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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032675
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 2134 results. Now displaying 6 of 43 with 50 rows per page. This search has taken 6.230s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0276029.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X1 [Cicer arietinum] gi|502164205|ref|XP_004513081.1| chr0 143146225 143151476 -
3 domain predictions
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Lj0g3v0276849.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr0 143699929 143702518 -
3 domain predictions
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Lj0g3v0277499.1
n.a. F-box family-3 [Medicago truncatula] gi|357474037|ref|XP_003607303.1| chr0 144032608 144033105 -
2 domain predictions
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Lj0g3v0278349.1
n.a. probable leucine-rich repeat receptor-like protein kinase At1g35710-like precursor [Glycine max] gi|359807163|ref|NP_001241099.1| chr0 144542642 144544812 -
3 domain predictions
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Lj0g3v0281509.2
n.a. disease resistance protein [Glycine max] gi|351720930|ref|NP_001235657.1| chr0 145932835 145936508 +
3 domain predictions
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Lj0g3v0281699.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cicer arietinum] gi|502165279|ref|XP_004513505.1| chr0 146062372 146066727 +
3 domain predictions
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Lj0g3v0282469.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr0 146440998 146447078 +
3 domain predictions
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Lj0g3v0282649.1
n.a. n.a. chr0 146542871 146545973 -
2 domain predictions
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Lj0g3v0282659.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 146545606 146547150 +
3 domain predictions
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Lj0g3v0283139.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine max] gi|356566321|ref|XP_003551381.1| chr0 146755601 146758750 +
2 domain predictions
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Lj0g3v0283669.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357474709|ref|XP_003607639.1| chr0 147043934 147045620 +
2 domain predictions
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Lj0g3v0283809.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1| chr0 147176581 147182959 -
3 domain predictions
 –
Lj0g3v0283809.3
n.a. NBS resistance protein [Medicago truncatula] gi|357513713|ref|XP_003627145.1| chr0 147176581 147181145 -
3 domain predictions
 –
Lj0g3v0284579.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1| chr0 147661718 147663469 -
3 domain predictions
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Lj0g3v0286449.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880-like [Glycine max] gi|356556621|ref|XP_003546622.1| chr0 148819423 148823480 -
3 domain predictions
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Lj0g3v0286519.1
n.a. PREDICTED: F-box/LRR-repeat protein 13-like isoform X1 [Cicer arietinum] gi|502146833|ref|XP_004506628.1| chr0 148857662 148859607 +
2 domain predictions
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Lj0g3v0286559.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357469545|ref|XP_003605057.1| chr0 148873521 148877879 +
3 domain predictions
 –
Lj0g3v0287829.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 149578876 149580648 -
2 domain predictions
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Lj0g3v0287839.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 149581625 149585863 -
2 domain predictions
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Lj0g3v0287859.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 149591628 149596350 -
2 domain predictions
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Lj0g3v0287859.2
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 149591628 149596350 -
2 domain predictions
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Lj0g3v0288609.1
n.a. PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1 [Cicer arietinum] gi|502090322|ref|XP_004489191.1| chr0 149932992 149936282 -
3 domain predictions
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Lj0g3v0291029.3
n.a. Receptor like protein 33 [Theobroma cacao] gi|508725116|gb|EOY17013.1| chr0 151083660 151090180 +
3 domain predictions
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Lj0g3v0291039.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cicer arietinum] gi|502078346|ref|XP_004485915.1| chr0 151090772 151094021 +
3 domain predictions
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Lj0g3v0291629.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max] gi|356573811|ref|XP_003555049.1| chr0 151322489 151325256 -
3 domain predictions
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Lj0g3v0291889.1
n.a. F-box protein [Medicago truncatula] gi|357492277|ref|XP_003616427.1| chr0 151433481 151436013 -
2 domain predictions
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Lj0g3v0293469.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356566707|ref|XP_003551571.1| chr0 152328916 152329875 -
3 domain predictions
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Lj0g3v0293479.1
n.a. F-box protein [Medicago truncatula] gi|357492277|ref|XP_003616427.1| chr0 152340997 152342106 +
2 domain predictions
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Lj0g3v0296549.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 154065103 154066921 +
2 domain predictions
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Lj0g3v0296569.1
n.a. F-box family protein [Medicago truncatula] gi|357471471|ref|XP_003606020.1| chr0 154071873 154073186 +
2 domain predictions
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Lj0g3v0296659.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 154114009 154118296 -
3 domain predictions
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Lj0g3v0297189.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 154416084 154419775 +
3 domain predictions
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Lj0g3v0297389.2
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 154572869 154582454 -
3 domain predictions
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Lj0g3v0297949.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357512425|ref|XP_003626501.1| chr0 154903146 154905127 -
2 domain predictions
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Lj0g3v0300779.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 156330609 156333193 -
2 domain predictions
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Lj0g3v0301359.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356546510|ref|XP_003541669.1| chr0 156606580 156607755 +
2 domain predictions
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Lj0g3v0301569.1
n.a. Leucine-rich repeat, plant specific [Medicago truncatula] gi|124360975|gb|ABN08947.1| chr0 156793098 156793337 +
2 domain predictions
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Lj0g3v0302519.1
n.a. Disease resistance protein [Medicago truncatula] gi|357437847|ref|XP_003589199.1| chr0 157387357 157388705 -
3 domain predictions
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Lj0g3v0303549.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357516993|ref|XP_003628785.1| chr0 158016672 158020224 -
3 domain predictions
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Lj0g3v0304789.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356561456|ref|XP_003548997.1| chr0 158780159 158781199 +
3 domain predictions
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Lj0g3v0304799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356561584|ref|XP_003549061.1| chr0 158781480 158783322 +
3 domain predictions
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Lj0g3v0306049.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356499338|ref|XP_003518498.1| chr0 159614024 159621107 -
3 domain predictions
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Lj0g3v0306109.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr0 159627112 159629719 -
3 domain predictions
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Lj0g3v0306119.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max] gi|356568066|ref|XP_003552234.1| chr0 159629854 159630617 -
3 domain predictions
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Lj0g3v0308309.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356551470|ref|XP_003544098.1| chr0 160978563 160981283 -
3 domain predictions
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Lj0g3v0308459.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Cicer arietinum] gi|502165747|ref|XP_004513677.1| chr0 161062734 161064162 -
2 domain predictions
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Lj0g3v0310419.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356524195|ref|XP_003530717.1| chr0 162100284 162101333 -
2 domain predictions
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Lj0g3v0310499.1
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr0 162172119 162177717 +
2 domain predictions
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Lj0g3v0310539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356510976|ref|XP_003524208.1| chr0 162205293 162208324 -
3 domain predictions
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Lj0g3v0311769.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356503054|ref|XP_003520327.1| chr0 162769296 162770907 +
3 domain predictions
 –