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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1550260 |
| Transcript ID | Lj2g3v1550260.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| PANTHER | 1 | 311 | 311 | 0 | – | |
| PANTHER | 1 | 311 | 311 | 0 | – | |
| Phobius | 2 | 12 | 11 | – | – | |
| Phobius | 13 | 20 | 8 | – | – | |
| Phobius | 21 | 643 | 623 | – | – | |
| Gene3D | 26 | 324 | 299 | 1.50E-64 | ||
| Pfam | 26 | 65 | 40 | 3.80E-12 | ||
| SUPERFAMILY | 27 | 321 | 295 | 3.74E-55 | ||
| SMART | 116 | 140 | 25 | 82 | ||
| ProSiteProfiles | 118 | 140 | 23 | 4.501 | ||
| ProSiteProfiles | 142 | 164 | 23 | 5.178 | ||
| SMART | 188 | 212 | 25 | 300 | ||
| ProSiteProfiles | 287 | 309 | 23 | 5.879 | ||
| PANTHER | 353 | 997 | 645 | 0 | – | |
| PANTHER | 353 | 997 | 645 | 0 | – | |
| SUPERFAMILY | 364 | 619 | 256 | 1.05E-62 | ||
| Gene3D | 364 | 619 | 256 | 1.60E-71 | ||
| ProSiteProfiles | 365 | 388 | 24 | 5.402 | ||
| Pfam | 389 | 448 | 60 | 1.80E-08 | ||
| SMART | 435 | 459 | 25 | 31 | ||
| ProSiteProfiles | 437 | 459 | 23 | 5.633 | ||
| ProSiteProfiles | 461 | 482 | 22 | 7.581 | ||
| SMART | 483 | 508 | 26 | 66 | ||
| ProSiteProfiles | 485 | 508 | 24 | 5.402 | ||
| ProSiteProfiles | 510 | 532 | 23 | 4.971 | ||
| Pfam | 534 | 593 | 60 | 4.30E-07 | ||
| ProSiteProfiles | 534 | 557 | 24 | 5.856 | ||
| SMART | 556 | 579 | 24 | 26 | ||
| ProSiteProfiles | 558 | 580 | 23 | 6.164 | ||
| Gene3D | 635 | 704 | 70 | 6.10E-10 | ||
| TMHMM | 644 | 666 | 23 | – | – | |
| Phobius | 644 | 666 | 23 | – | – | |
| Phobius | 667 | 1012 | 346 | – | – | |
| SUPERFAMILY | 672 | 997 | 326 | 4.92E-68 | ||
| ProSiteProfiles | 699 | 1005 | 307 | 35.99 | ||
| SMART | 699 | 1005 | 307 | 7.30E-30 | ||
| Pfam | 702 | 927 | 226 | 4.80E-40 | ||
| ProSitePatterns | 705 | 728 | 24 | – | ||
| Gene3D | 705 | 787 | 83 | 4.60E-20 | – | |
| Gene3D | 788 | 1001 | 214 | 3.80E-36 | – | |
| ProSitePatterns | 830 | 842 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1550260.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1550260.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.