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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0315700 |
| Transcript ID | LotjaGi3g1v0315700.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Retinoblastoma-related protein; TAIR: AT3G12280.2 retinoblastoma-related 1; Swiss-Prot: sp|Q9SLZ4|RBR1_PEA Retinoblastoma-related protein 1; TrEMBL-Plants: tr|I1MIM1|I1MIM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66862534..66870206) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATAAAAAGTACACACCAAACCAAACAAAACAGAATTACTGCGTTTCTCTCTCTTTCTCTCTCTTCAGCTGCTTCTT CTTCTTCTTCTTCTTCTTCTCAGCTCTGTTTCCTCGATCTCTCTAGGGTTCTGTTGATTCAACACCATCATCGTGGTTCC TCATTGCAATTCACCGACCTTCCTGGGCGAATTCATCTCCCTCTTCGCACGATCTGCGCCAATTAGGGTTCTTGCATGAG TCCTCCAGCTGCAGCTGACATGGAAGATGTCAAGCCTTCTGTTGATAATGCCGACCAAGCTGACTCCCGCTTCGCTGACT TTTGCAAGGTTCAGTCTTTTCCATCTGTTCTATGTGAAATTTTATCTGTTACTGAATTTTTGTTCTTGTGAGATTTTTTT CTGGTGTTTTTATGTTGTTGTAATTGTGTGTAGGGCTTGTTTCTAGTGATTTTTGTGGATAAAGTTATGATCTTTATGTT TTTTGGTTAGTGGGTATAGATGTAAACGAAGCCATGTGATACACTCCCCTTAACCCTAGTTGAATTTCCATTTTTTTGAG AGGCATAGGAGGATGCCACTGACATTATTTTTATTGATTAAAAAATTAATCTTTTCAGAAGGTTAGATGAAAAATTTTAG TGATATGGGTGAAGTAGTATTTTATTCCTCATCTGGGTCATCTTTCACATCCTGATATATGATAAAGGATCAAGTTTAAT TTTTTTTCACTGGGGCAAGGCTAGAAGAATATTTTTGGAGACAGTAGGTGGGAGGTGGGAACGCCGGTGATGAGCCCAGC ATGAATGAAGAAAGTCCAGAGAGCAATGAATTCACCGACCCTATTTGAGTTATTATTTTAAAGGAGAGGAATGCGCTAAT ATCGACAACTGTTTTAACCAAATCTTTCCATTAAATGATTTGTCGGTTTGTTATGATATGACGCGTTGTGTTTAATGGTT ATTTGCTGTATTTGATGGGTTGAGTTACCGCGTCATTTGCACGTGTTGGAGCTATAGCACATTACTTGCAAAGAAAGTTT TGGGGAACTCACTGTTCTTGTGACATTGGTTACATATTCACGGCTGATGTGGGCCGGGAAGTGCTCAAATGCGCACACTA AAATTAGGGGAGCTAGCCACTCAACTTTTCAAATACATTTAGTAACCGTTAAACACAATGCACCATATTATAACAAAACG ACAAATCATTTAATGGAATTTTTTTGTCTAAACATTTGTAATTATCAGCACATTCATTTGTTTTTAAATAATAACTCAAC AAGGTTGGTTGTTTCATTGCTCAGTGGACTTTCTTCATTAATGTTTGACTCATTACCCGTGTGGATGACTTTGGTGGAGC ATACCAGCTGTTGGCGATGACCGGAAACTCATTGCTTTGCGCAAATTGCGGCTGAATCACAGGGATTTAACGTTTGTTAT AATTATAAAGCTAACTACTCGTTATGCATAGCAGAGGGTTAATATGGTTTGAACTTGTTTCTCATTAGGGCTTCTCTGCT ATCTGTGACCTCACTGTAGCATATTTTGGACTCAGCTGTTCCCTGCCCCAAGTGCGAACCCAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGATCAGACTTACGATTTAAGGCAGTTAAATCCACAGGGAATTGATTTTAGTGCCATCC CTATAGATATTAATGCTATCCGCATGCCATCCCCTTCCGCACTTTCAATGTATAATTTGTGTTCCGCACGTATCAATGCG GTGTGTAATTGATTCCCGCACATATAAGTGCGGTAAAATTGGGTGGCGAGAAAACGAATAGGGTTGGCATTAAAATCAAT TCCCAAATCCATATCAGGTTGAGATTTGGTTAAGAAGTAGACTCAGAACAGGGGAAATGTCCATATATTTATTTCTGCTT GCTTGTAGACAGATTGTTTGAGGTTTAAATTGTGATTCTTTACCCATTTAAGTCTACATTGATGTGCTCTTTAATCACAG AATGGGCTGGCTTTGGATGAGAAAAGCTGTAAAGAAGCAATGAATCTGTTTGGAAAAACCAAGCATATTCTACTGACAAA TGTTTCATCAATGGGGAATGGAACGGTACATAAGTTCATTTTTATTTAAGTGCAAAATATAAATTGTATTGAAGTTTTTT ATTTGAATTGATGAGGTTGTATAATTCTTTTCCAGTCTGAAGATGCAGAGCGGTACTGGTTTGCTTTTATTTTATACTCA GTCAAGAGATTGACTCAGAATAGTGAGGAGAGTGGGCAGGAAGAGGTTGAGAACACTGGGCTGACCTTGTGTCGTATATT GAGAGCAGCGAATCTTAAGTATTTTACTGACTTTTCTTTCTAGCATCTATGATTGAAGTTTACTGGCTTTTTTCCCTACT ATATAAGTTTGTAGATTGTCATATAAGTATATTACTTATTGTTATCATTTATCGTGTATTCAACAGCATTGCAGATTTTT CTAAAGAGCTTTCTCAGTTTGTTGTCAAGGCTGGTCAAATTTTAAGTAATCTATATGGCACGGATTGGGAAAATAGGCTT AAGGTATGACTAAGCAGGGAGTCATGATTACATTTTGCATAGTTTATGTTCATATGTGTGTATCAGCATGTGTGTGATGG TCTCTGTATTTTGTATTCCTTGGAAGCCTTTTTTTTATAAAGCCATTATTTATTTTTCTATGTCTATACCAGGCAAAGGA GATGCATGCCAATGCTACTCAGTTGGAGATCCTTAGCAAGTGAGTGGCCATTGTCTGCATCCACTTCTTAAATTAATGTC TTATGTGGCAATTAGTGCAACATGCGGACATTGCCATATGAGTTTACTTGACATGACATCTTATAACTTTGATGGTTCCA GGTACTATAAACGTATATTTGGAGAATTTTTTGTTGCACCTGATGCAAATGTCGAAAAGAACTCAATTGTTACTGTTCAT GCATCTGATTACCATCGGTTTGGATGGTTACTTTTCTTGGCACTCCGTGCACATGCTTTCAGCCGTTTCATAAACTTGGT GACTTGCACCAATGGTTTAATTTCAATATTGGTAAGTTAGATTCTTGTAGCTTTAGTCTTTTTCAGCATTGGGTTTTCCC TGAATATGTTTCATATCTTTTTCTTTTTCACATAGAAATAGAATAGACTAAAGAGAATTGTTAGAATTTCAAACACTTGA ATTTTTAATAAAATAATTGTTTGGTAACTCTTTTTGTTGTTGGGGGAACAAAGGAAACAATTTCTTACTTGCTGGGTGCA TCTATTACAGGCTATCTTAATTATTCATGTCCCTGCTCGTTTTCGGAATTTCAACATTAACGACTCTTCACGCTTTGGTA ATTGTCGTTGTTCTCCTTTCTTCCCTGCATTTTGTTTAGTTATTCTTGCTCTTTTTCATGGAGGCCTGCTCTATGCTCAC ACACTCATTTACTTGAAGGCTATTTTGGTGGTGGGCTAAAAGTGGCTTCTTCTAATTCTATCAACATTTCTTGCAGTTAA GAAAAGTAGCAAAGGTGTTGACCTCCTCGCTTCACTTTGCAAAATATATAACACTTCAGAAGATGAGTTGAGGAAGACCA TGGAGATAGCCAATAGTTTAATAGCAGATATATTGAAGAAGAAACCTTGTTTGGCATCTGAATGCGAAACTGAAAACCTA GAGAATTTTGATAGAGGTTCACTCGCCTTCTGTCATTGGTTATTCATGCATCATTAATATATAATATCTTAAACTGGTGT TTATTATCCCTCTTTGCAGATAGCTTGACCTATTTTAAAGATCTGATGGAGGAATTGTCTCTGCCATCTAGTTTAAACAT CTTAGAAAAAGACTATGATGTCATGATTCATGACAAGGGTGAACTGGATGAGAGGCTATTCATTAATGAGGATGACAGCC TGCTAGCTTCAGGAACCTTGTCTGGTAGTTCAGTTTCAGCCAGTGGTCTAAAGGTATCTTTAATGCAAAATTTGTTCTAA CATGTAGTTTTATCTTGGATAAGACTAATACCTAAAATTACCTACCTTTGCACTCTGTAGAGGAAATTTGATTCGATAGC ATCGCCTGCTAAGACTGTTATGAGTCCACTCTCACCCCACCGCTCTCCTGCGTCCAGTGCTAATGGCATTCCAGGTAGCA CAAATTCAAAGATGGCAGCCGCCACCCCTGTAAGCACCGCAATGACAACTGCAAAGTGGCTTCGGACTGTCATTTCTCCA CTTGCACCGAAGCCCTCACAAGAGCTAGAGCGATTCTTGGCATCATGTGACAGGGACATTACTAGTGATGTGGTGCGCAG AACTCTGATTATATTGCAGGCTATTTTTCCTAGTAGTCCTCTTGGGGAACGATGTGTAACTGGAGGCCTGCAAAGTGCAA ATCTCATGGACAATATATGGGCCGAACAGCGAAGATTGGAAGCACTAAAGTTATACTATAGGGTATTGGAGGCAATGTGC AGAGCAGAAGCCCAAACACTTCATGCAACTAATTTAACTTCTCTACTTACTAATGAGAGGTTTCATAGGTGTATGCTCGC ATGTTCTGCAGAATTGGTCCTGGCAACTCACAAGACTGTAACAATGTTGTTCCCTGCAGTACTGGAGAGGACTGGGATTA CAGCTTTTGATCTGAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCCCTCCCCAGAGAATTGAGGCGACATCTG AATTCATTGGAAGAACGACTGTTGGAGAGCATGGTATGGGAAAAGGGTTCCTCAATGTATAATTCTTTGGCAGTTGCTAG ACCTGCCCTTTCTGCAGAAATCAATCGTCTTGGACTGTTAGCTGAACCAATGCCATCACTGGATGAGATTGCAATAAATA TTAACTTTTCTTATGGAGGGCTGCCTCCTGTTCCTACCTTGCCTAAATTTGAGACTTCACCAAGTAATGGCTCTCTGTCT CTCAGTTTGAAGATTTTAAGTCACATTTTTCTCTCTTCATATAATTCTTAGTTCATCATTGCATAAAGTTGTTGCCATGG ATATCTATTAAGATCTATAAATTTGTTCCTTCTCCATTCTCCCTTCACACCTTTTCTTTCTCAAAGAGCACATGTTCAAA AATACATATTTTTTCAATTTCATTAACATGTCTATCATTGAAATGATTTCAGTTCAAAATGGGGATACCAGATCACCAAA GCGTCTCTGTACAGAACATCGAAATGTGTTAGTGGAACGTAATTCTTTCGCTTCACCAGTAAAAGATCGGCTTCTTCCCT TCAGCAACCTTAAGTCAAAGCTACCACCTCCACCTCCTTTGCAGTCAGCATTTGCCAGGTATAACTTTGATGAGTCTGGA AGTAGCTATCTTTGTAATTTTTCATTATTTTGACTTTTCACCACTTTGCTGTTGCCCTCTTTTGATGCTTTGTTGAATGT TTATTTCCGATAGTCCAACAAAACCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAACATCTTTTTT GGCAAGGTATTTGGACTTTCATCATACTCTTATAACCTTGATTGTTAAAAGGACTTGTGAGCTATATGTTACACAGTTTT GTCATTAAAAGTTCATTTCATAACTAATTTTTTTAATTTAGTGGGCCCATAAGTTGCCTCTTGGAATTGGATTATTACAT TACATCACGTCCACTTGAGTTATTACATCCTTGTTCTGATTCATGTGCTCGTTTAAGATTTAATGATTTGTTGCTTCTCT GGTTCATTTTAAGCACTAAAACTTGTGTACACTTCCTTTGTTTCCTAGATTATTAAGTTGGGAGCAGTCAGAATAAGTGG CATGGTTGAAAGGCTACAATTGTCCCAGCAGATAAGGGAGAATGTATACTGTCTTTTCCAGCGGATCCTAAATCAATGGA CATCTCTTTTCTTCAACCGCCATATTGATCAAATCATTTTGTGTTGCTTCTACGGAGTTGCAAAGGTTTCTCTTGAGGCT TAGAAACTTGATATTGCCATGTGTGTTTCTTCGATTATCTTTCTTCATTCCATACTCTTTTGCAGATTTCACAACTGAGC CTAACCTTTAGGGAGATTATATACAACTACAGAAAGCAACCTCATTGCAAACCCCAAGTTTTTCGCAGTGTATTTGTTGA TTGGTCATCGGCACGCCGTAATGGAGCATGTAAACAGAGAATAGGACAGGATCATGTCGACATCATTTCATTTTACAATG AAGTTTTCATTCCATCTGTAAAGCCACTGCTGGTTGAACTTGGCCCTGGTGGAGCAACCATGAAAAGTGACCGAAAGCCT GAAGTTAATAAAAATGACGGTACTTGCTTATTAGCTAAACTGAAAGTAATTATATTCATGACTTCTATTGCTATGCTAGT TCCGCACTCCATTATTGGCTTGTATGCTTTTCTCTTTCCAGCTCACTGTCCCGGGTCTCCTAAAATATCACCTTTTCCAA GCCTCCCGGATATGTCCCCCAAAAAAGTGTCTGCCTCACACAATGTTTATGTCTCTCCGTTACGATCGTCTAAGGTACAT ATTTATTTGCCTGGCTTTCTTCTTTGGACTATCTGACATTGTACTGTAGAAGGAAGGAGCATGTGAGGACTGTAATTGTT GTGCAATAGTGCTGTTACTAACATGATGCGGTTATAACTTGTCCTCAGGCTCACTACATAACACTTAAGCATATAGTTGA AATGGAAAATTTTGTTTTATTTTATGTAATATAAGTGCATTCATTGTTTATGTGCACACACAGATGGATGCTCTAATATC ACATAGCTCAAAAAGCTATTATGCATGTGTTGGGGAGAGCACTCATGCATATCAGAGCCCTTCAAAAGACCTGACCGCAA TCAATAACCGTTTGAATGGGTATGCATGCTACTTTCTCTGTTTTTACCTTTGAGAGTTACATGCATTACCAAAAAAACAT GATGTCCTAATTTAATCTGTCACTGTTTTCAGCAACCGCAAGGTCCGAGGTGCCCTCAATTTTGATGATGCGGATGTGGG TTTGGTTAGTGACTCTATGGTTGCAAACAGCCTCTATCAGCAGAATGGTAGCTCTGGATCATCTTCAGGTGCACCATTGA AGTCTGAACTACTAGACTCTTGAATTCAAACAATGTTGTGTATATTCTGTACTTGTCCATGTTCTAAAACTTGTGTTCAT ACTAAAATATGATAGGGGGGCATTGTATGAGCGGTGAGATTGTAGAATGCCGCCACTACCCCCGTGTACTTTTGATCATA TTAGGTGTTTTGTGCAAAAAATCTAGGACTCTTATTAGCTAATCAATAAAAAAGAAAACCTTTTGAAAATGCTGAGAAAT ATTACTATGCTCTCTACATTGCACATGTTCGTAACTTTTTTTTGTTAGGGAATTAGGAATGGATTTTTTCAGGTGAAACT TCCAGTCACATGATGGGTGGGGCTTTATCAAAATTTGTGAAAATCTATGAAGAGTGGATTTAGTAAATGGCTGGCTCAGA AAAAGTGAGAACCGAGAAGAGTACAGTTTAAGAGTTTGAGATACATTGATATTTTATTGGAGATTCAAGGCATAGTGATG CAATCTCATTGAAGAATTATAGACTATAGTCGATTTATCTAGATAGAAATCGAGAGTGAAGCTTAAAAGTGGC
CDS sequence (LotjaGi3g1v0315700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTCCTCCAGCTGCAGCTGACATGGAAGATGTCAAGCCTTCTGTTGATAATGCCGACCAAGCTGACTCCCGCTTCGC TGACTTTTGCAAGAATGGGCTGGCTTTGGATGAGAAAAGCTGTAAAGAAGCAATGAATCTGTTTGGAAAAACCAAGCATA TTCTACTGACAAATGTTTCATCAATGGGGAATGGAACGTCTGAAGATGCAGAGCGGTACTGGTTTGCTTTTATTTTATAC TCAGTCAAGAGATTGACTCAGAATAGTGAGGAGAGTGGGCAGGAAGAGGTTGAGAACACTGGGCTGACCTTGTGTCGTAT ATTGAGAGCAGCGAATCTTAACATTGCAGATTTTTCTAAAGAGCTTTCTCAGTTTGTTGTCAAGGCTGGTCAAATTTTAA GTAATCTATATGGCACGGATTGGGAAAATAGGCTTAAGGCAAAGGAGATGCATGCCAATGCTACTCAGTTGGAGATCCTT AGCAAGTACTATAAACGTATATTTGGAGAATTTTTTGTTGCACCTGATGCAAATGTCGAAAAGAACTCAATTGTTACTGT TCATGCATCTGATTACCATCGGTTTGGATGGTTACTTTTCTTGGCACTCCGTGCACATGCTTTCAGCCGTTTCATAAACT TGGTGACTTGCACCAATGGTTTAATTTCAATATTGGCTATCTTAATTATTCATGTCCCTGCTCGTTTTCGGAATTTCAAC ATTAACGACTCTTCACGCTTTGTTAAGAAAAGTAGCAAAGGTGTTGACCTCCTCGCTTCACTTTGCAAAATATATAACAC TTCAGAAGATGAGTTGAGGAAGACCATGGAGATAGCCAATAGTTTAATAGCAGATATATTGAAGAAGAAACCTTGTTTGG CATCTGAATGCGAAACTGAAAACCTAGAGAATTTTGATAGAGATAGCTTGACCTATTTTAAAGATCTGATGGAGGAATTG TCTCTGCCATCTAGTTTAAACATCTTAGAAAAAGACTATGATGTCATGATTCATGACAAGGGTGAACTGGATGAGAGGCT ATTCATTAATGAGGATGACAGCCTGCTAGCTTCAGGAACCTTGTCTGGTAGTTCAGTTTCAGCCAGTGGTCTAAAGAGGA AATTTGATTCGATAGCATCGCCTGCTAAGACTGTTATGAGTCCACTCTCACCCCACCGCTCTCCTGCGTCCAGTGCTAAT GGCATTCCAGGTAGCACAAATTCAAAGATGGCAGCCGCCACCCCTGTAAGCACCGCAATGACAACTGCAAAGTGGCTTCG GACTGTCATTTCTCCACTTGCACCGAAGCCCTCACAAGAGCTAGAGCGATTCTTGGCATCATGTGACAGGGACATTACTA GTGATGTGGTGCGCAGAACTCTGATTATATTGCAGGCTATTTTTCCTAGTAGTCCTCTTGGGGAACGATGTGTAACTGGA GGCCTGCAAAGTGCAAATCTCATGGACAATATATGGGCCGAACAGCGAAGATTGGAAGCACTAAAGTTATACTATAGGGT ATTGGAGGCAATGTGCAGAGCAGAAGCCCAAACACTTCATGCAACTAATTTAACTTCTCTACTTACTAATGAGAGGTTTC ATAGGTGTATGCTCGCATGTTCTGCAGAATTGGTCCTGGCAACTCACAAGACTGTAACAATGTTGTTCCCTGCAGTACTG GAGAGGACTGGGATTACAGCTTTTGATCTGAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCCCTCCCCAGAGA ATTGAGGCGACATCTGAATTCATTGGAAGAACGACTGTTGGAGAGCATGGTATGGGAAAAGGGTTCCTCAATGTATAATT CTTTGGCAGTTGCTAGACCTGCCCTTTCTGCAGAAATCAATCGTCTTGGACTGTTAGCTGAACCAATGCCATCACTGGAT GAGATTGCAATAAATATTAACTTTTCTTATGGAGGGCTGCCTCCTGTTCCTACCTTGCCTAAATTTGAGACTTCACCAAT TCAAAATGGGGATACCAGATCACCAAAGCGTCTCTGTACAGAACATCGAAATGTGTTAGTGGAACGTAATTCTTTCGCTT CACCAGTAAAAGATCGGCTTCTTCCCTTCAGCAACCTTAAGTCAAAGCTACCACCTCCACCTCCTTTGCAGTCAGCATTT GCCAGTCCAACAAAACCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAACATCTTTTTTGGCAAGAT TATTAAGTTGGGAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTACAATTGTCCCAGCAGATAAGGGAGAATGTATACT GTCTTTTCCAGCGGATCCTAAATCAATGGACATCTCTTTTCTTCAACCGCCATATTGATCAAATCATTTTGTGTTGCTTC TACGGAGTTGCAAAGATTTCACAACTGAGCCTAACCTTTAGGGAGATTATATACAACTACAGAAAGCAACCTCATTGCAA ACCCCAAGTTTTTCGCAGTGTATTTGTTGATTGGTCATCGGCACGCCGTAATGGAGCATGTAAACAGAGAATAGGACAGG ATCATGTCGACATCATTTCATTTTACAATGAAGTTTTCATTCCATCTGTAAAGCCACTGCTGGTTGAACTTGGCCCTGGT GGAGCAACCATGAAAAGTGACCGAAAGCCTGAAGTTAATAAAAATGACGCTCACTGTCCCGGGTCTCCTAAAATATCACC TTTTCCAAGCCTCCCGGATATGTCCCCCAAAAAAGTGTCTGCCTCACACAATGTTTATGTCTCTCCGTTACGATCGTCTA AGATGGATGCTCTAATATCACATAGCTCAAAAAGCTATTATGCATGTGTTGGGGAGAGCACTCATGCATATCAGAGCCCT TCAAAAGACCTGACCGCAATCAATAACCGTTTGAATGGCAACCGCAAGGTCCGAGGTGCCCTCAATTTTGATGATGCGGA TGTGGGTTTGGTTAGTGACTCTATGGTTGCAAACAGCCTCTATCAGCAGAATGGTAGCTCTGGATCATCTTCAGGTGCAC CATTGAAGTCTGAACTACTAGACTCTTGA
Protein sequence (LotjaGi3g1v0315700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPPAAADMEDVKPSVDNADQADSRFADFCKNGLALDEKSCKEAMNLFGKTKHILLTNVSSMGNGTSEDAERYWFAFILY SVKRLTQNSEESGQEEVENTGLTLCRILRAANLNIADFSKELSQFVVKAGQILSNLYGTDWENRLKAKEMHANATQLEIL SKYYKRIFGEFFVAPDANVEKNSIVTVHASDYHRFGWLLFLALRAHAFSRFINLVTCTNGLISILAILIIHVPARFRNFN INDSSRFVKKSSKGVDLLASLCKIYNTSEDELRKTMEIANSLIADILKKKPCLASECETENLENFDRDSLTYFKDLMEEL SLPSSLNILEKDYDVMIHDKGELDERLFINEDDSLLASGTLSGSSVSASGLKRKFDSIASPAKTVMSPLSPHRSPASSAN GIPGSTNSKMAAATPVSTAMTTAKWLRTVISPLAPKPSQELERFLASCDRDITSDVVRRTLIILQAIFPSSPLGERCVTG GLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQTLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPALSAEINRLGLLAEPMPSLD EIAININFSYGGLPPVPTLPKFETSPIQNGDTRSPKRLCTEHRNVLVERNSFASPVKDRLLPFSNLKSKLPPPPPLQSAF ASPTKPNPGGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNRHIDQIILCCF YGVAKISQLSLTFREIIYNYRKQPHCKPQVFRSVFVDWSSARRNGACKQRIGQDHVDIISFYNEVFIPSVKPLLVELGPG GATMKSDRKPEVNKNDAHCPGSPKISPFPSLPDMSPKKVSASHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSP SKDLTAINNRLNGNRKVRGALNFDDADVGLVSDSMVANSLYQQNGSSGSSSGAPLKSELLDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 210 | 210 | - | – | |
| PANTHER | 6 | 1010 | 1005 | 0.0 | ||
| PANTHER | 6 | 1010 | 1005 | 0.0 | ||
| SMART | 85 | 231 | 147 | 3.4E-39 | ||
| Pfam | 95 | 231 | 137 | 2.8E-30 | ||
| TMHMM | 211 | 233 | 23 | - | – | |
| Phobius | 211 | 232 | 22 | - | – | |
| Phobius | 233 | 1022 | 790 | - | – | |
| MobiDBLite | 385 | 409 | 25 | - | – | |
| MobiDBLite | 390 | 409 | 20 | - | – | |
| Gene3D | 412 | 633 | 222 | 1.4E-58 | – | |
| Pfam | 414 | 615 | 202 | 4.8E-63 | ||
| SMART | 414 | 615 | 202 | 3.1E-90 | ||
| SUPERFAMILY | 422 | 617 | 196 | 8.16E-60 | ||
| MobiDBLite | 709 | 732 | 24 | - | – | |
| Gene3D | 713 | 897 | 185 | 1.3E-45 | – | |
| SUPERFAMILY | 738 | 910 | 173 | 9.64E-45 | ||
| Pfam | 740 | 871 | 132 | 5.2E-40 | ||
| MobiDBLite | 884 | 909 | 26 | - | – | |
| MobiDBLite | 1002 | 1016 | 15 | - | – | |
| MobiDBLite | 1002 | 1022 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | G1/S transition of mitotic cell cycle | The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. | ||
| Biological process | Regulation of cell cycle | Any process that modulates the rate or extent of progression through the cell cycle. |
Expression pattern of LotjaGi3g1v0315700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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