Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0067549.2

Overview

Field Value
Gene ID Lj0g3v0067549
Transcript ID Lj0g3v0067549.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 3 3
SignalP 1 17 17
Phobius 1 23 23
Phobius 4 15 12
TMHMM 4 21 18
PANTHER 8 583 576 1.80E-279
PANTHER 8 583 576 1.80E-279
Phobius 16 23 8
SUPERFAMILY 24 206 183 3.78E-37
Phobius 24 239 216
Pfam 26 63 38 4.70E-09
Gene3D 27 189 163 1.70E-42
TMHMM 240 262 23
Phobius 240 263 24
Gene3D 255 390 136 3.50E-18
Phobius 264 602 339
SUPERFAMILY 300 584 285 2.70E-75
SMART 315 588 274 1.70E-37
ProSiteProfiles 315 588 274 39.227
Pfam 318 581 264 6.80E-48
ProSitePatterns 321 343 23
Gene3D 391 586 196 9.00E-45
ProSitePatterns 435 447 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj0g3v0067549.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0067549.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.