Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0062000 |
| Transcript ID | LotjaGi3g1v0062000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase, putative; TAIR: AT4G39110.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110; TrEMBL-Plants: tr|I1LVC2|I1LVC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0062000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6551749..6554400) extracted from Lotus japonicus Gifu genome v1.2.
CCAGGAGGTATGGGGAAGATAGAAAAAAAACACACCAATTCTGCACCACAACATCATCATTTTCTATCATCCTTATCATC TCTCATGATGATGCCTATCCTCCTGGTCTTTCTTCTCTTGGCCTTAACCTCCCCTGCTTCTGCTTCCTCTGCTTCCATTC CCAAAGATAACTTCCTCATTGATTGTGGTGCAGAAAAAGCACCAACCCTCCCTGATGGAAGACAATTCAAAACAGACCCA CAAGCCAATTCCTTCTTGCAAGCTAATGATGATTTTAAGGTCTCAGCAGAAGGTGTGGATGTTCCTTCACCTATATATTC CAATGCAAGGATCTTCATTCAGGAAGCAAAGTACTCCTTCCATTTGGTTCAGCCAGGTTTTCATTGGGTTAGGCTTCATT TTTACCCTATTAAAAACAATGTATTTGATCTCCAAAAGGCAACTTTCTCTGTGAACACAGATGCATTTGTCCTCCTCCAC AGCTTCAATGTGAACAACAATGAAAAGACAATATTGAAAGAGTATCTCATCAATGCAACAGAACCCCAATTCACATTATC CTTCATTCCTTTGAAAAACTCAGCTGCATTCATCAATGCCATTGAAGTTGTTTCAGCTCCTGATAACCTCATCTTCGACA CCGGCGCCGCCCTTTTCCCTGTTGGGGAATTTTCAGGCCTCACAGGCTATGCTTTTCAACCAGTTTTCAGGCTCAACAAT GGAGGACCTCTGATCACCCCATCAAATGACACCCTTGGAAGAACATGGGAATCTGATGAGCCTTTCCTCACAAACAAGAA TTTGGCTAAAAAAGCCTCAGTGGCTACCAGTGCCATTAAATTCCCAAAAGACACACCAACAATTTCTCCTCTGATTGCAC CACAAACAGTGTATGCCTCAGTCACAGAAATGGGTGATGCTGGTGTGAACCAGCCAAATTTCAATGTCTCATGGAAATTT GATGTGGACACTTCTTTCAGCTACCTTGTTAGGCTCCATTTCTGTGATATTGTGAGCAAAGGGCTTAATGAGCTCTACTT CAATGTCTATGTGAATGGGAAAATGGCAATTAATAGCTTGGATTTGTCTGCTATAAATGGTGAATTGTCAACACCATATT ACAAAGACATCGTGGTGAATGCAACATTGATGTCTGAGGGGCTAACAGTTCAGGTTGGTCCTGCAAATGCTGATGGCGGA AATGCCAATGCTATTCTGAATGGTGTTGAGGTTTTGAAGATAAGCAACTCTGTGAACAGTTTGGATGGAGAATTTGGTGT TGATGGAAGAAAAGCCAGTGGCTCTAACCGCGGGACGGTTGCAGCGGTTGGATTCGCCATGATGTTTGGAGCCTTTGTTG GTCTTGGAGCCATGGTGATCAAGTGGCACAAGAGGCCACAAGATTGGCAAAAGAGAAACAGCTTCTCTTCATGGTTGCTT CCTCTACATGCTGGTGACACAAGCTTCATGAGCAGCAAGACCTCAATGGGGAAAAGCAACATCTACTCCTCATCAATGGG GTTAGGAAGGCTTTTCTCCTTTGCAGAAATCACAGAAGCAACAAAGAATTTTGACTCCAAGAACATCATCGGTGTTGGTG GGTTTGGTAATGTGTATTTGGGTGTGATTGATGAGGGGACTCAAGTGGCAGTGAAAAGAGGAAATCCACAATCAGAACAA GGAATCAATGAGTTCCAAACTGAGATTCAAATGTTGTCTAAACTCAGACACAGGCACTTGGTGTCTTTAATTGGATATTG TGATGAGAATGATGAGATGATTTTGGTTTATGAGTACATGCCTAATGGTCACTTTAGAGACCATCTTTATGGAAAGAACA TGCCTGCCATGTCCTGGAAGCAAAGATTAGATATCTGCATTGGCGCGGCGCGTGGTCTTCATTACCTTCACACTGGAACT GCACAAGGAATCATCCACCGCGACGTGAAGACCACAAACATTCTCCTTGATGAGAATTTCACAGCCAAAGTTTCTGACTT TGGGCTTTCAAAGGATGCACCAATGGGGCAGGGTCATGTGAGCACTGCAGTGAAAGGTAGCTTTGGTTATCTTGACCCTG AGTACTTCAGGAGGCAGCAATTGACTGAGAAATCAGATGTGTACTCATTTGGAGTGGTGCTGTTAGAAGCTTTATGTGCA AGGCCAGCAATTAACCCTCAGCTTCCAAGAGAGCAAGTGAACTTGGCTGATTGGGCTATGCAGTGGAAGAGAAAAGGGCT TCTTGACAAAATCATTGACCCTCTTCTTGTTGGTTCCATTAACCCTGAATCCATGAAGAAGTTTGCTGAGGCTGCTGAGA AGTGTTTGGCTGATCATGGTGTTGATAGGCCTCCAATGGGGGATGTTCTGTGGAACTTGGAGTATGCATTGCAGCTTCAA GAGGCTTTCACACAAGGTAAAGCTGAAGATGAGATCAAATCCTCTGCAGCTTTTCCTACTTCACCTGTTCCTACTCCTAC CACACCTTCTGATGAACATCCACTTCCACCTGCTTCACCTTCTCCTGCTCCTGCTCCTGCTGTTGTTCCTGAAGTGAATA ATAACAATGCTGCTCCAGCTCAAGTTCATGCTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTCAACAACCTT AATGGAAGGTAA
CDS sequence (LotjaGi3g1v0062000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGATAGAAAAAAAACACACCAATTCTGCACCACAACATCATCATTTTCTATCATCCTTATCATCTCTCATGAT GATGCCTATCCTCCTGGTCTTTCTTCTCTTGGCCTTAACCTCCCCTGCTTCTGCTTCCTCTGCTTCCATTCCCAAAGATA ACTTCCTCATTGATTGTGGTGCAGAAAAAGCACCAACCCTCCCTGATGGAAGACAATTCAAAACAGACCCACAAGCCAAT TCCTTCTTGCAAGCTAATGATGATTTTAAGGTCTCAGCAGAAGGTGTGGATGTTCCTTCACCTATATATTCCAATGCAAG GATCTTCATTCAGGAAGCAAAGTACTCCTTCCATTTGGTTCAGCCAGGTTTTCATTGGGTTAGGCTTCATTTTTACCCTA TTAAAAACAATGTATTTGATCTCCAAAAGGCAACTTTCTCTGTGAACACAGATGCATTTGTCCTCCTCCACAGCTTCAAT GTGAACAACAATGAAAAGACAATATTGAAAGAGTATCTCATCAATGCAACAGAACCCCAATTCACATTATCCTTCATTCC TTTGAAAAACTCAGCTGCATTCATCAATGCCATTGAAGTTGTTTCAGCTCCTGATAACCTCATCTTCGACACCGGCGCCG CCCTTTTCCCTGTTGGGGAATTTTCAGGCCTCACAGGCTATGCTTTTCAACCAGTTTTCAGGCTCAACAATGGAGGACCT CTGATCACCCCATCAAATGACACCCTTGGAAGAACATGGGAATCTGATGAGCCTTTCCTCACAAACAAGAATTTGGCTAA AAAAGCCTCAGTGGCTACCAGTGCCATTAAATTCCCAAAAGACACACCAACAATTTCTCCTCTGATTGCACCACAAACAG TGTATGCCTCAGTCACAGAAATGGGTGATGCTGGTGTGAACCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTGGAC ACTTCTTTCAGCTACCTTGTTAGGCTCCATTTCTGTGATATTGTGAGCAAAGGGCTTAATGAGCTCTACTTCAATGTCTA TGTGAATGGGAAAATGGCAATTAATAGCTTGGATTTGTCTGCTATAAATGGTGAATTGTCAACACCATATTACAAAGACA TCGTGGTGAATGCAACATTGATGTCTGAGGGGCTAACAGTTCAGGTTGGTCCTGCAAATGCTGATGGCGGAAATGCCAAT GCTATTCTGAATGGTGTTGAGGTTTTGAAGATAAGCAACTCTGTGAACAGTTTGGATGGAGAATTTGGTGTTGATGGAAG AAAAGCCAGTGGCTCTAACCGCGGGACGGTTGCAGCGGTTGGATTCGCCATGATGTTTGGAGCCTTTGTTGGTCTTGGAG CCATGGTGATCAAGTGGCACAAGAGGCCACAAGATTGGCAAAAGAGAAACAGCTTCTCTTCATGGTTGCTTCCTCTACAT GCTGGTGACACAAGCTTCATGAGCAGCAAGACCTCAATGGGGAAAAGCAACATCTACTCCTCATCAATGGGGTTAGGAAG GCTTTTCTCCTTTGCAGAAATCACAGAAGCAACAAAGAATTTTGACTCCAAGAACATCATCGGTGTTGGTGGGTTTGGTA ATGTGTATTTGGGTGTGATTGATGAGGGGACTCAAGTGGCAGTGAAAAGAGGAAATCCACAATCAGAACAAGGAATCAAT GAGTTCCAAACTGAGATTCAAATGTTGTCTAAACTCAGACACAGGCACTTGGTGTCTTTAATTGGATATTGTGATGAGAA TGATGAGATGATTTTGGTTTATGAGTACATGCCTAATGGTCACTTTAGAGACCATCTTTATGGAAAGAACATGCCTGCCA TGTCCTGGAAGCAAAGATTAGATATCTGCATTGGCGCGGCGCGTGGTCTTCATTACCTTCACACTGGAACTGCACAAGGA ATCATCCACCGCGACGTGAAGACCACAAACATTCTCCTTGATGAGAATTTCACAGCCAAAGTTTCTGACTTTGGGCTTTC AAAGGATGCACCAATGGGGCAGGGTCATGTGAGCACTGCAGTGAAAGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCA GGAGGCAGCAATTGACTGAGAAATCAGATGTGTACTCATTTGGAGTGGTGCTGTTAGAAGCTTTATGTGCAAGGCCAGCA ATTAACCCTCAGCTTCCAAGAGAGCAAGTGAACTTGGCTGATTGGGCTATGCAGTGGAAGAGAAAAGGGCTTCTTGACAA AATCATTGACCCTCTTCTTGTTGGTTCCATTAACCCTGAATCCATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGG CTGATCATGGTGTTGATAGGCCTCCAATGGGGGATGTTCTGTGGAACTTGGAGTATGCATTGCAGCTTCAAGAGGCTTTC ACACAAGGTAAAGCTGAAGATGAGATCAAATCCTCTGCAGCTTTTCCTACTTCACCTGTTCCTACTCCTACCACACCTTC TGATGAACATCCACTTCCACCTGCTTCACCTTCTCCTGCTCCTGCTCCTGCTGTTGTTCCTGAAGTGAATAATAACAATG CTGCTCCAGCTCAAGTTCATGCTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTCAACAACCTTAATGGAAGG TAA
Protein sequence (LotjaGi3g1v0062000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKIEKKHTNSAPQHHHFLSSLSSLMMMPILLVFLLLALTSPASASSASIPKDNFLIDCGAEKAPTLPDGRQFKTDPQAN SFLQANDDFKVSAEGVDVPSPIYSNARIFIQEAKYSFHLVQPGFHWVRLHFYPIKNNVFDLQKATFSVNTDAFVLLHSFN VNNNEKTILKEYLINATEPQFTLSFIPLKNSAAFINAIEVVSAPDNLIFDTGAALFPVGEFSGLTGYAFQPVFRLNNGGP LITPSNDTLGRTWESDEPFLTNKNLAKKASVATSAIKFPKDTPTISPLIAPQTVYASVTEMGDAGVNQPNFNVSWKFDVD TSFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAINSLDLSAINGELSTPYYKDIVVNATLMSEGLTVQVGPANADGGNAN AILNGVEVLKISNSVNSLDGEFGVDGRKASGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLH AGDTSFMSSKTSMGKSNIYSSSMGLGRLFSFAEITEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGIN EFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGKNMPAMSWKQRLDICIGAARGLHYLHTGTAQG IIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPA INPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLADHGVDRPPMGDVLWNLEYALQLQEAF TQGKAEDEIKSSAAFPTSPVPTPTTPSDEHPLPPASPSPAPAPAVVPEVNNNNAAPAQVHAIDDHSGTAMFAQFNNLNGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 45 | 45 | - | – | |
| SignalP_EUK | 1 | 45 | 45 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 30 | 40 | 11 | - | – | |
| PANTHER | 41 | 880 | 840 | 0.0 | – | |
| Phobius | 41 | 45 | 5 | - | – | |
| PANTHER | 41 | 880 | 840 | 0.0 | – | |
| Phobius | 46 | 436 | 391 | - | – | |
| Pfam | 57 | 410 | 354 | 2.2E-37 | ||
| Gene3D | 227 | 413 | 187 | 4.0E-9 | – | |
| Phobius | 437 | 459 | 23 | - | – | |
| Phobius | 460 | 880 | 421 | - | – | |
| Gene3D | 483 | 596 | 114 | 3.9E-35 | – | |
| SUPERFAMILY | 504 | 788 | 285 | 5.8E-78 | ||
| ProSiteProfiles | 521 | 793 | 273 | 36.089 | ||
| SMART | 521 | 793 | 273 | 6.4E-28 | ||
| Pfam | 524 | 717 | 194 | 2.7E-45 | ||
| CDD | 527 | 791 | 265 | 1.01049E-93 | – | |
| ProSitePatterns | 527 | 549 | 23 | - | ||
| Gene3D | 597 | 815 | 219 | 2.3E-56 | – | |
| ProSitePatterns | 641 | 653 | 13 | - | ||
| MobiDBLite | 813 | 848 | 36 | - | – | |
| MobiDBLite | 819 | 844 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0062000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…