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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005019
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.759s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0050369.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|502155079|ref|XP_004509952.1| chr0 17143528 17146177 +
2 domain predictions
2 GO terms
Lj0g3v0164319.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|356525726|ref|XP_003531474.1| chr0 77810893 77813826 -
2 domain predictions
2 GO terms
Lj0g3v0274889.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|356516982|ref|XP_003527169.1| chr0 142533277 142537915 +
2 domain predictions
2 GO terms
Lj3g3v0392790.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|356557064|ref|XP_003546838.1| chr3 3148185 3150600 +
2 domain predictions
2 GO terms
Lj3g3v0938140.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|356525726|ref|XP_003531474.1| chr3 11443865 11446428 -
2 domain predictions
2 GO terms
Lj3g3v2098140.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|356523269|ref|XP_003530263.1| chr3 26702251 26711336 +
2 domain predictions
2 GO terms
Lj5g3v2297820.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|502131600|ref|XP_004501037.1| chr5 33730480 33733134 -
2 domain predictions
2 GO terms
Lj6g3v1078250.1
n.a. PREDICTED: probable GMP synthase [glutamine]-hydrolyzing] gi|356516982|ref|XP_003527169.1| chr6 12730523 12735428 -
2 domain predictions
2 GO terms
LotjaGi1g1v0417900.1
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT1G75090.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine]-hydrolyzing]; TrEMBL-Plants: tr|A0A072VD87|A0A072VD87_MEDTR DNA-3-methyladenine glycosylase I; Found in the gene: LotjaGi1g1v0417900 LjG1.1_chr1 91179354 91183026 -
2 domain predictions
2 GO terms
LotjaGi3g1v0034200.1
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT3G12710.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine]-hydrolyzing]; TrEMBL-Plants: tr|V7AJL3|V7AJL3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0034200 LjG1.1_chr3 3640392 3643672 +
2 domain predictions
2 GO terms
LotjaGi3g1v0131600.1
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT3G12710.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine]-hydrolyzing]; TrEMBL-Plants: tr|A0A0L9UJ98|A0A0L9UJ98_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0131600 LjG1.1_chr3 16482409 16486064 -
2 domain predictions
2 GO terms
LotjaGi3g1v0349700.1
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT5G57970.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine]-hydrolyzing]; TrEMBL-Plants: tr|I1KGT2|I1KGT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0349700 LjG1.1_chr3 72755140 72764829 +
2 domain predictions
2 GO terms
LotjaGi4g1v0168200.1
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT1G13635.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|P05100|3MG1_ECOLI DNA-3-methyladenine glycosylase 1; TrEMBL-Plants: tr|I3S202|I3S202_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0168200 LjG1.1_chr4 32324762 32327910 -
2 domain predictions
2 GO terms
LotjaGi4g1v0168200.2
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT1G13635.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine]-hydrolyzing]; TrEMBL-Plants: tr|I3S202|I3S202_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0168200 LjG1.1_chr4 32324876 32327980 -
2 domain predictions
2 GO terms
LotjaGi6g1v0203700.1
n.a. DNA-3-methyladenine glycosylase, putative; TAIR: AT5G57970.1 DNA glycosylase superfamily protein; Swiss-Prot: sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine]-hydrolyzing]; TrEMBL-Plants: tr|K7KWJ8|K7KWJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0203700 LjG1.1_chr6 50109703 50114892 -
2 domain predictions
2 GO terms