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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
Biological process | Positive regulation of transcription, DNA-templated | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: GATA transcription factor 12-like [Cicer arietinum] gi|502131913|ref|XP_004501147.1| | 15 | ||
– | PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 9-like [Glycine max] gi|356526093|ref|XP_003531654.1| | 15 | ||
– | GATA transcription factor [Medicago truncatula] gi|357473525|ref|XP_003607047.1| | 14 | ||
– | PREDICTED: GATA transcription factor 5-like [Cicer arietinum] gi|502153411|ref|XP_004509331.1| | 14 | ||
– | PREDICTED: GATA transcription factor 8-like isoform X1 [Cicer arietinum] gi|502118446|ref|XP_004496271.1| | 14 | ||
– | GATA transcription factor; TAIR: AT4G32890.1 GATA transcription factor 9; Swiss-Prot: sp|O82632|GATA9_ARATH GATA transcription factor 9; TrEMBL-Plants: tr|V7AUH9|V7AUH9_PHAVU GATA transcription factor; Found in the gene: LotjaGi1g1v0406400 | 15 | ||
– | GATA transcription factor; TAIR: AT4G36240.1 GATA transcription factor 7; Swiss-Prot: sp|O65515|GATA7_ARATH GATA transcription factor 7; TrEMBL-Plants: tr|I1K730|I1K730_SOYBN GATA transcription factor; Found in the gene: LotjaGi1g1v0563800 | 15 | ||
– | GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|I1J8P1|I1J8P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0384600 | 14 | ||
– | GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|A0A0R0LC16|A0A0R0LC16_SOYBN GATA transcription factor; Found in the gene: LotjaGi2g1v0384600 | 14 | ||
– | GATA transcription factor; TAIR: AT3G51080.1 GATA transcription factor 6; Swiss-Prot: sp|Q9SD38|GATA6_ARATH GATA transcription factor 6; TrEMBL-Plants: tr|A0A151RII0|A0A151RII0_CAJCA GATA transcription factor; Found in the gene: LotjaGi3g1v0514000 | 14 | ||
– | GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|A0A061DFE1|A0A061DFE1_THECC GATA transcription factor 5, putative; Found in the gene: LotjaGi4g1v0124800 | 14 | ||
– | GATA transcription factor; TAIR: AT5G66320.1 GATA transcription factor 5; Swiss-Prot: sp|Q9FH57|GATA5_ARATH GATA transcription factor 5; TrEMBL-Plants: tr|A0A061DFE1|A0A061DFE1_THECC GATA transcription factor 5, putative; Found in the gene: LotjaGi4g1v0124800 | 14 | ||
– | GATA transcription factor; TAIR: AT4G32890.1 GATA transcription factor 9; Swiss-Prot: sp|O82632|GATA9_ARATH GATA transcription factor 9; TrEMBL-Plants: tr|A0A151SE25|A0A151SE25_CAJCA GATA transcription factor; Found in the gene: LotjaGi5g1v0274000 | 14 | ||
– | GATA transcription factor; TAIR: AT4G32890.1 GATA transcription factor 9; Swiss-Prot: sp|O82632|GATA9_ARATH GATA transcription factor 9; TrEMBL-Plants: tr|A0A151SE25|A0A151SE25_CAJCA GATA transcription factor; Found in the gene: LotjaGi5g1v0274000 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 7.14 |