Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006196
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.525s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0326949.1
n.a. Translation initiation factor [Medicago truncatula] gi|357516503|ref|XP_003628540.1| chr0 170900161 170902049 +
3 domain predictions
3 GO terms
Lj1g3v1134020.1
n.a. PREDICTED: probable RNA-binding protein EIF1AD-like [Cicer arietinum] gi|502163627|ref|XP_004512897.1| chr1 14036925 14041875 -
3 domain predictions
3 GO terms
Lj1g3v1134020.2
n.a. PREDICTED: probable RNA-binding protein EIF1AD-like [Cicer arietinum] gi|502163627|ref|XP_004512897.1| chr1 14036925 14041875 -
3 domain predictions
3 GO terms
Lj1g3v1965100.1
n.a. PREDICTED: eukaryotic translation initiation factor 1A-like [Cicer arietinum] gi|502084002|ref|XP_004487629.1| chr1 23210120 23211857 -
3 domain predictions
3 GO terms
Lj3g3v2364170.1
n.a. PREDICTED: eukaryotic translation initiation factor 1A-like [Cicer arietinum] gi|502084002|ref|XP_004487629.1| chr3 29616556 29618100 +
3 domain predictions
3 GO terms
LotjaGi1g1v0305200.1
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G40780.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q58CY2|EIF1A_BOVIN Probable RNA-binding protein EIF1AD; TrEMBL-Plants: tr|A0A0L9UEA0|A0A0L9UEA0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0305200 LjG1.1_chr1 74426818 74436849 -
3 domain predictions
3 GO terms
LotjaGi1g1v0305200.2
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G40780.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q58CY2|EIF1A_BOVIN Probable RNA-binding protein EIF1AD; TrEMBL-Plants: tr|A0A0L9UEA0|A0A0L9UEA0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0305200 LjG1.1_chr1 74431523 74436911 -
3 domain predictions
3 GO terms
LotjaGi1g1v0392400.1
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G04520.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|P56331|IF1A_ONOVI Eukaryotic translation initiation factor 1A; TrEMBL-Plants: tr|I3SHT8|I3SHT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0392400 LjG1.1_chr1 87694327 87694783 -
3 domain predictions
3 GO terms
LotjaGi3g1v0047700.1
n.a. Translation initiation factor IF-1; TAIR: AT4G11175.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q94KR7|IF1C_SOYBN Translation initiation factor IF-1, chloroplastic; TrEMBL-Plants: tr|G7LDQ8|G7LDQ8_MEDTR Translation initiation factor IF-1; Found in the gene: LotjaGi3g1v0047700 LjG1.1_chr3 5067382 5068924 +
3 domain predictions
3 GO terms
LotjaGi3g1v0390300.1
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G04520.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|P56331|IF1A_ONOVI Eukaryotic translation initiation factor 1A; TrEMBL-Plants: tr|I3T689|I3T689_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0390300 LjG1.1_chr3 78845297 78847641 +
3 domain predictions
3 GO terms
LotjaGi6g1v0337600.1
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G40780.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q3THJ3|EIF1A_MOUSE Probable RNA-binding protein EIF1AD; TrEMBL-Plants: tr|V7AS60|V7AS60_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0337600 LjG1.1_chr6 65208318 65215193 +
3 domain predictions
3 GO terms
LotjaGi6g1v0337600.2
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G40780.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q3THJ3|EIF1A_MOUSE Probable RNA-binding protein EIF1AD; TrEMBL-Plants: tr|V7AS60|V7AS60_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0337600 LjG1.1_chr6 65208431 65214494 +
3 domain predictions
3 GO terms
LotjaGi6g1v0337600.3
n.a. Eukaryotic translation initiation factor 1A; TAIR: AT2G40780.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q3THJ3|EIF1A_MOUSE Probable RNA-binding protein EIF1AD; TrEMBL-Plants: tr|V7AS60|V7AS60_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0337600 LjG1.1_chr6 65208438 65214538 +
3 domain predictions
3 GO terms