0561190 |
| Transcript ID | Lj2g3v0561190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356561798|ref|XP_003549165.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 9 | 275 | 267 | 0 | – | |
| PANTHER | 9 | 275 | 267 | 0 | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| Phobius | 23 | 26 | 4 | – | – | |
| Phobius | 27 | 638 | 612 | – | – | |
| SUPERFAMILY | 36 | 295 | 260 | 1.29E-51 | ||
| Pfam | 37 | 75 | 39 | 2.00E-06 | ||
| Gene3D | 37 | 278 | 242 | 7.20E-58 | ||
| Pfam | 151 | 208 | 58 | 4.20E-07 | ||
| SMART | 197 | 222 | 26 | 65 | ||
| SMART | 223 | 247 | 25 | 320 | ||
| SMART | 271 | 295 | 25 | 120 | ||
| Gene3D | 279 | 468 | 190 | 1.70E-28 | ||
| SUPERFAMILY | 296 | 600 | 305 | 3.53E-50 | – | |
| PANTHER | 305 | 981 | 677 | 0 | – | |
| PANTHER | 305 | 981 | 677 | 0 | – | |
| SMART | 318 | 341 | 24 | 16 | ||
| Gene3D | 469 | 600 | 132 | 1.30E-35 | ||
| SMART | 508 | 532 | 25 | 48 | ||
| SMART | 533 | 556 | 24 | 350 | ||
| SMART | 577 | 600 | 24 | 63 | ||
| Pfam | 579 | 600 | 22 | 1.6 | ||
| Gene3D | 627 | 704 | 78 | 3.10E-04 | ||
| Phobius | 639 | 664 | 26 | – | – | |
| TMHMM | 642 | 664 | 23 | – | – | |
| Phobius | 665 | 1018 | 354 | – | – | |
| SUPERFAMILY | 691 | 981 | 291 | 2.83E-71 | ||
| SMART | 697 | 989 | 293 | 3.90E-27 | ||
| ProSiteProfiles | 697 | 989 | 293 | 36.739 | ||
| Pfam | 699 | 979 | 281 | 1.80E-48 | ||
| ProSitePatterns | 703 | 726 | 24 | – | ||
| CDD | 703 | 981 | 279 | 7.95E-87 | – | |
| Gene3D | 705 | 763 | 59 | 8.40E-18 | – | |
| Gene3D | 764 | 979 | 216 | 7.10E-44 | – | |
| ProSitePatterns | 833 | 845 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v0561190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0561190.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.