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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016679
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.364s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2069900.1
n.a. PREDICTED: GATA transcription factor 12-like [Cicer arietinum] gi|502131913|ref|XP_004501147.1| chr1 24561214 24563394 -
2 domain predictions
3 GO terms
Lj3g3v2315420.3
n.a. PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 9-like [Glycine max] gi|356526093|ref|XP_003531654.1| chr3 28334367 28335829 -
2 domain predictions
3 GO terms
Lj3g3v3386580.1
n.a. GATA transcription factor [Medicago truncatula] gi|357473525|ref|XP_003607047.1| chr3 41777857 41779293 +
2 domain predictions
3 GO terms
Lj4g3v1010080.1
n.a. PREDICTED: GATA transcription factor 5-like [Cicer arietinum] gi|502153411|ref|XP_004509331.1| chr4 14539456 14541137 +
2 domain predictions
3 GO terms
Lj5g3v1811810.1
n.a. PREDICTED: GATA transcription factor 8-like isoform X1 [Cicer arietinum] gi|502118446|ref|XP_004496271.1| chr5 25979395 25983440 +
2 domain predictions
3 GO terms
LotjaGi1g1v0406400.1
n.a. GATA transcription factor; TAIR: AT4G32890.1 GATA transcription factor 9; Swiss-Prot: sp|O82632|GATA9_ARATH GATA transcription factor 9; TrEMBL-Plants: tr|V7AUH9|V7AUH9_PHAVU GATA transcription factor; Found in the gene: LotjaGi1g1v0406400 LjG1.1_chr1 89521904 89524386 -
2 domain predictions
3 GO terms
LotjaGi1g1v0563800.1
n.a. GATA transcription factor; TAIR: AT4G36240.1 GATA transcription factor 7; Swiss-Prot: sp|O65515|GATA7_ARATH GATA transcription factor 7; TrEMBL-Plants: tr|I1K730|I1K730_SOYBN GATA transcription factor; Found in the gene: LotjaGi1g1v0563800 LjG1.1_chr1 109686971 109689433 -
2 domain predictions
3 GO terms
LotjaGi2g1v0384600.1
n.a. GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|I1J8P1|I1J8P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0384600 LjG1.1_chr2 88099015 88100992 -
2 domain predictions
3 GO terms
LotjaGi2g1v0384600.2
n.a. GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|A0A0R0LC16|A0A0R0LC16_SOYBN GATA transcription factor; Found in the gene: LotjaGi2g1v0384600 LjG1.1_chr2 88099203 88100993 -
2 domain predictions
3 GO terms
LotjaGi3g1v0514000.1
n.a. GATA transcription factor; TAIR: AT3G51080.1 GATA transcription factor 6; Swiss-Prot: sp|Q9SD38|GATA6_ARATH GATA transcription factor 6; TrEMBL-Plants: tr|A0A151RII0|A0A151RII0_CAJCA GATA transcription factor; Found in the gene: LotjaGi3g1v0514000 LjG1.1_chr3 93123797 93126072 +
2 domain predictions
3 GO terms
LotjaGi4g1v0124800.1
n.a. GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|A0A061DFE1|A0A061DFE1_THECC GATA transcription factor 5, putative; Found in the gene: LotjaGi4g1v0124800 LjG1.1_chr4 18161137 18163018 +
2 domain predictions
3 GO terms
LotjaGi4g1v0124800.2
n.a. GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|A0A061DFE1|A0A061DFE1_THECC GATA transcription factor 5, putative; Found in the gene: LotjaGi4g1v0124800 LjG1.1_chr4 18161190 18162911 +
2 domain predictions
3 GO terms
LotjaGi5g1v0274000.1
n.a. GATA transcription factor; TAIR: AT4G32890.1 GATA transcription factor 9; Swiss-Prot: sp|O82632|GATA9_ARATH GATA transcription factor 9; TrEMBL-Plants: tr|A0A151SE25|A0A151SE25_CAJCA GATA transcription factor; Found in the gene: LotjaGi5g1v0274000 LjG1.1_chr5 58758071 58762496 +
2 domain predictions
3 GO terms
LotjaGi5g1v0274000.2
n.a. GATA transcription factor; TAIR: AT4G32890.1 GATA transcription factor 9; Swiss-Prot: sp|O82632|GATA9_ARATH GATA transcription factor 9; TrEMBL-Plants: tr|A0A151SE25|A0A151SE25_CAJCA GATA transcription factor; Found in the gene: LotjaGi5g1v0274000 LjG1.1_chr5 58758101 58762812 +
2 domain predictions
3 GO terms