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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001245
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We have found 1129 results. Now displaying 7 of 23 with 50 rows per page. This search has taken 5.687s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0016510.1
n.a. PREDICTED: probable receptor-like protein kinase At1g80640-like [Glycine max] gi|356557227|ref|XP_003546919.1| chr3 353202 356605 -
2 domain predictions
2 GO terms
Lj3g3v0234090.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101-like [Glycine max] gi|356556159|ref|XP_003546394.1| chr3 1402472 1405345 -
2 domain predictions
2 GO terms
Lj3g3v0234090.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101-like [Glycine max] gi|356556159|ref|XP_003546394.1| chr3 1403711 1405345 -
2 domain predictions
2 GO terms
Lj3g3v0234090.3
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101-like [Glycine max] gi|356556159|ref|XP_003546394.1| chr3 1403711 1405345 -
2 domain predictions
2 GO terms
Lj3g3v0290100.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490568|dbj|BAI79271.1| chr3 1825073 1832536 -
2 domain predictions
2 GO terms
Lj3g3v0290420.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357454715|ref|XP_003597638.1| chr3 2004251 2005300 +
2 domain predictions
2 GO terms
Lj3g3v0310070.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356547351|ref|XP_003542077.1| chr3 2319016 2326925 -
2 domain predictions
2 GO terms
Lj3g3v0381650.1
n.a. Serine/threonine protein kinase-like protein ACR4 [Medicago truncatula] gi|357454477|ref|XP_003597519.1| chr3 3047882 3051899 -
2 domain predictions
2 GO terms
Lj3g3v0392830.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3171239 3176050 +
2 domain predictions
2 GO terms
Lj3g3v0392830.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3172546 3176050 +
2 domain predictions
2 GO terms
Lj3g3v0392830.3
n.a. Cysteine-rich receptor-like protein kinase, partial [Medicago truncatula] gi|358345186|ref|XP_003636663.1| chr3 3174711 3176050 +
2 domain predictions
2 GO terms
Lj3g3v0392840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3178342 3181288 +
2 domain predictions
2 GO terms
Lj3g3v0397040.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X3 [Cicer arietinum] gi|502177302|ref|XP_004516051.1| chr3 3262874 3277527 -
2 domain predictions
2 GO terms
Lj3g3v0397040.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X2 [Cicer arietinum] gi|502177298|ref|XP_004516050.1| chr3 3262874 3294883 -
2 domain predictions
2 GO terms
Lj3g3v0397040.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X1 [Cicer arietinum] gi|502177294|ref|XP_004516049.1| chr3 3262874 3294883 -
2 domain predictions
2 GO terms
Lj3g3v0420630.1
n.a. PREDICTED: U-box domain-containing protein 35-like isoform X3 [Cicer arietinum] gi|502132632|ref|XP_004501456.1| chr3 3636574 3641400 +
2 domain predictions
2 GO terms
Lj3g3v0669190.1
n.a. PREDICTED: receptor-like protein kinase THESEUS 1-like [Glycine max] gi|356546894|ref|XP_003541856.1| chr3 7306959 7307550 +
2 domain predictions
2 GO terms
Lj3g3v0685950.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514866|ref|XP_003526123.1| chr3 7565909 7570099 +
2 domain predictions
2 GO terms
Lj3g3v0697050.1
n.a. S-locus lectin protein kinase family protein [Theobroma cacao] gi|508721008|gb|EOY12905.1| chr3 7606630 7607312 +
2 domain predictions
2 GO terms
Lj3g3v0950610.1
n.a. protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain [Arabidopsis thaliana] gi|15219417|ref|NP_178075.1| chr3 12130820 12138240 -
3 domain predictions
2 GO terms
Lj3g3v0950630.1
n.a. kinase family protein [Arabidopsis lyrata subsp]. lyrata] gi|297844550|ref|XP_002890156.1| chr3 12141497 12146087 -
3 domain predictions
2 GO terms
Lj3g3v0950630.2
n.a. protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain [Arabidopsis thaliana] gi|15219417|ref|NP_178075.1| chr3 12141497 12149694 -
3 domain predictions
2 GO terms
Lj3g3v1038840.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase At1g78530-like isoform X1 [Cicer arietinum] gi|502087899|ref|XP_004488675.1| chr3 13807831 13811612 +
2 domain predictions
2 GO terms
Lj3g3v1064900.3
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Glycine max] gi|356495007|ref|XP_003516372.1| chr3 14411702 14419832 +
2 domain predictions
2 GO terms
Lj3g3v1239980.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356542792|ref|XP_003539849.1| chr3 16187174 16191539 -
2 domain predictions
2 GO terms
Lj3g3v1261130.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356542042|ref|XP_003539480.1| chr3 16271690 16275645 -
2 domain predictions
2 GO terms
Lj3g3v1295710.1
n.a. PREDICTED: probable receptor-like protein kinase At1g49730-like [Cicer arietinum] gi|502083383|ref|XP_004487442.1| chr3 16550602 16552921 -
2 domain predictions
2 GO terms
Lj3g3v1486980.1
n.a. Serine/threonine-protein kinase CTR1 [Triticum urartu] gi|474096205|gb|EMS55060.1| chr3 18901302 18910596 -
3 domain predictions
2 GO terms
Lj3g3v1486980.2
n.a. Serine/threonine-protein kinase CTR1 [Triticum urartu] gi|474096205|gb|EMS55060.1| chr3 18901302 18910596 -
3 domain predictions
2 GO terms
Lj3g3v1855390.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform X3 [Cicer arietinum] gi|502158354|ref|XP_004511117.1| chr3 23637901 23641007 +
2 domain predictions
2 GO terms
Lj3g3v1855390.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform X2 [Cicer arietinum] gi|502158352|ref|XP_004511116.1| chr3 23637901 23641007 +
2 domain predictions
2 GO terms
Lj3g3v1855410.1
n.a. S-locus lectin protein kinase family protein [Medicago truncatula] gi|357515489|ref|XP_003628033.1| chr3 23643688 23645825 +
2 domain predictions
2 GO terms
Lj3g3v1933090.1
n.a. PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like [Cicer arietinum] gi|502152677|ref|XP_004509039.1| chr3 24933513 24937680 +
2 domain predictions
2 GO terms
Lj3g3v2027320.2
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Cicer arietinum] gi|502089434|ref|XP_004488910.1| chr3 25915809 25925300 +
2 domain predictions
2 GO terms
Lj3g3v2318170.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490570|dbj|BAI79272.1| chr3 28753854 28761808 -
2 domain predictions
2 GO terms
Lj3g3v2532330.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6-like [Cicer arietinum] gi|502156674|ref|XP_004510591.1| chr3 31123388 31132676 +
2 domain predictions
2 GO terms
Lj3g3v2577160.1
n.a. Kinase-like protein [Medicago truncatula] gi|357514029|ref|XP_003627303.1| chr3 32023507 32025825 -
2 domain predictions
2 GO terms
Lj3g3v2692990.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356522430|ref|XP_003529849.1| chr3 32791606 32797830 +
2 domain predictions
2 GO terms
Lj3g3v2692990.2
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356522430|ref|XP_003529849.1| chr3 32791606 32797830 +
2 domain predictions
2 GO terms
Lj3g3v2780560.1
n.a. PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Glycine max] gi|356547026|ref|XP_003541919.1| chr3 34202739 34210328 -
2 domain predictions
2 GO terms
Lj3g3v2861380.2
n.a. leucine-rich repeat transmembrane protein kinase [Glycine max] gi|223452404|gb|ACM89529.1| chr3 35339977 35341914 +
2 domain predictions
2 GO terms
Lj3g3v2887100.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr3 35627219 35630129 +
2 domain predictions
2 GO terms
Lj3g3v2888290.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max] gi|356544860|ref|XP_003540865.1| chr3 35706091 35711245 +
2 domain predictions
2 GO terms
Lj3g3v2948570.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356542792|ref|XP_003539849.1| chr3 36724223 36728588 +
2 domain predictions
2 GO terms
Lj3g3v3132890.1
n.a. PREDICTED: receptor-like protein kinase HERK 1-like [Glycine max] gi|356542591|ref|XP_003539750.1| chr3 39032314 39035838 -
2 domain predictions
2 GO terms
Lj3g3v3200890.1
n.a. protein kinase APK1A, chloroplastic-like [Glycine max] gi|358248046|ref|NP_001240055.1| chr3 39539739 39543121 +
2 domain predictions
2 GO terms
Lj3g3v3236840.1
n.a. TPR-containing protein kinase [Glycine max] gi|351721750|ref|NP_001236708.1| chr3 39903144 39905450 +
2 domain predictions
2 GO terms
Lj3g3v3337510.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358346648|ref|XP_003637378.1| chr3 40748815 40751642 +
2 domain predictions
2 GO terms
Lj3g3v3348680.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] gi|356509565|ref|XP_003523518.1| chr3 41158487 41164700 -
2 domain predictions
2 GO terms
Lj3g3v3375760.2
n.a. S-receptor kinase-like protein 2 [Lotus japonicus] gi|33945885|emb|CAE45595.1| chr3 41502576 41510652 +
2 domain predictions
2 GO terms