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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024599
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.563s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v5020940.1
n.a. PREDICTED: retinoblastoma-related protein 1-like [Glycine max] gi|356556778|ref|XP_003546699.1| chr1 61179197 61187242 +
3 domain predictions
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Lj3g3v1896330.1
n.a. PREDICTED: retinoblastoma-related protein 1-like [Glycine max] gi|356556778|ref|XP_003546699.1| chr3 24322898 24330154 +
3 domain predictions
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LotjaGi1g1v0787400.1
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0787400 LjG1.1_chr1 136010688 136019329 +
3 domain predictions
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LotjaGi1g1v0787400.2
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.1 retinoblastoma-related 1; Swiss-Prot: sp|A9UL14|RBR_MEDSA Retinoblastoma-related protein; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0787400 LjG1.1_chr1 136010725 136018905 +
3 domain predictions
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LotjaGi1g1v0787400.3
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0787400 LjG1.1_chr1 136010725 136018905 +
3 domain predictions
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LotjaGi1g1v0787400.4
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0787400 LjG1.1_chr1 136012286 136018563 +
3 domain predictions
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LotjaGi1g1v0787400.5
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|A0A0R0GFY6|A0A0R0GFY6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0787400 LjG1.1_chr1 136012479 136018563 +
3 domain predictions
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LotjaGi3g1v0315700.1
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 LjG1.1_chr3 66862534 66870206 +
3 domain predictions
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LotjaGi3g1v0315700.2
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 LjG1.1_chr3 66864230 66869676 +
3 domain predictions
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LotjaGi3g1v0315700.3
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 LjG1.1_chr3 66864252 66869676 +
3 domain predictions
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LotjaGi3g1v0315700.4
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 LjG1.1_chr3 66864690 66869676 +
3 domain predictions
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LotjaGi3g1v0315700.5
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 LjG1.1_chr3 66864701 66869676 +
3 domain predictions
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LotjaGi3g1v0315700.6
n.a. Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|A0A0R0GFY6|A0A0R0GFY6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 LjG1.1_chr3 66864714 66869676 +
3 domain predictions
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