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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013057
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We have found 242 results. Now displaying 4 of 5 with 50 rows per page. This search has taken 7.079s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0619300.3
n.a. Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|I1N7L1|I1N7L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619300 LjG1.1_chr1 116630947 116633490 +
2 domain predictions
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LotjaGi1g1v0619400.1
n.a. Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|H6BBU3|H6BBU3_LOTJA LHT-type plant amino acid transporter 1.2; Found in the gene: LotjaGi1g1v0619400 LjG1.1_chr1 116636370 116641817 +
2 domain predictions
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LotjaGi1g1v0619400.2
n.a. Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|H6BBU3|H6BBU3_LOTJA LHT-type plant amino acid transporter 1.2; Found in the gene: LotjaGi1g1v0619400 LjG1.1_chr1 116636505 116641847 +
2 domain predictions
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LotjaGi1g1v0619400.3
n.a. Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|H6BBU3|H6BBU3_LOTJA LHT-type plant amino acid transporter 1.2; Found in the gene: LotjaGi1g1v0619400 LjG1.1_chr1 116636649 116641560 +
2 domain predictions
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LotjaGi1g1v0644900_LC.1
n.a. Amino acid permease; TAIR: AT1G58360.1 amino acid permease 1; Swiss-Prot: sp|Q42400|AAP1_ARATH Amino acid permease 1; TrEMBL-Plants: tr|A0A072V646|A0A072V646_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi1g1v0644900_LC LjG1.1_chr1 120218953 120219735 -
2 domain predictions
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LotjaGi1g1v0664000.1
n.a. Amino acid transporter family protein; TAIR: AT2G41190.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|G7KQT0|G7KQT0_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi1g1v0664000 LjG1.1_chr1 122570671 122576365 -
2 domain predictions
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LotjaGi1g1v0742000.1
n.a. Amino acid transporter, putative; TAIR: AT3G11900.1 aromatic and neutral transporter 1; Swiss-Prot: sp|Q9SF09|ANT1_ARATH Amino acid transporter ANT1; TrEMBL-Plants: tr|V7CY14|V7CY14_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0742000 LjG1.1_chr1 131585171 131590325 +
2 domain predictions
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LotjaGi1g1v0742000.2
n.a. Amino acid transporter, putative; TAIR: AT3G11900.1 aromatic and neutral transporter 1; Swiss-Prot: sp|Q9SF09|ANT1_ARATH Amino acid transporter ANT1; TrEMBL-Plants: tr|V7CY14|V7CY14_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0742000 LjG1.1_chr1 131588239 131590183 +
2 domain predictions
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LotjaGi2g1v0057600.1
n.a. Amino acid transporter, putative; TAIR: AT5G16740.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|P47082|AVT1_YEAST Vacuolar amino acid transporter 1; TrEMBL-Plants: tr|I1K3P2|I1K3P2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0057600 LjG1.1_chr2 11853170 11856977 +
2 domain predictions
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LotjaGi2g1v0157000.1
n.a. Amino acid transporter, putative; TAIR: AT1G08230.2 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|I3T876|I3T876_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0157000 LjG1.1_chr2 55623357 55632787 +
2 domain predictions
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LotjaGi2g1v0157000.2
n.a. Amino acid transporter, putative; TAIR: AT1G08230.2 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|I3T876|I3T876_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0157000 LjG1.1_chr2 55628669 55632369 +
2 domain predictions
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LotjaGi2g1v0272200.1
n.a. Amino acid transporter, putative; TAIR: AT3G30390.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9DCP2|S38A3_MOUSE Sodium-coupled neutral amino acid transporter 3; TrEMBL-Plants: tr|K7MWE5|K7MWE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0272200 LjG1.1_chr2 74319416 74324112 +
2 domain predictions
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LotjaGi2g1v0272200.2
n.a. Amino acid transporter, putative; TAIR: AT3G30390.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9DCP2|S38A3_MOUSE Sodium-coupled neutral amino acid transporter 3; TrEMBL-Plants: tr|K7MWE5|K7MWE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0272200 LjG1.1_chr2 74319993 74323244 +
2 domain predictions
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LotjaGi2g1v0279900.1
n.a. Lysine histidine transporter; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|G7JYD9|G7JYD9_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi2g1v0279900 LjG1.1_chr2 75143833 75146285 -
2 domain predictions
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LotjaGi2g1v0279900.2
n.a. Amino acid transporter, putative; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|G7JYD9|G7JYD9_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi2g1v0279900 LjG1.1_chr2 75143833 75146959 -
2 domain predictions
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LotjaGi2g1v0279900.3
n.a. Lysine histidine transporter; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|G7JYD9|G7JYD9_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi2g1v0279900 LjG1.1_chr2 75143833 75147113 -
2 domain predictions
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LotjaGi2g1v0279900.4
n.a. Amino acid transporter, putative; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|G7JYD9|G7JYD9_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi2g1v0279900 LjG1.1_chr2 75143833 75147113 -
2 domain predictions
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LotjaGi2g1v0279900.5
n.a. Amino acid transporter, putative; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|G7JYD9|G7JYD9_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi2g1v0279900 LjG1.1_chr2 75143833 75147113 -
2 domain predictions
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LotjaGi2g1v0279900.6
n.a. Histidine amino acid transporter; TAIR: AT1G25530.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C6M2|LHTL6_ARATH Lysine histidine transporter-like 6; TrEMBL-Plants: tr|V7C7J8|V7C7J8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0279900 LjG1.1_chr2 75146082 75147113 -
2 domain predictions
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LotjaGi2g1v0354200.1
n.a. Amino acid transporter, putative; TAIR: AT4G38250.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9SVG0|ANTL2_ARATH Amino acid transporter ANTL2; TrEMBL-Plants: tr|A0A0L9URX8|A0A0L9URX8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0354200 LjG1.1_chr2 83056009 83058380 +
2 domain predictions
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LotjaGi2g1v0357700.1
n.a. Lysine/histidine transporter; TAIR: AT1G47670.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8; TrEMBL-Plants: tr|G7JYU3|G7JYU3_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi2g1v0357700 LjG1.1_chr2 83386448 83390423 +
2 domain predictions
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LotjaGi3g1v0006700.1
n.a. Amino acid transporter, putative; TAIR: AT1G80510.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q28HE5|S38A6_XENTR Probable sodium-coupled neutral amino acid transporter 6; TrEMBL-Plants: tr|G7IIA0|G7IIA0_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi3g1v0006700 LjG1.1_chr3 816837 819320 -
2 domain predictions
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LotjaGi3g1v0210500.1
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L884|LAX4_MEDTR Auxin transporter-like protein 4; TrEMBL-Plants: tr|I1JLI6|I1JLI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0210500 LjG1.1_chr3 31360690 31367421 -
2 domain predictions
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LotjaGi3g1v0210500.2
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L884|LAX4_MEDTR Auxin transporter-like protein 4; TrEMBL-Plants: tr|I1JLI6|I1JLI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0210500 LjG1.1_chr3 31360883 31367424 -
2 domain predictions
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LotjaGi3g1v0210500.3
n.a. Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L884|LAX4_MEDTR Auxin transporter-like protein 4; TrEMBL-Plants: tr|I1JLI6|I1JLI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0210500 LjG1.1_chr3 31361138 31366398 -
2 domain predictions
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LotjaGi3g1v0335700.1
n.a. Amino acid transporter, putative; TAIR: AT1G71680.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9C9J0|LHTL5_ARATH Lysine histidine transporter-like 5; TrEMBL-Plants: tr|G7J063|G7J063_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi3g1v0335700 LjG1.1_chr3 70568723 70571663 +
2 domain predictions
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LotjaGi3g1v0437300_LC.1
n.a. Amino acid transporter, putative; TAIR: AT3G11900.1 aromatic and neutral transporter 1; Swiss-Prot: sp|Q9SF09|ANT1_ARATH Amino acid transporter ANT1; TrEMBL-Plants: tr|A0A0B2SRN6|A0A0B2SRN6_GLYSO DAZ-associated protein 1; Found in the gene: LotjaGi3g1v0437300_LC LjG1.1_chr3 84927103 84930694 +
2 domain predictions
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LotjaGi3g1v0437300_LC.3
n.a. Amino acid transporter, putative; TAIR: AT3G11900.1 aromatic and neutral transporter 1; Swiss-Prot: sp|Q9SF09|ANT1_ARATH Amino acid transporter ANT1; TrEMBL-Plants: tr|A0A0B2SRN6|A0A0B2SRN6_GLYSO DAZ-associated protein 1; Found in the gene: LotjaGi3g1v0437300_LC LjG1.1_chr3 84927121 84930565 +
2 domain predictions
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LotjaGi3g1v0481200.1
n.a. Amino acid transporter, putative; TAIR: AT1G08230.2 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A1J7H6M0|A0A1J7H6M0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481200 LjG1.1_chr3 89879993 89882274 +
2 domain predictions
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LotjaGi3g1v0481200.2
n.a. Amino acid transporter, putative; TAIR: AT1G08230.4 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A1J7H6M0|A0A1J7H6M0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481200 LjG1.1_chr3 89881575 89882274 +
2 domain predictions
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LotjaGi3g1v0481200.3
n.a. Amino acid transporter, putative; TAIR: AT1G08230.2 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A1J7H6M0|A0A1J7H6M0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481200 LjG1.1_chr3 89883475 89890256 +
2 domain predictions
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LotjaGi3g1v0481200.4
n.a. Amino acid transporter, putative; TAIR: AT1G08230.4 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4HW02|GAT1_ARATH GABA transporter 1; TrEMBL-Plants: tr|A0A1J7H6M0|A0A1J7H6M0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481200 LjG1.1_chr3 89889560 89890256 +
2 domain predictions
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LotjaGi3g1v0521600.1
n.a. Amino acid permease; TAIR: AT5G09220.1 amino acid permease 2; Swiss-Prot: sp|Q38967|AAP2_ARATH Amino acid permease 2; TrEMBL-Plants: tr|A0A151TMS3|A0A151TMS3_CAJCA Amino acid permease 2; Found in the gene: LotjaGi3g1v0521600 LjG1.1_chr3 93833161 93839981 +
2 domain predictions
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LotjaGi3g1v0521600.2
n.a. Amino acid permease; TAIR: AT5G09220.1 amino acid permease 2; Swiss-Prot: sp|Q38967|AAP2_ARATH Amino acid permease 2; TrEMBL-Plants: tr|I1LJ16|I1LJ16_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0521600 LjG1.1_chr3 93833949 93836830 +
2 domain predictions
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LotjaGi3g1v0521600.3
n.a. Amino acid permease; TAIR: AT5G09220.1 amino acid permease 2; Swiss-Prot: sp|Q38967|AAP2_ARATH Amino acid permease 2; TrEMBL-Plants: tr|I1LJ16|I1LJ16_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0521600 LjG1.1_chr3 93834209 93836830 +
2 domain predictions
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LotjaGi3g1v0522600.1
n.a. Auxin influx transporter; TAIR: AT2G21050.1 like AUXIN RESISTANT 2; Swiss-Prot: sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5; TrEMBL-Plants: tr|A0A072UL82|A0A072UL82_MEDTR Auxin influx transporter; Found in the gene: LotjaGi3g1v0522600 LjG1.1_chr3 93957407 93962370 +
2 domain predictions
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LotjaGi3g1v0522600.2
n.a. Auxin influx transporter; TAIR: AT2G21050.1 like AUXIN RESISTANT 2; Swiss-Prot: sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5; TrEMBL-Plants: tr|A0A0S3SDZ7|A0A0S3SDZ7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0522600 LjG1.1_chr3 93957598 93962434 +
2 domain predictions
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LotjaGi3g1v0522600.3
n.a. Auxin influx transporter; TAIR: AT2G21050.1 like AUXIN RESISTANT 2; Swiss-Prot: sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5; TrEMBL-Plants: tr|A0A151TMS0|A0A151TMS0_CAJCA Auxin transporter-like protein 5; Found in the gene: LotjaGi3g1v0522600 LjG1.1_chr3 93957899 93961164 +
2 domain predictions
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LotjaGi3g1v0522600.4
n.a. Auxin influx transporter; TAIR: AT2G21050.1 like AUXIN RESISTANT 2; Swiss-Prot: sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5; TrEMBL-Plants: tr|A0A072UL82|A0A072UL82_MEDTR Auxin influx transporter; Found in the gene: LotjaGi3g1v0522600 LjG1.1_chr3 93957918 93962103 +
2 domain predictions
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LotjaGi3g1v0533400.1
n.a. Lysine/histidine transporter; TAIR: AT1G47670.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8; TrEMBL-Plants: tr|A0A072UMJ7|A0A072UMJ7_MEDTR Transmembrane amino acid transporter family protein; Found in the gene: LotjaGi3g1v0533400 LjG1.1_chr3 95005669 95012788 -
2 domain predictions
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LotjaGi3g1v0533400.2
n.a. Lysine/histidine transporter; TAIR: AT1G47670.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9SX98|LHTL8_ARATH Lysine histidine transporter-like 8; TrEMBL-Plants: tr|V7AE95|V7AE95_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0533400 LjG1.1_chr3 95006834 95012939 -
2 domain predictions
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LotjaGi4g1v0063600.1
n.a. Amino acid transporter, putative; TAIR: AT5G16740.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q7Z2H8|S36A1_HUMAN Proton-coupled amino acid transporter 1; TrEMBL-Plants: tr|I1K3P2|I1K3P2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0063600 LjG1.1_chr4 7954656 7956414 +
2 domain predictions
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LotjaGi4g1v0122800.1
n.a. Amino acid transporter family protein; TAIR: AT5G41800.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L4X4|GAT2_ARATH Probable GABA transporter 2; TrEMBL-Plants: tr|I1K6A7|I1K6A7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0122800 LjG1.1_chr4 17743104 17744455 +
2 domain predictions
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LotjaGi4g1v0122800.2
n.a. Amino acid transporter family protein; TAIR: AT5G41800.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q8L4X4|GAT2_ARATH Probable GABA transporter 2; TrEMBL-Plants: tr|K7KRY1|K7KRY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0122800 LjG1.1_chr4 17743110 17744455 +
2 domain predictions
 –
LotjaGi4g1v0135000.1
n.a. Amino acid transporter, putative; TAIR: AT2G42005.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|F4ILY9|ANTL1_ARATH Amino acid transporter ANTL1; TrEMBL-Plants: tr|V7CH69|V7CH69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0135000 LjG1.1_chr4 19679630 19681148 +
2 domain predictions
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LotjaGi4g1v0168000.1
n.a. Amino acid transporter, putative; TAIR: AT3G30390.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q5SPB1|S38A2_DANRE Sodium-coupled neutral amino acid transporter 2; TrEMBL-Plants: tr|I3T326|I3T326_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0168000 LjG1.1_chr4 32215152 32220373 +
2 domain predictions
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LotjaGi4g1v0226800.1
n.a. Proline transporter; TAIR: AT3G55740.1 proline transporter 2; Swiss-Prot: sp|P92962|PROT2_ARATH Proline transporter 2; TrEMBL-Plants: tr|I3T3A9|I3T3A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0226800 LjG1.1_chr4 53646328 53650041 +
2 domain predictions
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LotjaGi4g1v0328800.1
n.a. Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|A0A1J7GJJ9|A0A1J7GJJ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0328800 LjG1.1_chr4 70763588 70767543 +
2 domain predictions
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LotjaGi4g1v0328800.2
n.a. Lysine histidine transporter; TAIR: AT1G67640.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9SR44|LHTL2_ARATH Lysine histidine transporter-like 2; TrEMBL-Plants: tr|A0A1J7GJJ9|A0A1J7GJJ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0328800 LjG1.1_chr4 70764845 70765213 +
2 domain predictions
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LotjaGi4g1v0412100.1
n.a. Amino acid permease; TAIR: AT5G09220.1 amino acid permease 2; Swiss-Prot: sp|Q38967|AAP2_ARATH Amino acid permease 2; TrEMBL-Plants: tr|I1K519|I1K519_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0412100 LjG1.1_chr4 78799740 78803711 -
2 domain predictions
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