Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004589
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 21 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.650s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0054419.1
n.a. PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cicer arietinum] gi|502129734|ref|XP_004500407.1| chr0 17451173 17455169 -
2 domain predictions
2 GO terms
Lj2g3v1549970.1
n.a. PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Cicer arietinum] gi|502162030|ref|XP_004512366.1| chr2 24460880 24470970 +
2 domain predictions
2 GO terms
Lj2g3v1643230.1
n.a. PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine max] gi|356569961|ref|XP_003553162.1| chr2 25456755 25470290 +
2 domain predictions
2 GO terms
Lj4g3v2526040.1
n.a. PREDICTED: ATP-dependent DNA helicase Q-like 5-like isoform X1 [Cicer arietinum] gi|502141185|ref|XP_004504477.1| chr4 34074837 34082310 +
2 domain predictions
2 GO terms
Lj4g3v2692430.1
n.a. PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1 [Cicer arietinum] gi|502076854|ref|XP_004485478.1| chr4 36306747 36313928 +
2 domain predictions
2 GO terms
Lj5g3v1496740.1
n.a. ATP-dependent DNA helicase Q4 [Medicago truncatula] gi|357441723|ref|XP_003591139.1| chr5 21720168 21723469 +
2 domain predictions
2 GO terms
Lj5g3v1496740.3
n.a. PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cicer arietinum] gi|502117128|ref|XP_004495713.1| chr5 21720168 21725651 +
2 domain predictions
2 GO terms
Lj5g3v1496740.4
n.a. PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cicer arietinum] gi|502117128|ref|XP_004495713.1| chr5 21720168 21725651 +
2 domain predictions
2 GO terms
Lj6g3v2274700.1
n.a. PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1 [Cicer arietinum] gi|502076854|ref|XP_004485478.1| chr6 26554775 26562007 -
2 domain predictions
2 GO terms
LotjaGi2g1v0344800.1
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G31360.1 RECQ helicase L2; Swiss-Prot: sp|Q9FT73|MED34_ARATH Mediator of RNA polymerase II transcription subunit 34; TrEMBL-Plants: tr|A0A151RUE2|A0A151RUE2_CAJCA ATP-dependent DNA helicase Q1; Found in the gene: LotjaGi2g1v0344800 LjG1.1_chr2 82187441 82197739 +
2 domain predictions
2 GO terms
LotjaGi4g1v0329000.1
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G27880.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5; TrEMBL-Plants: tr|I1KRZ4|I1KRZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329000 LjG1.1_chr4 70779239 70786904 +
2 domain predictions
2 GO terms
LotjaGi5g1v0222800.1
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT5G27680.1 RECQ helicase SIM; Swiss-Prot: sp|Q9FT69|RQSIM_ARATH ATP-dependent DNA helicase Q-like SIM; TrEMBL-Plants: tr|G7I8P0|G7I8P0_MEDTR RecQ family ATP-dependent DNA helicase; Found in the gene: LotjaGi5g1v0222800 LjG1.1_chr5 52965660 52972189 -
2 domain predictions
2 GO terms
LotjaGi5g1v0228700.1
n.a. ATP-dependent RNA helicase dbp3; TAIR: AT3G05740.1 RECQ helicase l1; Swiss-Prot: sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1; TrEMBL-Plants: tr|A0A151U4Z2|A0A151U4Z2_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0228700 LjG1.1_chr5 53595003 53600715 +
2 domain predictions
2 GO terms
LotjaGi5g1v0228700.2
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT3G05740.1 RECQ helicase l1; Swiss-Prot: sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1; TrEMBL-Plants: tr|A0A151U4Z2|A0A151U4Z2_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0228700 LjG1.1_chr5 53595191 53599911 +
2 domain predictions
2 GO terms
LotjaGi5g1v0228700.3
n.a. ATP-dependent RNA helicase dbp3; TAIR: AT3G05740.1 RECQ helicase l1; Swiss-Prot: sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1; TrEMBL-Plants: tr|A0A151U4Z2|A0A151U4Z2_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0228700 LjG1.1_chr5 53595191 53599911 +
2 domain predictions
2 GO terms
LotjaGi6g1v0046900.1
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G31360.1 RECQ helicase L2; Swiss-Prot: sp|Q9CL21|RECQ_PASMU ATP-dependent DNA helicase RecQ; TrEMBL-Plants: tr|A0A0B2QEX8|A0A0B2QEX8_GLYSO Werner syndrome ATP-dependent helicase like; Found in the gene: LotjaGi6g1v0046900 LjG1.1_chr6 8640138 8651823 +
2 domain predictions
2 GO terms
LotjaGi6g1v0223800_LC.3
n.a. ATP-dependent RNA helicase RhlB; TAIR: AT4G35740.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3; TrEMBL-Plants: tr|A0A0L9UBS6|A0A0L9UBS6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0223800_LC LjG1.1_chr6 52878390 52888125 +
2 domain predictions
2 GO terms
LotjaGi6g1v0223800_LC.5
n.a. ATP-dependent RNA helicase RhlB; TAIR: AT4G35740.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3; TrEMBL-Plants: tr|A0A151RMA8|A0A151RMA8_CAJCA ATP-dependent DNA helicase Q5; Found in the gene: LotjaGi6g1v0223800_LC LjG1.1_chr6 52878492 52886829 +
2 domain predictions
2 GO terms
LotjaGi6g1v0223800_LC.7
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT4G35740.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3; TrEMBL-Plants: tr|A0A151RMA8|A0A151RMA8_CAJCA ATP-dependent DNA helicase Q5; Found in the gene: LotjaGi6g1v0223800_LC LjG1.1_chr6 52878541 52882513 +
2 domain predictions
2 GO terms
LotjaGi6g1v0361700.1
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G10930.1 DNA helicase (RECQl4A); Swiss-Prot: sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A; TrEMBL-Plants: tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase RecQ family protein; Found in the gene: LotjaGi6g1v0361700 LjG1.1_chr6 67368666 67383013 -
2 domain predictions
2 GO terms
LotjaGi6g1v0361700.2
n.a. ATP-dependent RNA helicase DeaD; TAIR: AT1G10930.1 DNA helicase (RECQl4A); Swiss-Prot: sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A; TrEMBL-Plants: tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase RecQ family protein; Found in the gene: LotjaGi6g1v0361700 LjG1.1_chr6 67375232 67383008 -
2 domain predictions
2 GO terms