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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0177800 |
| Transcript ID | Lj1g3v0177800.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| PANTHER | 7 | 369 | 363 | 1.30E-119 | – | |
| PANTHER | 7 | 369 | 363 | 1.30E-119 | – | |
| Phobius | 17 | 21 | 5 | – | – | |
| Phobius | 22 | 375 | 354 | – | – | |
| SMART | 31 | 358 | 328 | 1.00E-66 | ||
| SUPERFAMILY | 32 | 272 | 241 | 2.11E-56 | ||
| Pfam | 34 | 358 | 325 | 3.30E-64 | ||
| Gene3D | 35 | 266 | 232 | 4.10E-60 | ||
| SUPERFAMILY | 264 | 329 | 66 | 3.82E-08 | ||
| Gene3D | 267 | 329 | 63 | 4.90E-08 | ||
| Gene3D | 338 | 367 | 30 | 4.10E-60 | ||
| SUPERFAMILY | 338 | 367 | 30 | 2.11E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Chitin binding | Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues. |
Expression pattern of Lj1g3v0177800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0177800.1, powered by CORGI.
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