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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3375770 |
| Transcript ID | Lj3g3v3375770.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| |
| Working Lj name | LjHar1 |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 38 | 38 | – | – | |
| PANTHER | 19 | 349 | 331 | 0 | – | |
| PANTHER | 19 | 349 | 331 | 0 | – | |
| Phobius | 39 | 61 | 23 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Pfam | 62 | 105 | 44 | 5.70E-09 | ||
| Phobius | 62 | 677 | 616 | – | – | |
| Gene3D | 65 | 254 | 190 | 8.10E-41 | ||
| SUPERFAMILY | 113 | 456 | 344 | 9.42E-62 | – | |
| SMART | 155 | 179 | 25 | 180 | ||
| Gene3D | 255 | 387 | 133 | 1.90E-28 | ||
| Pfam | 279 | 301 | 23 | 1.5 | ||
| SMART | 301 | 325 | 25 | 91 | ||
| SUPERFAMILY | 342 | 667 | 326 | 1.12E-49 | ||
| SMART | 373 | 397 | 25 | 49 | ||
| PANTHER | 388 | 1004 | 617 | 0 | – | |
| PANTHER | 388 | 1004 | 617 | 0 | – | |
| Gene3D | 391 | 653 | 263 | 1.20E-59 | ||
| SMART | 516 | 540 | 25 | 62 | ||
| Pfam | 566 | 625 | 60 | 6.90E-08 | ||
| SMART | 612 | 635 | 24 | 66 | ||
| Gene3D | 668 | 738 | 71 | 3.80E-04 | ||
| TMHMM | 676 | 698 | 23 | – | – | |
| Phobius | 678 | 699 | 22 | – | – | |
| Phobius | 700 | 1020 | 321 | – | – | |
| SUPERFAMILY | 723 | 1004 | 282 | 2.16E-71 | ||
| SMART | 729 | 1004 | 276 | 6.20E-26 | ||
| ProSiteProfiles | 729 | 1005 | 277 | 35.99 | ||
| Pfam | 730 | 1004 | 275 | 1.00E-40 | ||
| Gene3D | 739 | 805 | 67 | 1.00E-20 | – | |
| Gene3D | 806 | 1009 | 204 | 9.90E-41 | – | |
| ProSitePatterns | 850 | 862 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v3375770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3375770.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.