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LotjaGi4g1v0329000.1

Overview

Field Value
Gene ID LotjaGi4g1v0329000
Transcript ID LotjaGi4g1v0329000.1
Lotus japonicus genome version Gifu v1.2
Description ATP-dependent RNA helicase DeaD; TAIR: AT1G27880.1 DEAD/DEAH box RNA helicase family protein; Swiss-Prot: sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5; TrEMBL-Plants: tr|I1KRZ4|I1KRZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:70779239..70786904) extracted from Lotus japonicus Gifu genome v1.2.

AGGATTTCATGAAGCCCATAGCCCAACACGGCCCAAAAATCTAACCCATAAAAAAAATCAGAAAAATATTTGGCGGGAAA TGTTGATATAAATGTTAGCTTCATCTTCGTCTTCATCTGCTCCGACCCGACAAAAAATGGAGTCCGATTCAGACTCCGAC GGGTCTCACGTCTCTACAACTCCACCACGACAAGCAAATCCACCACCGCCACCACCACCGTCACCGCCACCAAAACCACC TCTTCTAGTCCCCAACAAACCCAAAAGAATCAGAATCAAGCCCTCAAAACCCAAACCACTCCCTCCCAAACCCCATCACA GCCCCTCAAAACCCGACCCGGAAGATCCAGAGCCAGACCCTCTCTCCCTCCCTTCCGCGCCCTTCCAAATTCGCCGTCAC TCTGATTCTGTTCCGGCGTCGTCGACTTCCCACTCCATCGAAAACCTTCCCGCCGGGTTCTTCTCCAAATTCGCTTCCTT CTCGAAGATTCGAAGACCGGTTCTCAATCTAGAATCTTCTACAGACGAACCGGTTAGCAATTCAGACGCTGGGAACTCCG GGAAGCTCGAGAAGGTTGAGAAGAAGAAGCATCTTAACTTGATTGGTGCTAGCGTGCCGATGCCGACGGTGAAGCTGCGA AAGAGTGGTGGCGGTGGCGTCGGTGGCGTTGGCGAAGGGAATTTCGTGAAGCTGAACTTGTGTGGGAGAAAAAGGAAGTT TATGAAGAAGGGGTGGAAGAAGAATGGGAAATTTGGTGGTAGATGGAACAAGAGAAGTAAAGGTAAATTGGAACAAGATG GGGAGGATGATGAGGAGGAGGGTGGTTCTGGAAATGCTGCACAGCAACAGAAGAAGCAAAGGGGGCGTTGTAAGACAAGG GAGATTGACTGCGAAGCGGTGGAAGAGGCTGTTTCCGCGGCTCGAGATGAGGTATCTGATGAGAACTTGGTGAAGTTGCT GCAATTGATTTATGGTTATGAGTGTTTTCGAGAGGGGCAGCTTGAGGCTATCAAGATGGTTCTTGCTGGGAAATCAACCA TGCTTATTTTGCCGACAGGGGCGGGGAAATCGTTGTGTTATCAGTTGCCTGCGATGATTTTGCCTGGGATTACCTTGGTT GTTAGTCCATTGGTAGCATTAATCATTGATCAGCTAAAGCAATTGCCTTCTTGCATTAGGGGTGCTCTCATCAGCAGCAC CCAGGTGTGTTTTGTAGCCTTTCACAGTCTTCCTTACTCACATTTTAGCTTATTGATAACTTGGTGTGTGTTTGATTTTG GTTGAGTGGTGGACACAGAAGTCAATGCACTTCTCCTCTAAAGTTGCATTTTGTAGCTTATTGCTAGAAGCCTAGAATTG ATTTTGGAACCTAAATTGGTTTGTAAAACCTAAACCAAACCTACTATGGCATGATATTTTTTAAGAAACAATAACGGCCA TAGTATTTTTTTTCGTATGGTCAGCACATGAATCAAATAATGTTTGTGTAATTGTGTTATCTTATTATGAACCATATCTA ATGACAGATAATTTAAGTTCAAATCTTTCTTAATTGATTTATTTTTGTTTCATTGTTTTAGACTCTTGAAGAAGCCTCTG AAACTCTGGTCCAGCTTCGAGAAGGTGCGATTAAGGTGGGACTTTTGACGACTGAATGCAACTTTTGGCACAGATTAGTT TTGCAGAAATATGTAGCACTCTTGCAGATTGATTTGCATATTGGTGGTGTCAATTGTTTATAGGCCATTTTTGTTTGACA CATTTTCCTATCACGGTTTATTTATAGAAGGTGGTTACTCACTCTTACCTGAAAATGTTTATAACTCTAATTCATACAGG TGCTTTTTGTTTCACCAGAGCGGTTCCTGAACGAAGAGTTTCTGTCTACTATTTCTGCCGGGTCGGCTGTGTCACTTGTT GTTATTGACGAAGCGCATTGTATATCTGAATGGTGAGTGAATTCCAATTTTCATTTGGTGATATTCATATTTTGTACTTT GAGATCTCACGTTGTATGCTTCTGCTTCCTTGCTCATCATTAGATTTTAAACTATTTTACAGGTCTCACAATTTCCGACC TTCATTCATGAGACTTAGAGCATCTCTGCTTCATAAAAGGCTTAATGTAGGTTCTGTTCTAGCAATGACAGCAACTGCTA CAACCACCACTTTAGATGCCATCATCTCTGCACTAGATATTCCTCGTACCAATCTTATTCAGAAGGCACAGTTAAGGGAC AATTTTCATTTATCAGTGTCGATGGTAAAAAATAGGCAAGTTAGATGCTGCTATTTACTTGGTTAGTTTGTATGCATTCT TCATCTGAACTTTGTTAAACTTACACATCAATTCTTTGAACATCATAGAATGAAAGACCTCCTGCTTCTGATAAAGTCTT CTCCATTTGCGGAAGTTCAAAGCATCATCATATACTGCAAATTTCAGGTGTGAGCATGGATTTTTTTTTTCTATTTTGAA GTACTGGGTGCTCTATGATTTGATAAACTCATCCGCATTTGTCGCAATATCTTTTCTCTTCTAGTTCACAGCATTTGATA TGTATAATATTGTTTAGAATATGGCTAATTACTTAGGCTTGCAAGTAATATTGTTTACTATAGTGGATATATCATATATA GTAACTTCTCTACATATGTAGAAATTGATTATGCCTTTTCTTGTTCCAGATAGAAACTGATACAATTAGCAGATACTTGA ATGATAACAATATCTTGGCAAAGGTTAGCTCCCTATTTCTCTTTTTGACATTGCATGTCTTTCTGTAACCCTTGACGCTG AATGTTAAATCTGAAGATTGTTGTGAATTATGATCTAGAGTTATCACAGTGGTATCACTTCAAAGGAACGTAGCTATGTG CAGGAGTTGTTTAGTTCCAACAAGATCAGAGTGGTAGGATGAATTTTATGGTTCTAATCACTAATTTTATCAATTTCTTG GTGCGATGATTTTTTACATAGTATTCTTCATTTTTTTCTATCTTTGGTTCATTTAGTACAACAATACTACGCCAATTGAT ACCTTGCAATTTTTCATGAAGGTCGTTGCGACTGTGGCATTTGGAATGGGACTAGATAAAAGAGATGTTGGAGCAGTAAG GCTAATAATACATTATGGTTTTCACTATTCAGCATTAATTTGTCCGAACTGGTTTCGGACAATATAAGTTATCTCGGATG GTATACTTAAACAGTGATTCATTGATTCTCATTGTGCTCTCGTTGCTTGTCCATTTTCTAATGTTTCAAACCTGAAATTT TGCTGTATCAGAAACAATTGCTTCTTTCTGAAAAGATTTTTATTTTGTTAAAATTGCAAAATGGGAGGGGGGTGGTTTTG GAAAACTGGGCTCTTTTGCTGGTCTCTGTTCATGGGTAGTTCCTTTAATTGATAGTTACCATTTACAAATGCTGTTGACA ATGCATAAACTATTCTCTTGTATTTCACATTACATATTTGCATTACTATATAAAGATCCTGTATGTCACAGTAATTCATA ATGGATCTTCATTGCCATATCTTTGTTTAGGTAATTCATTACAGTTTGCCTGAAAGTCTTGAAGAGTATGTACAGGTATA TGATTTCTTCTAAACTCTAGTAGTAGCATGGCAATCTATCACATGTTTTGCTTAATATATGGAATGGGTACTTTAGGAAA TCGGACGTGCTGGAAGAGATGGGAGGTTGTCTTATTGTCACCTATTTTATGACGATGAGACATATTTCAAACTTCGTAGT CTAATGTACAGGTAAGACAATTCTTCTTCTTTTTTCCACACTGCCAAATTGTTCTTTATTTGATGCATTTCTTATCCTCA GTGAAGGAGTAGATGAGTATGCAGTGAATAAATTTCTGCGCGAAGTGTTTCCTTCTGACAAAAACTCATGTGGGAAAATC TGTTCATTAATCAAAGAATCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTACTCTACTCAATACTAACTTTGAATTT AAATTTTATTAACTTTAATAACTCGATTGAGTGATTTCGGTTAAAACTTTCAATGGATTTCATAACATCTTGATGAGGAG TTAGTCATGCTGATGTTATGATGATTAATGGAGGGAAATTGCAAATTGCTGATAGCCATGTCAGTAGCTTCAATGTTTTT GGACATGCTTGAATTAAGAGAATCATTAGCATAGTATCTGTGGGGTATGCATGCTCGGGGTAAAATGTCATTTTTAGGCA TTATGATTGTAGGTAATCTTGTAAAAGTGCACGAATGTGATTTTGTTTATCTCTCTCCTTTTTAAGTTCTTGAAACCTGA GAGATCAACTTTAGACCAGACAAAGTAATGTGGAGTTTCTGAACATGATTAGGATTTTACATTTATTTATTTTATGGGCA ACCATCTAATTACAAGTACTAGTAATTTTTCTACTTACGTAAGGAAATAGAAGCACATGCTAGTAATGAAACCGCTTCTT GTAATGAAACTCTAGATTGTTATATGTTGACTTTCAGTGTCTTGGTCTACAGTTTAAAACTTTTCTCCAATATTTTCCTT TATTAGGTGATGCTCACACTTTTGACACGCTTGGAGTTGGGCGATGTGCAGTACTTGCATGTACTTCCACCGATAAATGT AACTTGTGTTTTGAATTTTCATAAGGTGTGTGTGTACCTTTGACTGCATTAGATTTTTGTCATAAATAAATTTGTGAACA CTATCTATCTAAGTTTATATGTTAAACTATTGATTTAAGATTAAGTTTTCAAATTGGACATTTCCATGTCATTTTTTGCT GAAATTTAGAGAAATAAGTGTGATTTCACTGATTAATTTGTTGGTTATATTTTTAATTTCTGGCACTAATGCAGACTCCA CCACCGTTCCTTGCCAAAAAGGATTCTGCTATTGCAGTAATTATAAAAAGGTAACAATAAACATATTACATTTCTTTGCT TTTCACTGTTTCAAAACTTTTCCCTGTTTCCCTTGGATGGTCTGGTCATTATCCTACAAATTATTTCAATGTTGTAGACT TTGAGATGGAGTTTGATTCCAAAATTTCAGTTTCTATAAAGGGAAGGAATACCTACTGATGGTGCTTGGTTGTTCCTGAT TACGAACACTGGAAAAGCAGTTTAATTCTAGTTATACTCATACATCTCATCTTTAACTGAATCGTTGTTATGTGATTTTC AGATCTGAAAGTAAGACAGGGCAATATGTTTTTGATATTCCAACTGTGGCAAATGACATGGGAGTTACTGCAGTTGAATT AACAAATCAGCTGTCCAACCTGAAGGTTTGGATTTGTGAATAACTCGAAATATTTTTTTCAAGAGTTCGCGCATGGACAT AACATAACAAAGGATGTTTTGAAAGTACATGAGAGATCTTCCTTCTTCTGAGTAATTAAATTTAAATTCAATATATTTTT GTCATGATCTGGAAAGATAGTGTGCTTGGCTGTCTGTGTGCATGAGGGGGTTGTTTAAATTTTAATTTTGCATAAAGTAT TTCCAATTCATTCTCTATTTTGGGGCCCCTAACTATTTTTGTGTGTGTGGTATTAGTAGCAGTCTTGTTTGTACTGTGGT ATAAACAATCTAACCTCCTTATTTGTGAAATATTCACAGGTAATGGGAGAAATAACTTATGAAATGAAGGACTTGGCCTA CTGTTATAGGATTGTTGAAATCCCAACAGATCTTTTTTCTCTATCAGCAGATGTTACCCAATGGTTATCTGAAGTTGAAA TTTGCAAGGTAAGTAAATTATGAAAAACTAATGTGAAACTTATCCATTATGATATTTTTGGAGATACATTCATAATTCAT TTAGGACGCCGTATCCTCTGCACAGTTTTTTTGTTTTCATGGGACTCAGATGTATATGAATGTTATTTTGATGTTGCCCC GTATTCCTCTCAATGATCAATGAGTCCGGTTGGATAATTTATTTTAGATTATATGTCGCATTGTGTGTTTGTAGAGTAAT TCATTAATAAGATTTTACTGATTGATTATTTTCTCATGGTTCTTTCTTCTTTTGAGTAGGTACGAAAAATGGATGCAATG TTTAATGCTGCATATTTTGCTGTAAATCTATGCGACAAGATGCACGGTTGCAGTAATGCCAATCACACACCATGCTTGCA AAGGAAAATATTGGATTACTTTGCAGGAGTTGATAATACTGATTTCTGCAAGAAAATTTCTCAAAGCAGGTTTTTACTTC TCACCAATTTTTGTTACTTAAAGTTCAGTAGTATTGGTAGTAAAGAACACAAATTTAACCTATGACTTCTAAAATAGCTT TTTCGGGTATTCAAAGTCATAAATAAACTTCTCTTGCAAGTTGAGACCAACTTATTTGATTGTAAGGATATACTTCTGCT ATGTGCTATATTGTCTTGTTACTAAAATTGCTTCCATTTACATGGGCAGCCCTTTCCTGCGAGCAGATATAAAGGTGAGT TGTCGCGTGGTCATACTGAGAATCTTAAATAAACTCAGATACATATTATGGTTGAAATTTCTGAAAAAGTATCTATTCCT TTGGGGATCACCAGGTCTTTCTACAAAGTAATTCACAGGCTCGATTTACACCAAGAGCTGTTGCGAGGATAATGCATGGA ATTGCAAGCCCAGCCTATCCTTCTACAACATGGTGTAAAACCCATTTCTGGTACATTGAAATTTAATTTTTTTTATTTGG TGACCATAATTACTTGTTGATAGTAGGAAATAATTTGAGCGACTTAGTGTTTTTTGCACTAGTTTAGTTAGAGTTCTGTA TACATGCACCAATATAAAAAAGTAAACATTAGCCACAATTTGCGATTTCAAAAATTTTAGCTTTTGTTTGGGAAACAAAA AGAGGAGGGAAAACCTAGTGAGCAGTTTCTATTCATTTCAACATTTTTGGCTCCTACTTCTATGTCACAGAAGAAGGTTA AATGTTTATTTGACTTTTTATTTCGCTGTAGGTTTAGGTTTATATCAGTCACTAGAGTAAGGTGCTAAATTGAACTTTTT TTTGTGGGTTGCAGGGGAAGGTATAAGAATGTAGACTTTAAGGTGGTGATGGAAGCAGCAAAGTCAGAACTGAAGAATTA TGTTGGAAAAGATATGCTGTAGCCATTTATTATTGATTTTATCATCTGATTTTTTTTGGATTGAGGGTCCCTGATCTTAA ACCGAATCCATGGTATGCATTGATCCAAGGGAGAAAAAAACAGTAATTTTGGGGACCTATGTGAGTCCTGTCATGTTGTC ACTGGCGTGAATGTGGCGCCAGCACAAGTCTGTTGCCTCAGGTTGTGACATTAACATAGGCCAAATGAAGATTGAAGCTC AACCTAATGCGGTGCTACTCTTGCATTTGTCCATTGGGATACTATGCGTCCTAGGTGGTAAGGGTCAAGGATTTACGACC CTTATCTGTCTTATTCCCCCCCCATTATGTAAATAGCACTCAATGATGAAGGATGCTATCATTAACTTAAATTCAAATAT GTAGTGCATGTAAACTTTCGCCATTACTGAAAAATAACATGTTAAGCAACACAGTGGATGAAGTGTGTGAATATAGAAAT CTGGATCCTCTAATGTTTTTCCATAAAAGAAAAATACATTTTTTTTATATAAGATTTATCACATTA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0329000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTAGCTTCATCTTCGTCTTCATCTGCTCCGACCCGACAAAAAATGGAGTCCGATTCAGACTCCGACGGGTCTCACGT CTCTACAACTCCACCACGACAAGCAAATCCACCACCGCCACCACCACCGTCACCGCCACCAAAACCACCTCTTCTAGTCC CCAACAAACCCAAAAGAATCAGAATCAAGCCCTCAAAACCCAAACCACTCCCTCCCAAACCCCATCACAGCCCCTCAAAA CCCGACCCGGAAGATCCAGAGCCAGACCCTCTCTCCCTCCCTTCCGCGCCCTTCCAAATTCGCCGTCACTCTGATTCTGT TCCGGCGTCGTCGACTTCCCACTCCATCGAAAACCTTCCCGCCGGGTTCTTCTCCAAATTCGCTTCCTTCTCGAAGATTC GAAGACCGGTTCTCAATCTAGAATCTTCTACAGACGAACCGGTTAGCAATTCAGACGCTGGGAACTCCGGGAAGCTCGAG AAGGTTGAGAAGAAGAAGCATCTTAACTTGATTGGTGCTAGCGTGCCGATGCCGACGGTGAAGCTGCGAAAGAGTGGTGG CGGTGGCGTCGGTGGCGTTGGCGAAGGGAATTTCGTGAAGCTGAACTTGTGTGGGAGAAAAAGGAAGTTTATGAAGAAGG GGTGGAAGAAGAATGGGAAATTTGGTGGTAGATGGAACAAGAGAAGTAAAGGTAAATTGGAACAAGATGGGGAGGATGAT GAGGAGGAGGGTGGTTCTGGAAATGCTGCACAGCAACAGAAGAAGCAAAGGGGGCGTTGTAAGACAAGGGAGATTGACTG CGAAGCGGTGGAAGAGGCTGTTTCCGCGGCTCGAGATGAGGTATCTGATGAGAACTTGGTGAAGTTGCTGCAATTGATTT ATGGTTATGAGTGTTTTCGAGAGGGGCAGCTTGAGGCTATCAAGATGGTTCTTGCTGGGAAATCAACCATGCTTATTTTG CCGACAGGGGCGGGGAAATCGTTGTGTTATCAGTTGCCTGCGATGATTTTGCCTGGGATTACCTTGGTTGTTAGTCCATT GGTAGCATTAATCATTGATCAGCTAAAGCAATTGCCTTCTTGCATTAGGGGTGCTCTCATCAGCAGCACCCAGACTCTTG AAGAAGCCTCTGAAACTCTGGTCCAGCTTCGAGAAGGTGCGATTAAGGTGCTTTTTGTTTCACCAGAGCGGTTCCTGAAC GAAGAGTTTCTGTCTACTATTTCTGCCGGGTCGGCTGTGTCACTTGTTGTTATTGACGAAGCGCATTGTATATCTGAATG GTCTCACAATTTCCGACCTTCATTCATGAGACTTAGAGCATCTCTGCTTCATAAAAGGCTTAATGTAGGTTCTGTTCTAG CAATGACAGCAACTGCTACAACCACCACTTTAGATGCCATCATCTCTGCACTAGATATTCCTCGTACCAATCTTATTCAG AAGGCACAGTTAAGGGACAATTTTCATTTATCAGTGTCGATGGTAAAAAATAGAATGAAAGACCTCCTGCTTCTGATAAA GTCTTCTCCATTTGCGGAAGTTCAAAGCATCATCATATACTGCAAATTTCAGATAGAAACTGATACAATTAGCAGATACT TGAATGATAACAATATCTTGGCAAAGAGTTATCACAGTGGTATCACTTCAAAGGAACGTAGCTATGTGCAGGAGTTGTTT AGTTCCAACAAGATCAGAGTGGTCGTTGCGACTGTGGCATTTGGAATGGGACTAGATAAAAGAGATGTTGGAGCAGTAAT TCATTACAGTTTGCCTGAAAGTCTTGAAGAGTATGTACAGGAAATCGGACGTGCTGGAAGAGATGGGAGGTTGTCTTATT GTCACCTATTTTATGACGATGAGACATATTTCAAACTTCGTAGTCTAATGTACAGTGAAGGAGTAGATGAGTATGCAGTG AATAAATTTCTGCGCGAAGTGTTTCCTTCTGACAAAAACTCATGTGGGAAAATCTGTTCATTAATCAAAGAATCTGCTTC ACGCAGGTTTGATATGAAAGAAGAGGTGATGCTCACACTTTTGACACGCTTGGAGTTGGGCGATGTGCAGTACTTGCATG TACTTCCACCGATAAATGTAACTTGTGTTTTGAATTTTCATAAGACTCCACCACCGTTCCTTGCCAAAAAGGATTCTGCT ATTGCAGTAATTATAAAAAGATCTGAAAGTAAGACAGGGCAATATGTTTTTGATATTCCAACTGTGGCAAATGACATGGG AGTTACTGCAGTTGAATTAACAAATCAGCTGTCCAACCTGAAGGTAATGGGAGAAATAACTTATGAAATGAAGGACTTGG CCTACTGTTATAGGATTGTTGAAATCCCAACAGATCTTTTTTCTCTATCAGCAGATGTTACCCAATGGTTATCTGAAGTT GAAATTTGCAAGGTACGAAAAATGGATGCAATGTTTAATGCTGCATATTTTGCTGTAAATCTATGCGACAAGATGCACGG TTGCAGTAATGCCAATCACACACCATGCTTGCAAAGGAAAATATTGGATTACTTTGCAGGAGTTGATAATACTGATTTCT GCAAGAAAATTTCTCAAAGCAGCCCTTTCCTGCGAGCAGATATAAAGGTCTTTCTACAAAGTAATTCACAGGCTCGATTT ACACCAAGAGCTGTTGCGAGGATAATGCATGGAATTGCAAGCCCAGCCTATCCTTCTACAACATGGTGTAAAACCCATTT CTGGGGAAGGTATAAGAATGTAGACTTTAAGGTGGTGATGGAAGCAGCAAAGTCAGAACTGAAGAATTATGTTGGAAAAG ATATGCTGTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0329000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLASSSSSSAPTRQKMESDSDSDGSHVSTTPPRQANPPPPPPPSPPPKPPLLVPNKPKRIRIKPSKPKPLPPKPHHSPSK PDPEDPEPDPLSLPSAPFQIRRHSDSVPASSTSHSIENLPAGFFSKFASFSKIRRPVLNLESSTDEPVSNSDAGNSGKLE KVEKKKHLNLIGASVPMPTVKLRKSGGGGVGGVGEGNFVKLNLCGRKRKFMKKGWKKNGKFGGRWNKRSKGKLEQDGEDD EEEGGSGNAAQQQKKQRGRCKTREIDCEAVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLIL PTGAGKSLCYQLPAMILPGITLVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLN EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMTATATTTTLDAIISALDIPRTNLIQ KAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELF SSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYSEGVDEYAV NKFLREVFPSDKNSCGKICSLIKESASRRFDMKEEVMLTLLTRLELGDVQYLHVLPPINVTCVLNFHKTPPPFLAKKDSA IAVIIKRSESKTGQYVFDIPTVANDMGVTAVELTNQLSNLKVMGEITYEMKDLAYCYRIVEIPTDLFSLSADVTQWLSEV EICKVRKMDAMFNAAYFAVNLCDKMHGCSNANHTPCLQRKILDYFAGVDNTDFCKKISQSSPFLRADIKVFLQSNSQARF TPRAVARIMHGIASPAYPSTTWCKTHFWGRYKNVDFKVVMEAAKSELKNYVGKDML
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 15 15 - –
MobiDBLite
mobidb-lite
1 117 117 - –
MobiDBLite
mobidb-lite
32 54 23 - –
MobiDBLite
mobidb-lite
139 156 18 - –
MobiDBLite
mobidb-lite
139 161 23 - –
PANTHER
PTHR13710:SF108
143 922 780 0.0 –
PANTHER
PTHR13710
143 922 780 0.0 –
MobiDBLite
mobidb-lite
216 257 42 - –
Gene3D
G3DSA:3.40.50.300
275 482 208 1.1E-62 –
CDD
cd18018
287 480 194 2.81257E-82 –
TIGRFAM
TIGR00614
289 636 348 4.0E-105
IPR004589
SMART
SM00487
295 491 197 2.0E-23
IPR014001
Pfam
PF00270
302 463 162 9.5E-18
IPR011545
ProSiteProfiles
PS51192
307 477 171 22.348
IPR014001
SUPERFAMILY
SSF52540
339 627 289 1.48E-50
IPR027417
ProSitePatterns
PS00690
414 423 10 -
IPR002464
Gene3D
G3DSA:3.40.50.300
485 671 187 2.7E-44 –
CDD
cd18794
485 618 134 5.04234E-58 –
ProSiteProfiles
PS51194
498 648 151 18.685
IPR001650
Pfam
PF00271
514 608 95 5.9E-16
IPR001650
SMART
SM00490
528 609 82 1.8E-25
IPR001650

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0004386
Molecular function Helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006310
Biological process DNA recombination Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0329000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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