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LotjaGi2g1v0330500.1

Overview

Field Value
Gene ID LotjaGi2g1v0330500
Transcript ID LotjaGi2g1v0330500.1
Lotus japonicus genome version Gifu v1.2
Description Receptor kinase; TAIR: AT1G67720.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q8LKZ1|NORK_PEA Nodulation receptor kinase; TrEMBL-Plants: tr|Q8LKX1|Q8LKX1_LOTJA Receptor-like kinase SYMRK; Found in the gene: LotjaGi2g1v0330500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:80612722..80618932) extracted from Lotus japonicus Gifu genome v1.2.

AAAAAAATAAGAATAATAGTGTTTATCATCAATTATTAAACTAGAAAAAAAACATAATTAACAATGGATTTGTACTAATT CAACCTCCAAGTCATCTTCCCTCACTTTCCTAGCTACCTCCTGCAGTTTACAGGCCTGAAGTCAAACCCATATTTTAAGA GTATTCTTTCTTCTAGCTACCTCCATCCAATTGAGCAGTTCTGCAAAATAGCTTCAAATTCTTCCACAAGGGAACGGTTG AACTTTTAATCAAGGTTCCTTTTTTTAAATTCTGGTGTTGTTGGCAAGGCAGAGAATGAAATGGAATTCAGAAGGAATCT TATGGTTCTAGGTGGAAGATGAAAAGTTAGTTGGCATGGCTTCAAGTTCTACAACCCTTTGGGGTAAATTCTCCTTCAGA TTATGATGGAGTTACCAGCTACTAGGATATTAAGTCAGGCTGTGACATGCTTTCTCTGTCTGTATATATTTATCGGATCA GCTTCTGCAACTGAAGGTTAGTAACTTAATACAATAATTCTTTTAGATTGTTATATCTATTACTTGATTTCTTATCCCTT AATCATAGAAAACAACTTGTTTTAACATGAACTCTAGGTAAACATATGATCATAGTTCCTAATGGGGGAAAATAAACTTT TATGCAAGGATGCAGAATTAGAATTAGTAGTTTGATTCTTTCTAGGTCAACATATGACCATAGTTTGCAGAATTAGAATT AAGACCAGTTTGAACAAAAATGAATATGACCTGAGATGTTTTCTCTGCAGGGTTTGAGAGCATAGCGTGCTGTGCTGATT TGAATTACACAGATCCGCTTACCACCTTAAATTACACAACAGATTACACCTGGTTCTCTGATAAAAGAAGTTGCAGAAAA ATACCTGAAACTGAGTTAAGAAATAGAAGCAATGAAAATGTTCGACTGTTCGATATAGATGAGGGGAAGAGATGTTACAA TCTGCCAACAATTAAGAATGGAGTGTATCTGATAAGGGGCACATTTCCATTTGACAGTTTAAATTCTTCCTTCAATGCTT CAATTGGAGTAACACAATTAGGTGCAGTGAGATCATCCAGGCTCCAGGACTTGGAAATAGAGGGAGTTTTTAGAGCTACC AAAGATTACATAGACTTCTGCTTATTGAAGGGGGAGGTTTATCCCTTTATTTCTCAGCTTGAATTAAGGCCATCACCTGA AGAGTACCTACAAGATTTTCCTACCAGTGTTTTAAAACTGATAAGCAGGAACAACCTTGGGGACACTAAAGATGACATCA GGTATGAAATCTACTTTATTTTGAGATAAACACTTGGGGTTAACACATTTTGGTTTCCACTGACGCATCATACTCATACA CAGAGTAGATCATAGATATAAAATCAAAATCTTTTTCTGTAGAGGATATATAATTGCAATTTGTTTGTGCCTGAACATGT TTTCAGACCAGATGAATTTGAGCAACATGATGCATGAACCTTACCTACAAGTGAATAAGATAGCCTATGCTTCACTTATA TATGAAAAATTTTATAAGAAGCAAGTGCACCTTGATATTAACTTTATTTCATTATGATGCAATGAGATGCACCTAAATGA CAAGTTGACAACAATAAAATATCCATCTGTAATATGCTACTCACAACAATTACAAACAATTATCAACTTCAGGTTCCCAG TTGACCAAAGTGACCGAATCTGGAAAGCAAGTTCAATTTCTTCATCTGCTGTTCCTCTGTCTTCCAATGTCAGCAATGTT GATCTCAACGCCAATGTAACGCCGCCCCTAACAGTCCTACAAACAGCTCTAACCGACCCTGAGCGATTGGAGTTCATCCA CACTGACCTTGAGACAGAGGATTATGGATACCGTGTGTTCCTCTACTTCCTTGAATTAGATAGAACTCTACAAGCAGGCC AAAGGGTGTTTGACATATATGTTAACAGTGAGATTAAAAAGGAGAGTTTTGATGTATTGGCTGGAGGGTCAAACTATAGA TACGATGTCTTGGACATTTCAGCCAGTGGATCACTTAATGTAACCTTGGTCAAGGCATCTAAGTCTGAGTTTGGACCCCT TTTGAATGCTTATGAGATCCTGCAGGTGCGACCGTGGATTGAAGAGACAAACCAAACAGATGGTAAGCGTAGTTGAAGGT CCTAGCATCATTTATCTGTTTTACATTCCTTTTTTCTTATTCATCTCTGAACTAACTTCCCCACATTGAACCTTCAATCT TTTCTCACTCTCTTACATTGTTACATAAAAAAATTCCCCTCTTTAGTGGGAGTGATTCAGAAGATGAGAGAAGAATTGTT GTTGCAAAACTCCGGCAATAGAGCGCTGGAGAGTTGGAGCGGAGACCCTTGTATTCTGCTCCCATGGAAAGGAATAGCAT GTGATGGTTCAAATGGTTCATCTGTTATCACTAAGCTGTAAGTCCTTTTCCACCCTTTTCAAAATGTCGGCACATGTATA TCATACTCAGATTATGGCTAATGCATCCATATATGCTTAGCAACCAATCAATATTTCTAGCTATGCAGTTTCTTGTTCTA TTATCCACATTTTCATAAGGGCGTTTAATAATATCTACTATGTTTTATTCATGTTTTTTCAGGGATCTTTCCTCAAGTAA TCTCAAGGGACTAATACCTTCCAGCATTGCTGAGATGACCAACTTAGAAACACTGTATTGCTTCCAAAACTCTCGTTCAG TTGCTTCTGCCTTTATTTTTGGTGGGTAATCTCAGAATCTGGTTTTTGTACATTAATGTAATTATTTGTGATCTGCAGGA ACATAAGCCACAACAGTTTCGATGGTTCTGTCCCCTCATTTCCACTGTCGTCCTTGTTGATATCAGTGTAATTATCCCTT CTCATGCTCAACTATGACCCAAGATGTTACTGTGTGAACTATGTATACTATGCAGTATCCATTGACAAAATCCTTCTAAC TTGATGATTTTGTATACACTTTTTCTATCTTCACTTAGATTCTAATTGCAGAGAAATTTCCTCCTGTTGTTTGTGTCATC AAGAAAACTATCACTGAAACTTTTTCAAATGCTGATTTATTTAAATTTATGGAACAGAGATCTGAGCTACAACGATCTTA TGGGAAAGCTTCCAGAGTCTATTGTCAAACTGCCACATTTAAAATCATTGTAAGTTATATATGTTGACATTCTACTTTAT ACTAGAAAACTATTTATGATAATTGTAAATTGTAAATATACTTTCCACAATACATTTTATTTGTTCCCAGATATTTTGGC TGCAACGAACACATGAGTCCAGAGGATCCAGCAAATATGAACAGTTCACTAATCAATACAGAGTATGAAGTTCTCTGAAA CTAAAGAATAGAAGTTCTAAAATCAATGAAACCAAAATTAATTTTGATTTTCATATTAACATTTCAGTTATGGAAGATGC AAAGGGAAAGAATCCAGATTTGGACAAGTAATTGTTATTGGTGCCATTACATGTGGATCACTTTTGATTACTTTGGCTTT TGGAGTTCTTTTTGTATGCCGCTACAGACAAAAATTAATTCCATGGGAAGGATTTGCTGGAAAGAAGTACCCAATGGAAA CAAGTAGGCCTTATCTTCTCTAATCCTTGATATCCTATGTGTCTCAGAATTCTAAACCAATATTTTTCTTCAACAGATTT GCTTGTCACATATATATTTAACTGAAGCAAATATAGGGTCAAACTAGCATTTCAATCACGGATTTGCACAATATAATGAT AACATGTGTTGCACAAATTTCTACAAAGATGGCTAGAAATAATTTTGCATTCTAACCCTGTACATTTCACATGCCACATC AAGGACAAAAACACTGATTATGATCATGATGTTAGTAATTAGTTTGTGTGCTAGAACATTCTATCATCATGTGTTTGAGG GAAATGTTGATTTTAGCATGTGGTGTTTTGGTCTAATCTATGCTACTGACTGCATATTTTTGACATGTTCTTCTACAAAA ACATGTAGATATAATTTTCTCTTTGCCAAGCAAAGATGATTTCTTCATAAAGTCCGTATCAATTCAAGCATTCACCTTGG AGTATATAGAGGTGGCCACAGAGAGGTACAAAACCTTGATAGGTGAAGGAGGGTTTGGCTCTGTTTACAGGGGTACTCTA AATGATGGCCAAGAAGTGGCGGTGAAAGTGCGGTCAGCGACATCAACTCAGGGAACTCGAGAATTTGATAATGAGGTACA ATAGCACTTCTACTTTATCAGAGCATCAAAATTCCCAAGAAACCTTCCTAATTCAAACTTTTTTGAGGCCAACTTTCTAT GTCTCTGACTAGTGTATGATGCAACTTGCAGCTAAACCTACTTTCAGCAATACAGCATGAGAACCTGGTGCCACTTCTTG GTTACTGTAATGAAAGTGATCAACAAATTCTAGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTATATGGT AAATATAAAATATCCCACAATTCTTTCAGCTAATATATTTTAATATCCTGTAGTTCTAAAAGTGAACTTGACTACAGGGG AACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGCAAGTAATACTGC GATTTATGATTAATTAACTCAGTTGCTGATCTAACAGACTCTACAATTTTCATCTATAACACGTTGGGAGCGCTAGAATG TTTACAAGTTTTTTTTTGGTTGAGCAGGTCTGGCATATCTGCACACATTTCCAGGACGTTCTGTAATACACAGGGACATA AAATCAAGCAATATACTTCTGGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCACAGGA AGGAGATAGTTATGTCTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTAAGTGGACCTCTAGAGCTATG TTCCATATCAGTAAGATTGTAAGACAGTAACTAAAGATTACAAGGGAAAGGGATAGTTATCACGTATTGCTGATCAGTGT GAATTCCAATGAAATGAAGAAGAAACTTACACTCCTAGCTCTATATGTTTCATCTGTTACATAATGCAACTATGAACTGA ACAATTTCACAATAACTGACATTTATCCCTATGCAGGTACTACAAAACCCAGCAACTATCTGAAAAGAGTGATGTTTTCA GCTTTGGTGTGGTCTTGCTTGAAATTGTGAGTGGCCGGGAACCTCTCAACATAAAGAGACCCCGGACTGAGTGGAGCTTG GTTGAATGGGTATGGTCCACGTTCTGATTTCTATTTATTTTTACTGGAATGTAGCAACACACAGAATTGCATTTGCTTAT CCATTTTCGATCCTTTATTAGCATGTTTGGATCAACTTCACTTTCCTCAAAATCAATTTTAGTACCTAGAAGTTTATTCT CCTCATAATTGATTTTGGCTTCAGAATCAATTGTAGAAGGATTTCCAAACAAACATGCACTATATTTAGTAGGCACTAAG AAATAACTTCGCATGCAGGCAACACCATATATCAGAGGGTCAAAGGTGGATGAAATTGTGGATCCTGGCATTAAGGGAGG ATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCTTTCTCAACATACAGACCAAGCA TGGTCGCCATTGTTCGCGAGTTGGAGGATGCTCTCATAATAGAAAACAATGCATCTGAGTACATGAAGTCCATAGACAGC CTTGGAGGATCGAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTCCCCTCAACTACATCTACAGCAGAATCAACCAT CACAACACAGTCCTTGTCTCACCCACAGCCGAGATAGTAAATGCATGAATGGAATTCTTTTGATTCGTTTTTGATAGTCA TGTAACATTCTAAATGGTAAAAGAGAAAAGACTACTTCTTATTGTACTTCCACCCACTCTATGCATCTTGGAACTAAATT TCTCTTGCTCAACCCCATTTTTTGATGGGTGATATGACTAATCTGGGTCAAGTGCAAGTGAAACAACATTGTGAGTTCTA AGGCTATTCATTTGCTAAGTCCAAACTTAACCAGTAAAAATAGGATTGTGATTAGACTAGGACCCTTTAACAATGCATTC AACAGAAATATAGACACTTTGTTTCTAGAAACTTTTTGGTTTTAATTTTTA 

CDS sequence (LotjaGi2g1v0330500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGGAGTTACCAGCTACTAGGATATTAAGTCAGGCTGTGACATGCTTTCTCTGTCTGTATATATTTATCGGATCAGC TTCTGCAACTGAAGGGTTTGAGAGCATAGCGTGCTGTGCTGATTTGAATTACACAGATCCGCTTACCACCTTAAATTACA CAACAGATTACACCTGGTTCTCTGATAAAAGAAGTTGCAGAAAAATACCTGAAACTGAGTTAAGAAATAGAAGCAATGAA AATGTTCGACTGTTCGATATAGATGAGGGGAAGAGATGTTACAATCTGCCAACAATTAAGAATGGAGTGTATCTGATAAG GGGCACATTTCCATTTGACAGTTTAAATTCTTCCTTCAATGCTTCAATTGGAGTAACACAATTAGGTGCAGTGAGATCAT CCAGGCTCCAGGACTTGGAAATAGAGGGAGTTTTTAGAGCTACCAAAGATTACATAGACTTCTGCTTATTGAAGGGGGAG GTTTATCCCTTTATTTCTCAGCTTGAATTAAGGCCATCACCTGAAGAGTACCTACAAGATTTTCCTACCAGTGTTTTAAA ACTGATAAGCAGGAACAACCTTGGGGACACTAAAGATGACATCAGGTTCCCAGTTGACCAAAGTGACCGAATCTGGAAAG CAAGTTCAATTTCTTCATCTGCTGTTCCTCTGTCTTCCAATGTCAGCAATGTTGATCTCAACGCCAATGTAACGCCGCCC CTAACAGTCCTACAAACAGCTCTAACCGACCCTGAGCGATTGGAGTTCATCCACACTGACCTTGAGACAGAGGATTATGG ATACCGTGTGTTCCTCTACTTCCTTGAATTAGATAGAACTCTACAAGCAGGCCAAAGGGTGTTTGACATATATGTTAACA GTGAGATTAAAAAGGAGAGTTTTGATGTATTGGCTGGAGGGTCAAACTATAGATACGATGTCTTGGACATTTCAGCCAGT GGATCACTTAATGTAACCTTGGTCAAGGCATCTAAGTCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGGT GCGACCGTGGATTGAAGAGACAAACCAAACAGATGTGGGAGTGATTCAGAAGATGAGAGAAGAATTGTTGTTGCAAAACT CCGGCAATAGAGCGCTGGAGAGTTGGAGCGGAGACCCTTGTATTCTGCTCCCATGGAAAGGAATAGCATGTGATGGTTCA AATGGTTCATCTGTTATCACTAAGCTGGATCTTTCCTCAAGTAATCTCAAGGGACTAATACCTTCCAGCATTGCTGAGAT GACCAACTTAGAAACACTGAACATAAGCCACAACAGTTTCGATGGTTCTGTCCCCTCATTTCCACTGTCGTCCTTGTTGA TATCAGTAGATCTGAGCTACAACGATCTTATGGGAAAGCTTCCAGAGTCTATTGTCAAACTGCCACATTTAAAATCATTA TATTTTGGCTGCAACGAACACATGAGTCCAGAGGATCCAGCAAATATGAACAGTTCACTAATCAATACAGATTATGGAAG ATGCAAAGGGAAAGAATCCAGATTTGGACAAGTAATTGTTATTGGTGCCATTACATGTGGATCACTTTTGATTACTTTGG CTTTTGGAGTTCTTTTTGTATGCCGCTACAGACAAAAATTAATTCCATGGGAAGGATTTGCTGGAAAGAAGTACCCAATG GAAACAAATATAATTTTCTCTTTGCCAAGCAAAGATGATTTCTTCATAAAGTCCGTATCAATTCAAGCATTCACCTTGGA GTATATAGAGGTGGCCACAGAGAGGTACAAAACCTTGATAGGTGAAGGAGGGTTTGGCTCTGTTTACAGGGGTACTCTAA ATGATGGCCAAGAAGTGGCGGTGAAAGTGCGGTCAGCGACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTAAAC CTACTTTCAGCAATACAGCATGAGAACCTGGTGCCACTTCTTGGTTACTGTAATGAAAGTGATCAACAAATTCTAGTGTA TCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTATATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTA GACTCTCTATTGCTCTTGGTGCAGCTCGAGGTCTGGCATATCTGCACACATTTCCAGGACGTTCTGTAATACACAGGGAC ATAAAATCAAGCAATATACTTCTGGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCACA GGAAGGAGATAGTTATGTCTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTACTACAAAACCCAGCAAC TATCTGAAAAGAGTGATGTTTTCAGCTTTGGTGTGGTCTTGCTTGAAATTGTGAGTGGCCGGGAACCTCTCAACATAAAG AGACCCCGGACTGAGTGGAGCTTGGTTGAATGGGCAACACCATATATCAGAGGGTCAAAGGTGGATGAAATTGTGGATCC TGGCATTAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCTTTCTCAA CATACAGACCAAGCATGGTCGCCATTGTTCGCGAGTTGGAGGATGCTCTCATAATAGAAAACAATGCATCTGAGTACATG AAGTCCATAGACAGCCTTGGAGGATCGAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTCCCCTCAACTACATCTAC AGCAGAATCAACCATCACAACACAGTCCTTGTCTCACCCACAGCCGAGATAG 

Protein sequence (LotjaGi2g1v0330500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMELPATRILSQAVTCFLCLYIFIGSASATEGFESIACCADLNYTDPLTTLNYTTDYTWFSDKRSCRKIPETELRNRSNE NVRLFDIDEGKRCYNLPTIKNGVYLIRGTFPFDSLNSSFNASIGVTQLGAVRSSRLQDLEIEGVFRATKDYIDFCLLKGE VYPFISQLELRPSPEEYLQDFPTSVLKLISRNNLGDTKDDIRFPVDQSDRIWKASSISSSAVPLSSNVSNVDLNANVTPP LTVLQTALTDPERLEFIHTDLETEDYGYRVFLYFLELDRTLQAGQRVFDIYVNSEIKKESFDVLAGGSNYRYDVLDISAS GSLNVTLVKASKSEFGPLLNAYEILQVRPWIEETNQTDVGVIQKMREELLLQNSGNRALESWSGDPCILLPWKGIACDGS NGSSVITKLDLSSSNLKGLIPSSIAEMTNLETLNISHNSFDGSVPSFPLSSLLISVDLSYNDLMGKLPESIVKLPHLKSL YFGCNEHMSPEDPANMNSSLINTDYGRCKGKESRFGQVIVIGAITCGSLLITLAFGVLFVCRYRQKLIPWEGFAGKKYPM ETNIIFSLPSKDDFFIKSVSIQAFTLEYIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELN LLSAIQHENLVPLLGYCNESDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRD IKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIK RPRTEWSLVEWATPYIRGSKVDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSTYRPSMVAIVRELEDALIIENNASEYM KSIDSLGGSNRYSIVIEKRVLPSTTSTAESTITTQSLSHPQPR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK 1 29 29 -
Phobius 1 12 12 -
SignalP_GRAM_POSITIVE 1 29 29 -
Phobius 1 29 29 -
Phobius 13 24 12 -
Phobius 25 29 5 -
PANTHER 28 914 887 1.6E-280
PANTHER 28 914 887 1.6E-280
Phobius 30 517 488 -
Pfam 41 347 307 7.1E-47
Gene3D 193 344 152 3.4E-5
Gene3D 353 509 157 3.7E-24
SUPERFAMILY 379 488 110 6.8E-20
Pfam 429 447 19 0.8
TMHMM 518 540 23 -
Phobius 518 541 24 -
Phobius 542 923 382 -
Gene3D 566 669 104 9.7E-30
SUPERFAMILY 574 866 293 1.62E-75
ProSiteProfiles 594 871 278 37.008
SMART 594 871 278 1.7E-28
Pfam 597 866 270 1.6E-45
CDD 600 867 268 7.65563E-98
ProSitePatterns 600 622 23 -
Gene3D 670 885 216 1.4E-57
ProSitePatterns 716 728 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0330500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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