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LotjaGi1g1v0364300.6

Overview

Field Value
Gene ID LotjaGi1g1v0364300
Transcript ID LotjaGi1g1v0364300.6
Related isoforms 7
Lotus japonicus genome version Gifu v1.2
Description Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:84029778..84034768) extracted from Lotus japonicus Gifu genome v1.2.

ATGATTCAAAGAACCTCACAGTTTCCATGTTTAAGGAAATTGCTTCTTCGAGCTGGTTATCCCTCTTCTTCCTCCAAGGT GACAAGATCGATTTTGGTACTTTTTCTTGTGCGTTTTTTTTTCCATCGGTGATATGCATGTAAGCTGTATTTTGTTTTAA AAGCTAGCTTTCATGTCTGCTTGCTTCTTTGGTATGTCTAGAAGAAGAAAATCTTGATTCACAAATTAAAATGACTTATC TGTTCAATTTTTTAGTATATTGTAGATAATATGTACTAATTAAAATTAGTAGTAAAAACATGCATGAATCAGTTTTTAAC ACAGCACACCATAAAATTGCACTTTAATTGTGAAAATACATGTGGGTCAGAGAGTGAAAAAAAAAAAACATAAATTTCAG TACATATAATTCATCTTTCATTAATTATATGAAAACATTTTACTGCTTCATTTTTCTTTTTAATAAGGCTTAATTGCACT TTTGGTCCCCCAACTATGGCCTTCCTGCGAAAATCGTCCCTAAACTTCAAAATTAGCAAAACTCGTCCCTCAACTATACA CACAGTTGCACTTTTGGTCTTCCGTTAGCATTCCGTCAGAAATCTAACAGATTGGGACTAGTGACGGAGATAATCCGTCA CAATTCACAATCCAGTCACCAAATTTCTTCATCTTCCTCAATATAACCACCACTCATCCTCCCCCTCCTCATTCCTCACT TTCTCCATCTTCATCAACCTCAATCCCTCATCCTCCCCTCCCTTCTCCTTTCATTCCTCTTCACCACTACCTCCCTCAAC CATCAACACAAACTCTCCATACTGAAATTGAATTGGAGCGGATTGCTGGAGAGAAAGGGGTTTTGGGTTTTTCTTCAACA CTCTTTGCAGATCCCATTTTCTCATCTCCTCATGAAATTAGAAATCCATTTCACAACCCAAAAGAAGGAGTTGCAGACCT CTCCCTCCATATCTTCATCTCATCTTTCTCACTCGCACCTCTCCCTCCACCGAACCCACACCAGCAAACCACAACCCAGA ACCACCTCTCCCTCCACCAACCCCACCCCTCCCCAGAAACCCAACCGGAACCCACCCCAAACCCCACCCAGAAACTGAGC CCACAAACCCCTTCTTCCCTCTCACAATAGATCTACCATAACTGAGAAAGGAAAACCAGAGAAGAAAATCCAAGACTTTT TTTTTTTCAGATCTCAAACCATTGTTACAGATACAGCTTCAACCTATCATATGGTGTCTCGAGAGGGGGAGCTCGAAGCT TGTAACCCAGAAACCCGACCAAAAACCCAGAAACTTTGAAGCTTTGAACGAGAACCATGATCTACAGAAGAGGAGGAGGA AGAGGAAACGGATTTAAGTGAGCTTCTTTATTTTTTCAATTAAAATACTATTTTTTCTCAATTTTATTTTTTCTTTATTT TTTAATTCATTTTTAACGGAATATTCTGTTAGTTTTCTGACGGAATGCTAACGGAAGACCAAAAGTGCAACTGTGTGTAT AGTTGAGGGACGAGTTTTGCTAATTTTGAAGTTTAGGGACAATTTTCGCAGGAAGGCCATAGTTGGGGGACCAAAAGTGC AATTAAGCCTTTTAATAAGGATAAAATATTAAGTATCCATTTTAGTTTGTTGGGGCTTGTACGATTAAATAAAGGAAATT AAATATTCCGGATCATTTATAGTCAACAATATAACAAAGATCATGTGATAGCAGATGGGGACTTACAACAGCTATGCATC TCAACCCTCCCCTCTTGAAATCCCAGACCAAAGTTACAGGTGAGTTAATTATTACTCCTTCCATTAAGTATTGACAGTAA GAAAATTTTAAGGGGTTAACGTGTATTAGAACAACAGTTAACTTGTCTTTTAAGGGGTTAAGTTGTTATTGTTCTGCATT TTGACAAAAATCTAGTGATGATGAATATGCCAATGTTGATTGGGACAACCTTGGATTTGGACTGATGCCAACTGATTACA TGTACGTTGATAAATGCTACGCTGGTAAGAATTTTGTACGAGGACAACTCACTCGTTATGGAAACATTGAACTTAGCCCA TCAGCTGGGGTCCTAAATTATGGTCAGGTACGATGTGTCCAAAAATACTTAATACCCGTTTGGATGGAAATTAAAGAATA ATTAATAAGTGATTGTCTTCATCCCTGAAATGTGAAATTTAGGGATTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAA TGGGCGATTGCTGCTCTTCCGTCCAGAGGAAAATGCCATCCGCATGAAGATTGGCGCCGAGAGAATGTGCATGCAATCCC CTTCAATCGATCAATTCGTCGATGCTCTCAAGCAAACTGCACTTGCAAACAAGCGTTGGGTAAGATCATCCTAAACTAAA TCAATGCATTTCAATGATTTCGTGTTACATTTGAATTTCCTCACACAATTGATGTAAACCCTTATCAGATTCCTCCACCG GGTAAAGGATCATTGTATATGAGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTTGGGTTTGGCTCCTGCACCTGAATACAC TTTCCTTGTATATGCTTCCCCTGTTCGTAACTATTTCAAGGTTAGTGATACTTCGTTTGATTTTTCATTTTTCCTCACTT GAATTTACTTCAAAACTTCAATCTTGCTTCTTTAATTTGTACCCACCACAGGAGGGTTCCGCGCCGCTTAGCTTGTTCGT GGAGGAGGATTTTGACCGTGCTTCTCGCCGCGGCACCGGGAGTGTTAAAACCATTTCTAATTATGCTCCGGTAAGCATTT TTATGTCTTTCAGTTTTTCACTGAAACCAAACAAAACAATATTATTATCCTCTGTGTAAATTAAACATTAGTACAATATG CAATGGTTTAGTTTTTGTTCATTTTTATTTTTTTTAGCTGGGAAATCTTCGTTTATGCAAGCTTATCTTATTTGTTGGTG ACAGTTTTCCCCAATTTCTTTGACTGTTATTTTTTTTTTCATCACTATCATGTGATTTAGCGTGCGTGTATTTTGAATTC ATATGATATCATATCAGTAAATGATATGTAAAGTATATGAATTTGGACAAAAATGTAAAAGGGATATTGGAGTATTCAAT TGTACCACTTGTCTTGACGTGTAGGTCTTAATGGCACAACTTAGAGCCAAGAACAGAGGATTTTCGGATGTGCTATACCT TGATTCAGAGACCAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGTACTATTCTTGTAGCATT TTTTCTTTTCAAGCATGTTGCAATGCCGCATATGATGAGTGGCGAGAAACAACAAAAGAAAAATGTACACCAAGTTAAAA CTAGTGTTGTAAGCTAATGAAGGCATACATGAGTCTTTCAAAACTGCAATTCCAGAACTATAAGTTACGATTTAATGCTA GAAATTACAGAAAACTGATTAAAATATGTAAGTAGATGTCATCAAAAGTTTTGGAGACTTTGCATGTAAGCAGGGATTGG AATGAATGGGAGGTATTCTCGATATTTGATAGATCATATGATATGGGCAAACATACAACCTAAGATATTAAAAACATAAG GTTGTGTTAGAGAACAGAATTTTAGACAATTGCAGTTAAGTTGAATTGTTTACCTTCCCGTTTGCGCATGTTACCAAACA ATTTAGTGAAATTGTCAACTACATTCACTTGCAACTGGCCAATCTAATTTGTTTTCTAATCTCATAGGGCAAATGCATCT CAACACCTGCTACCAATGGAACCATACTTGCCGGAATCACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTCGGCTAT CAGGTAAGAATATATAATAAGTACTTTTGGCTCCTACATTCAATATTTTGTGCTTGTGTTTGGATACTAATTGAGGGCAA TGTGAATAGACTTCTGAAGCTAATGGATTATGGATATCGCAGCATATTGTTTCTGGCTTTTTGAATTCATGATTAGTCTT TCTCACAGACAGTAAAAATTTGAGTAGTCATTCGTTAAGTTTGTTTAAACTACACCAGTTATTGTTAATTAGTTTATATT TTTCTGTTGTTGAAGTTTTCAGCAAATTAAACTCGTATAATCCATTAGTATTGTCTTCTACAGCAACAACAAAAGACTTA TCCTACTCAGTGTAGTATTGTCTTCTAAACCAGTAAAAATAGAAAAATAAATAGGAACACTATAATCTTAAAAAAAGAAA GTCAATACAATTTACATTAAAGTAGTCTTACAAGTTCAAGGAAAACAAATGTTTGAAGTTCAGATCATAGAGTTGATCAT ATTGGAGCTTTGTGTATTATTTTTCTCTTTCAAATATGCTTACTGCATGACCAAATTTGTTCAGGTGGAAGAGCATGCTG TAAACGTGGATGAATTGATGGAGGCTGATGAAGTATTCTGCACAGGAACTGCTGTTGGTGTTGCCCCTGTAGGGAGTATC ACATACCAGGACAGAAGGTAATAGTAACTTACATATATAAGAATATTACTTATGTTTTTAGAAAAGAAAAGCTAATTTCT TCTTCGATCATGTATAAACCAGGGTTGTTAATGGCGGATAGCGTAGTGTAGCGGCAAGCCCAAAAAACGCTATTTCAAGC GCTATTGCGGCGCTATAGCGGCAAATAACGCAAATAGCGGTGAATAGTGGAGTAGCGGTGAACCCCCAGGGCGCTACGCT ATAGGCTATTGCGCCGCTATAACGTGCTATTAACAAGCCTGATAAAAACTATATAAAACTTCCTCTCTAGATTACAAATC TTAACTATTTTATTTAACAGGTATAAATGCATCATATCAGTCTAAAATTTGCTGAAATATTGTTATATATCTGCAGGGCG GAATATAAAACAGGTTCCGGAACCATTTGTCAAGAGTTGTACAAAACTATATCAGGAATTCAAACGGGTACTATTGAAGA TAAGAAGGGGTGGATTGTTGAAATTGATTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0364300.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTCAAAGAACCTCACAGTTTCCATGTTTAAGGAAATTGCTTCTTCGAGCTGGTTATCCCTCTTCTTCCTCCAAGCA GATGGGGACTTACAACAGCTATGCATCTCAACCCTCCCCTCTTGAAATCCCAGACCAAAGTTACAGTGATGATGAATATG CCAATGTTGATTGGGACAACCTTGGATTTGGACTGATGCCAACTGATTACATGTACGTTGATAAATGCTACGCTGGTAAG AATTTTGTACGAGGACAACTCACTCGTTATGGAAACATTGAACTTAGCCCATCAGCTGGGGTCCTAAATTATGGTCAGGG ATTGTTTGAAGGCACGAAAGCATGCAGAAGCGAAAATGGGCGATTGCTGCTCTTCCGTCCAGAGGAAAATGCCATCCGCA TGAAGATTGGCGCCGAGAGAATGTGCATGCAATCCCCTTCAATCGATCAATTCGTCGATGCTCTCAAGCAAACTGCACTT GCAAACAAGCGTTGGATTCCTCCACCGGGTAAAGGATCATTGTATATGAGGCCTCTCCTCTTAGGAAGTGGTCCAGTTTT GGGTTTGGCTCCTGCACCTGAATACACTTTCCTTGTATATGCTTCCCCTGTTCGTAACTATTTCAAGGAGGGTTCCGCGC CGCTTAGCTTGTTCGTGGAGGAGGATTTTGACCGTGCTTCTCGCCGCGGCACCGGGAGTGTTAAAACCATTTCTAATTAT GCTCCGGTCTTAATGGCACAACTTAGAGCCAAGAACAGAGGATTTTCGGATGTGCTATACCTTGATTCAGAGACCAAGAA AAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACCAATGGAACCA TACTTGCCGGAATCACCAGAAAAAGTGTAATTGAAATTGCTGGTGATCTCGGCTATCAGGTGGAAGAGCATGCTGTAAAC GTGGATGAATTGATGGAGGCTGATGAAGTATTCTGCACAGGAACTGCTGTTGGTGTTGCCCCTGTAGGGAGTATCACATA CCAGGACAGAAGGGCGGAATATAAAACAGGTTCCGGAACCATTTGTCAAGAGTTGTACAAAACTATATCAGGAATTCAAA CGGGTACTATTGAAGATAAGAAGGGGTGGATTGTTGAAATTGATTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0364300.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIQRTSQFPCLRKLLLRAGYPSSSSKQMGTYNSYASQPSPLEIPDQSYSDDEYANVDWDNLGFGLMPTDYMYVDKCYAGK NFVRGQLTRYGNIELSPSAGVLNYGQGLFEGTKACRSENGRLLLFRPEENAIRMKIGAERMCMQSPSIDQFVDALKQTAL ANKRWIPPPGKGSLYMRPLLLGSGPVLGLAPAPEYTFLVYASPVRNYFKEGSAPLSLFVEEDFDRASRRGTGSVKTISNY APVLMAQLRAKNRGFSDVLYLDSETKKNLEEVSSCNIFIAKGKCISTPATNGTILAGITRKSVIEIAGDLGYQVEEHAVN VDELMEADEVFCTGTAVGVAPVGSITYQDRRAEYKTGSGTICQELYKTISGIQTGTIEDKKGWIVEID
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR42825:SF5
19 388 370 2.4E-209 –
PANTHER
PTHR42825
19 388 370 2.4E-209 –
MobiDBLite
mobidb-lite
22 46 25 - –
MobiDBLite
mobidb-lite
22 44 23 - –
PIRSF
PIRSF006468
38 388 351 9.6E-111
IPR005786
Gene3D
G3DSA:3.30.470.10
39 215 177 7.1E-58
IPR043131
SUPERFAMILY
SSF56752
48 384 337 1.1E-99
IPR036038
TIGRFAM
TIGR01123
84 387 304 1.5E-93
IPR005786
CDD
cd01557
94 375 282 5.2716E-120
IPR033939
Pfam
PF01063
107 345 239 2.3E-39
IPR001544
Gene3D
G3DSA:3.20.10.10
216 388 173 9.9E-60
IPR043132
ProSitePatterns
PS00770
271 300 30 -
IPR018300

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004084
Molecular function Branched-chain-amino-acid transaminase activity Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid.
Subterm of
GO:0009081
Biological process Branched-chain amino acid metabolic process The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0364300.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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