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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011583
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.939s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0284689.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-6-like [Fragaria vesca subsp]. vesca] gi|470104631|ref|XP_004288701.1| chr0 147733013 147737647 +
2 domain predictions
1 GO term
Lj0g3v0362579.1
n.a. PREDICTED: chitotriosidase-1-like [Glycine max] gi|356556606|ref|XP_003546615.1| chr0 191211338 191213015 +
2 domain predictions
1 GO term
Lj1g3v0177800.1
n.a. n.a. chr1 2016278 2017990 -
2 domain predictions
1 GO term
Lj1g3v0177810.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] gi|359497026|ref|XP_003635401.1| chr1 2016830 2021310 +
2 domain predictions
1 GO term
Lj1g3v3918170.2
n.a. PREDICTED: chitinase domain-containing protein 1-like isoform X1 [Cicer arietinum] gi|502161879|ref|XP_004512315.1| chr1 45777800 45782753 -
2 domain predictions
1 GO term
Lj5g3v0525250.1
n.a. PREDICTED: chitotriosidase-1-like [Cicer arietinum] gi|502125066|ref|XP_004498784.1| chr5 5524517 5525463 +
2 domain predictions
1 GO term
Lj5g3v0525260.1
n.a. PREDICTED: acidic mammalian chitinase-like [Glycine max] gi|356563922|ref|XP_003550206.1| chr5 5524790 5531765 +
2 domain predictions
1 GO term
Lj6g3v1078650.1
n.a. PREDICTED: acidic mammalian chitinase-like [Cicer arietinum] gi|502131776|ref|XP_004501097.1| chr6 12960356 12961885 +
2 domain predictions
1 GO term
Lj6g3v1078660.1
n.a. n.a. chr6 12960356 12965800 -
2 domain predictions
1 GO term
LotjaGi1g1v0635600.1
n.a. Chitinase domain-containing protein 1; TAIR: AT4G01040.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q66IL0|CHID1_XENTR Chitinase domain-containing protein 1; TrEMBL-Plants: tr|G7K407|G7K407_MEDTR Glycoside hydrolase family 18 protein; Found in the gene: LotjaGi1g1v0635600 LjG1.1_chr1 119044691 119049941 -
2 domain predictions
1 GO term
LotjaGi4g1v0284200.1
n.a. Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase; TrEMBL-Plants: tr|A0A1B1J8W5|A0A1B1J8W5_MEDTR Class V chitinase b protein; Found in the gene: LotjaGi4g1v0284200 LjG1.1_chr4 65643579 65645515 -
2 domain predictions
1 GO term
LotjaGi4g1v0284300.1
n.a. Receptor protein kinase, putative; TAIR: AT4G23200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 12; Swiss-Prot: sp|O65472|CRK12_ARATH Putative cysteine-rich receptor-like protein kinase 12; TrEMBL-Plants: tr|A0A072US50|A0A072US50_MEDTR Cysteine-rich RLK (Receptor-like kinase) protein; Found in the gene: LotjaGi4g1v0284300 LjG1.1_chr4 65649702 65654364 -
2 domain predictions
1 GO term
LotjaGi4g1v0284600.1
n.a. Receptor protein kinase, putative; TAIR: AT1G11330.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330; TrEMBL-Plants: tr|A0A151QSL2|A0A151QSL2_CAJCA Cysteine-rich receptor-like protein kinase 10; Found in the gene: LotjaGi4g1v0284600 LjG1.1_chr4 65682594 65687956 -
2 domain predictions
1 GO term
LotjaGi4g1v0284700.1
n.a. Chitinase, putative; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q13231|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr|A0A1J7GHK5|A0A1J7GHK5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0284700 LjG1.1_chr4 65699065 65702704 -
2 domain predictions
1 GO term
LotjaGi5g1v0054800.1
n.a. Chitinase, putative; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q13231|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr|A0A1B1J8Z2|A0A1B1J8Z2_LOTJA Class V chitinase protein; Found in the gene: LotjaGi5g1v0054800 LjG1.1_chr5 9317459 9323095 +
2 domain predictions
1 GO term
LotjaGi5g1v0055200.1
n.a. Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q9W5U2|CHIT3_DROME Probable chitinase 3; TrEMBL-Plants: tr|A0A1B1J8Z2|A0A1B1J8Z2_LOTJA Class V chitinase protein; Found in the gene: LotjaGi5g1v0055200 LjG1.1_chr5 9369386 9372829 -
2 domain predictions
1 GO term
LotjaGi6g1v0206300.1
n.a. Chitinase; TAIR: AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein; Swiss-Prot: sp|Q13231|CHIT1_HUMAN Chitotriosidase-1; TrEMBL-Plants: tr|I3S8H4|I3S8H4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0206300 LjG1.1_chr6 50332508 50338560 +
2 domain predictions
1 GO term