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recQ_fam: ATP-dependent DNA helicase, RecQ family
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cicer arietinum] gi|502129734|ref|XP_004500407.1| | 18 | ||
| – | PREDICTED: mediator of RNA polymerase II transcription subunit 34-like [Cicer arietinum] gi|502162030|ref|XP_004512366.1| | 29 | ||
| – | PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine max] gi|356569961|ref|XP_003553162.1| | 35 | ||
| – | PREDICTED: ATP-dependent DNA helicase Q-like 5-like isoform X1 [Cicer arietinum] gi|502141185|ref|XP_004504477.1| | 24 | ||
| – | PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1 [Cicer arietinum] gi|502076854|ref|XP_004485478.1| | 21 | ||
| – | ATP-dependent DNA helicase Q4 [Medicago truncatula] gi|357441723|ref|XP_003591139.1| | 20 | ||
| – | PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cicer arietinum] gi|502117128|ref|XP_004495713.1| | 26 | ||
| – | PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Cicer arietinum] gi|502117128|ref|XP_004495713.1| | 26 | ||
| – | PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1 [Cicer arietinum] gi|502076854|ref|XP_004485478.1| | 28 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT1G31360.1 RECQ helicase L2; Swiss-Prot: sp|Q9FT73|MED34_ARATH Mediator of RNA polymerase II transcription subunit 34; TrEMBL-Plants: tr|A0A151RUE2|A0A151RUE2_CAJCA ATP-dependent DNA helicase Q1; Found in the gene: LotjaGi2g1v0344800 | 30 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT1G27880.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5; TrEMBL-Plants: tr|I1KRZ4|I1KRZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329000 | 21 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT5G27680.1 RECQ helicase SIM; Swiss-Prot: sp|Q9FT69|RQSIM_ARATH ATP-dependent DNA helicase Q-like SIM; TrEMBL-Plants: tr|G7I8P0|G7I8P0_MEDTR RecQ family ATP-dependent DNA helicase; Found in the gene: LotjaGi5g1v0222800 | 28 | ||
| – | ATP-dependent RNA helicase dbp3; TAIR: AT3G05740.1 RECQ helicase l1; Swiss-Prot: sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1; TrEMBL-Plants: tr|A0A151U4Z2|A0A151U4Z2_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0228700 | 20 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT3G05740.1 RECQ helicase l1; Swiss-Prot: sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1; TrEMBL-Plants: tr|A0A151U4Z2|A0A151U4Z2_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0228700 | 20 | ||
| – | ATP-dependent RNA helicase dbp3; TAIR: AT3G05740.1 RECQ helicase l1; Swiss-Prot: sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1; TrEMBL-Plants: tr|A0A151U4Z2|A0A151U4Z2_CAJCA Bloom syndrome protein isogeny; Found in the gene: LotjaGi5g1v0228700 | 20 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT1G31360.1 RECQ helicase L2; Swiss-Prot: sp|Q9CL21|RECQ_PASMU ATP-dependent DNA helicase RecQ; TrEMBL-Plants: tr|A0A0B2QEX8|A0A0B2QEX8_GLYSO Werner syndrome ATP-dependent helicase like; Found in the gene: LotjaGi6g1v0046900 | 36 | ||
| – | ATP-dependent RNA helicase RhlB; TAIR: AT4G35740.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3; TrEMBL-Plants: tr|A0A0L9UBS6|A0A0L9UBS6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0223800_LC | 13 | ||
| – | ATP-dependent RNA helicase RhlB; TAIR: AT4G35740.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3; TrEMBL-Plants: tr|A0A151RMA8|A0A151RMA8_CAJCA ATP-dependent DNA helicase Q5; Found in the gene: LotjaGi6g1v0223800_LC | 13 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT4G35740.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3; TrEMBL-Plants: tr|A0A151RMA8|A0A151RMA8_CAJCA ATP-dependent DNA helicase Q5; Found in the gene: LotjaGi6g1v0223800_LC | 14 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT1G10930.1 DNA helicase (RECQl4A); Swiss-Prot: sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A; TrEMBL-Plants: tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase RecQ family protein; Found in the gene: LotjaGi6g1v0361700 | 36 | ||
| – | ATP-dependent RNA helicase DeaD; TAIR: AT1G10930.1 DNA helicase (RECQl4A); Swiss-Prot: sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A; TrEMBL-Plants: tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase RecQ family protein; Found in the gene: LotjaGi6g1v0361700 | 36 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.76 |