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Lj0g3v0282659.1

Overview

Field Value
Gene ID Lj0g3v0282659
Transcript ID Lj0g3v0282659.1
Lotus japonicus genome version MG20 v3.0
Description Receptor protein kinase-like protein [Medicago truncatula] gi|357508031|ref|XP_003624304.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27000:SF194
1 415 415 6.00E-262 –
Phobius
NON_CYTOPLASMIC_DOMAIN
1 75 75 – –
PANTHER
PTHR27000
1 415 415 6.00E-262 –
SUPERFAMILY
SSF52058
2 43 42 8.08E-05
IPR032675
Gene3D
G3DSA:3.80.10.10
2 42 41 2.80E-07
IPR032675
Gene3D
G3DSA:2.60.120.200
68 148 81 8.90E-08
IPR013320
Phobius
TRANSMEMBRANE
76 102 27 – –
TMHMM
TMhelix
79 101 23 – –
Phobius
CYTOPLASMIC_DOMAIN
103 435 333 – –
SUPERFAMILY
SSF56112
126 413 288 3.14E-70
IPR011009
ProSiteProfiles
PS50011
143 417 275 35.679
IPR000719
Pfam
PF00069
145 413 269 5.20E-44
IPR000719
Gene3D
G3DSA:3.30.200.20
149 232 84 3.80E-21 –
Gene3D
G3DSA:1.10.510.10
233 414 182 7.90E-42 –
ProSitePatterns
PS00109
269 281 13 –
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj0g3v0282659.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0282659.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.