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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007818
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We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.674s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Short internode related sequence [Medicago truncatula] gi|357483599|ref|XP_003612086.1| chr0 19605607 19608389 +
n.a. Short internode related sequence [Medicago truncatula] gi|357515113|ref|XP_003627845.1| chr0 134235560 134237875 +
n.a. Lateral root primordium protein-related isoform 3, partial [Theobroma cacao] gi|508785658|gb|EOY32914.1| chr0 188327155 188329372 +
n.a. JHL18I08.14 [Jatropha curcas] gi|317106677|dbj|BAJ53180.1| chr1 25788531 25790111 -
n.a. Short internode related sequence [Medicago truncatula] gi|357483599|ref|XP_003612086.1| chr2 26588306 26590824 -
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508728005|gb|EOY19902.1| chr2 29567811 29571484 -
n.a. Short internode related sequence [Medicago truncatula] gi|357493963|ref|XP_003617270.1| chr2 39227373 39232723 -
n.a. Short internode related sequence [Medicago truncatula] gi|357473439|ref|XP_003607004.1| chr3 1004095 1005182 -
n.a. Short internodes [Medicago truncatula] gi|357456471|ref|XP_003598516.1| chr3 9192986 9196409 +
n.a. Short internode related sequence [Medicago truncatula] gi|357438147|ref|XP_003589349.1| chr5 1515804 1518593 +
n.a. Lateral root primordium protein-related isoform 3, partial [Theobroma cacao] gi|508785658|gb|EOY32914.1| chr6 10752109 10754358 -
n.a. Lateral root primordium protein-related isoform 3, partial [Theobroma cacao] gi|508785658|gb|EOY32914.1| chr6 10752109 10754358 -
n.a. LATERAL ROOT PRIMORDIUM 1 family protein; TAIR: AT5G12330.4 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1; TrEMBL-Plants: tr|I1JIY0|I1JIY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0050100 LjG1.1_chr1 7001965 7009013 +
n.a. LATERAL ROOT PRIMORDIUM 1 family protein; TAIR: AT5G12330.4 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1; TrEMBL-Plants: tr|I1JIY0|I1JIY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0050100 LjG1.1_chr1 7001966 7008393 +
n.a. LATERAL ROOT PRIMORDIUM 1 family protein; TAIR: AT5G12330.4 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1; TrEMBL-Plants: tr|I1JIY0|I1JIY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0050100 LjG1.1_chr1 7002034 7004846 +
n.a. Protein shi related sequence 1; TAIR: AT1G75520.1 SHI-related sequence 5; Swiss-Prot: sp|Q9LQZ5|SRS5_ARATH Protein SHI RELATED SEQUENCE 5; TrEMBL-Plants: tr|V7AQV4|V7AQV4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0424600 LjG1.1_chr1 91917717 91919366 -
n.a. Protein SHI RELATED SEQUENCE 1; TAIR: AT3G51060.1 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q9XGX0|SHI_ARATH Protein SHORT INTERNODES; TrEMBL-Plants: tr|V7CMW6|V7CMW6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0386300 LjG1.1_chr2 88227525 88232265 -
n.a. Lateral root primordium 1; TAIR: AT5G12330.4 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1; TrEMBL-Plants: tr|K7KK00|K7KK00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0109800 LjG1.1_chr3 13554140 13558435 -
n.a. Lateral root primordium 1; TAIR: AT5G12330.1 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1; TrEMBL-Plants: tr|G7LG16|G7LG16_MEDTR LRP1 carboxy-terminal domain protein; Found in the gene: LotjaGi3g1v0318100 LjG1.1_chr3 67328469 67333865 -
n.a. Protein lateral root primordium 1; TAIR: AT2G18120.2 SHI-related sequence 4; Swiss-Prot: sp|Q9SI19|SRS4_ARATH Protein SHI RELATED SEQUENCE 4; TrEMBL-Plants: tr|Q70I38|Q70I38_LOTJA CM0216.460.nc protein; Found in the gene: LotjaGi3g1v0512900 LjG1.1_chr3 92967199 92969851 -
n.a. Protein SHI RELATED SEQUENCE 1; TAIR: AT5G66350.1 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q9XGX0|SHI_ARATH Protein SHORT INTERNODES; TrEMBL-Plants: tr|V7CD60|V7CD60_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0123100 LjG1.1_chr4 17759428 17764813 -
n.a. Protein shi related sequence 1; TAIR: AT1G75520.1 SHI-related sequence 5; Swiss-Prot: sp|Q9LQZ5|SRS5_ARATH Protein SHI RELATED SEQUENCE 5; TrEMBL-Plants: tr|I1MY05|I1MY05_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0010600 LjG1.1_chr5 2500665 2503759 -
n.a. Lateral root primordium 1; TAIR: AT5G12330.4 Lateral root primordium (LRP) protein-like protein; Swiss-Prot: sp|Q94CK9|LRP1_ARATH Protein LATERAL ROOT PRIMORDIUM 1; TrEMBL-Plants: tr|V7B6F1|V7B6F1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0180800 LjG1.1_chr6 47247836 47250684 -