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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013765
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.143s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4226710.1
n.a. PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502108338|ref|XP_004493447.1| chr1 49813115 49819522 -
3 domain predictions
3 GO terms
Lj1g3v4226710.2
n.a. PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502108338|ref|XP_004493447.1| chr1 49813115 49819522 -
3 domain predictions
3 GO terms
Lj3g3v0422710.1
n.a. PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like [Glycine max] gi|356556644|ref|XP_003546633.1| chr3 3686263 3689944 +
3 domain predictions
3 GO terms
Lj3g3v0422710.2
n.a. PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like [Solanum lycopersicum] gi|460396872|ref|XP_004243994.1| chr3 3687888 3689944 +
3 domain predictions
3 GO terms
Lj4g3v2172560.1
n.a. PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Cicer arietinum] gi|502150423|ref|XP_004507946.1| chr4 29857961 29861579 -
5 domain predictions
3 GO terms
Lj4g3v2172570.1
n.a. PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like [Glycine max] gi|356561937|ref|XP_003549233.1| chr4 29861695 29863255 -
3 domain predictions
3 GO terms
Lj6g3v1239560.1
n.a. RecA [Medicago truncatula] gi|357449857|ref|XP_003595205.1| chr6 15321183 15326898 +
6 domain predictions
3 GO terms
LotjaGi1g1v0669500.1
n.a. RecA; TAIR: AT3G10140.1 RECA homolog 3; Swiss-Prot: sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial; TrEMBL-Plants: tr|G7KSL4|G7KSL4_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi1g1v0669500 LjG1.1_chr1 123226970 123233711 -
3 domain predictions
3 GO terms
LotjaGi1g1v0669500.2
n.a. RecA; TAIR: AT3G10140.1 RECA homolog 3; Swiss-Prot: sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial; TrEMBL-Plants: tr|G7KSL4|G7KSL4_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi1g1v0669500 LjG1.1_chr1 123226970 123233711 -
3 domain predictions
3 GO terms
LotjaGi3g1v0037500.1
n.a. Protein recA; TAIR: AT1G79050.1 recA DNA recombination family protein; Swiss-Prot: sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic; TrEMBL-Plants: tr|V7AKD7|V7AKD7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0037500 LjG1.1_chr3 4059006 4075352 -
7 domain predictions
3 GO terms
LotjaGi3g1v0037500.2
n.a. Protein recA; TAIR: AT1G79050.1 recA DNA recombination family protein; Swiss-Prot: sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0G3Y7|A0A0R0G3Y7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0037500 LjG1.1_chr3 4060967 4075232 -
6 domain predictions
3 GO terms
LotjaGi4g1v0310500.1
n.a. RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A151SS31|A0A151SS31_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0310500 LjG1.1_chr4 68671791 68678503 -
5 domain predictions
3 GO terms
LotjaGi4g1v0310500.2
n.a. RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A151SS31|A0A151SS31_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0310500 LjG1.1_chr4 68671960 68678425 -
5 domain predictions
3 GO terms
LotjaGi4g1v0310500.3
n.a. RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|A0A072V2Z1|A0A072V2Z1_MEDTR DNA repair protein RecA, putative; Found in the gene: LotjaGi4g1v0310500 LjG1.1_chr4 68672468 68677000 -
5 domain predictions
3 GO terms
LotjaGi6g1v0230700.1
n.a. RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700 LjG1.1_chr6 53940055 53946043 +
5 domain predictions
3 GO terms
LotjaGi6g1v0230700.2
n.a. RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700 LjG1.1_chr6 53940954 53945429 +
5 domain predictions
3 GO terms
LotjaGi6g1v0230700.3
n.a. RecA family protein; TAIR: AT2G19490.1 recA DNA recombination family protein; Swiss-Prot: sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial; TrEMBL-Plants: tr|G7IIL3|G7IIL3_MEDTR DNA repair and recombination protein; Found in the gene: LotjaGi6g1v0230700 LjG1.1_chr6 53941253 53945429 +
5 domain predictions
3 GO terms